RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 CLTCL1P53675 1640 aa20.36■□□□□ 0.85
C19orf54-201ENST00000378313 RRP9O43818 475 aaKnown RBP20.36■□□□□ 0.85
C19orf54-201ENST00000378313 TRAK2O60296 914 aa20.36■□□□□ 0.85
C19orf54-201ENST00000378313 RLBP1P12271 317 aa20.36■□□□□ 0.85
C19orf54-201ENST00000378313 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
C19orf54-201ENST00000378313 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
C19orf54-201ENST00000378313 CCDC27Q2M243 656 aa20.34■□□□□ 0.85
C19orf54-201ENST00000378313 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
C19orf54-201ENST00000378313 C22orf23Q9BZE7 217 aa20.34■□□□□ 0.85
C19orf54-201ENST00000378313 DDX11L8A8MPP1 907 aa20.33■□□□□ 0.84
C19orf54-201ENST00000378313 HSP90AA2PQ14568 343 aaPredicted RBP20.33■□□□□ 0.84
C19orf54-201ENST00000378313 NAP1L5Q96NT1 182 aaPredicted RBP20.33■□□□□ 0.84
C19orf54-201ENST00000378313 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
C19orf54-201ENST00000378313 MVPQ14764 893 aaKnown RBP20.3■□□□□ 0.84
C19orf54-201ENST00000378313 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
C19orf54-201ENST00000378313 SBNO2Q9Y2G9 1366 aa20.3■□□□□ 0.84
C19orf54-201ENST00000378313 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
C19orf54-201ENST00000378313 MYOM2P54296 1465 aa20.3■□□□□ 0.84
C19orf54-201ENST00000378313 HSP90AA1P07900 732 aaKnown RBP20.29■□□□□ 0.84
C19orf54-201ENST00000378313 TCP11L2Q8N4U5 519 aa20.29■□□□□ 0.84
C19orf54-201ENST00000378313 TNNQ9UQP3 1299 aa20.29■□□□□ 0.84
C19orf54-201ENST00000378313 NCOA3Q9Y6Q9 1424 aa20.29■□□□□ 0.84
C19orf54-201ENST00000378313 TET3O43151 1660 aa20.29■□□□□ 0.84
C19orf54-201ENST00000378313 MAP3K4Q9Y6R4 1608 aa20.28■□□□□ 0.84
C19orf54-201ENST00000378313 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
C19orf54-201ENST00000378313 GRPEL1Q9HAV7 217 aa20.28■□□□□ 0.84
C19orf54-201ENST00000378313 DEPDC5O75140 1603 aa20.28■□□□□ 0.84
C19orf54-201ENST00000378313 SPRYD3Q8NCJ5 442 aa20.28■□□□□ 0.84
C19orf54-201ENST00000378313 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.84
C19orf54-201ENST00000378313 PLCH2O75038 1416 aa20.27■□□□□ 0.83
C19orf54-201ENST00000378313 ARXQ96QS3 562 aa20.27■□□□□ 0.83
C19orf54-201ENST00000378313 ABCA6Q8N139 1617 aa20.26■□□□□ 0.83
C19orf54-201ENST00000378313 ABCC1P33527 1531 aa20.26■□□□□ 0.83
C19orf54-201ENST00000378313 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
C19orf54-201ENST00000378313 DDIT3P35638 169 aa20.26■□□□□ 0.83
C19orf54-201ENST00000378313 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
C19orf54-201ENST00000378313 HSCBQ8IWL3 235 aa20.26■□□□□ 0.83
C19orf54-201ENST00000378313 ZKSCAN2Q63HK3 967 aa20.25■□□□□ 0.83
C19orf54-201ENST00000378313 MFAP1P55081 439 aaKnown RBP20.24■□□□□ 0.83
C19orf54-201ENST00000378313 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
C19orf54-201ENST00000378313 MORC1Q86VD1 984 aa20.24■□□□□ 0.83
C19orf54-201ENST00000378313 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
C19orf54-201ENST00000378313 SNX21Q969T3 373 aa20.24■□□□□ 0.83
C19orf54-201ENST00000378313 ESPNB1AK53 854 aa20.23■□□□□ 0.83
C19orf54-201ENST00000378313 DZIP1LQ8IYY4 767 aaKnown RBP20.23■□□□□ 0.83
C19orf54-201ENST00000378313 USP32Q8NFA0 1604 aa20.23■□□□□ 0.83
C19orf54-201ENST00000378313 EFCAB2Q5VUJ9 269 aa20.23■□□□□ 0.83
C19orf54-201ENST00000378313 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
C19orf54-201ENST00000378313 CIZ1Q9ULV3 898 aaPredicted RBP20.23■□□□□ 0.83
C19orf54-201ENST00000378313 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
C19orf54-201ENST00000378313 CFAP70Q5T0N1 1121 aa20.22■□□□□ 0.83
C19orf54-201ENST00000378313 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
C19orf54-201ENST00000378313 ADGRL1O94910 1474 aa20.22■□□□□ 0.83
C19orf54-201ENST00000378313 VWDEQ8N2E2 1590 aa20.22■□□□□ 0.83
C19orf54-201ENST00000378313 TRAPPC8Q9Y2L5 1435 aa20.21■□□□□ 0.83
C19orf54-201ENST00000378313 PTMSP20962 102 aa20.21■□□□□ 0.83
C19orf54-201ENST00000378313 RBM25P49756 843 aaKnown RBP20.21■□□□□ 0.83
C19orf54-201ENST00000378313 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
C19orf54-201ENST00000378313 SMC5Q8IY18 1101 aa20.2■□□□□ 0.82
C19orf54-201ENST00000378313 SKOR2Q2VWA4 1001 aaPredicted RBP20.19■□□□□ 0.82
C19orf54-201ENST00000378313 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
C19orf54-201ENST00000378313 NRXN1Q9ULB1 1477 aa20.19■□□□□ 0.82
C19orf54-201ENST00000378313 CFAP53Q96M91 514 aa20.19■□□□□ 0.82
C19orf54-201ENST00000378313 ADGRB2O60241 1585 aa20.19■□□□□ 0.82
C19orf54-201ENST00000378313 DDX19BQ9UMR2 479 aa20.18■□□□□ 0.82
C19orf54-201ENST00000378313 ZFYVE16Q7Z3T8 1539 aa20.17■□□□□ 0.82
C19orf54-201ENST00000378313 GBP4Q96PP9 640 aa20.17■□□□□ 0.82
C19orf54-201ENST00000378313 SETBP1Q9Y6X0 1596 aa20.17■□□□□ 0.82
C19orf54-201ENST00000378313 SPAG9O60271 1321 aaKnown RBP20.17■□□□□ 0.82
C19orf54-201ENST00000378313 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
C19orf54-201ENST00000378313 ERBB4Q15303 1308 aa20.16■□□□□ 0.82
C19orf54-201ENST00000378313 TNPO1Q92973 898 aaKnown RBP20.15■□□□□ 0.82
C19orf54-201ENST00000378313 TRIM44Q96DX7 344 aaPredicted RBP20.15■□□□□ 0.82
C19orf54-201ENST00000378313 KIF1BO60333 1816 aa20.15■□□□□ 0.82
C19orf54-201ENST00000378313 ZC3H13Q5T200 1668 aaKnown RBP20.14■□□□□ 0.82
C19orf54-201ENST00000378313 RAB3GAP1Q15042 981 aa20.14■□□□□ 0.82
C19orf54-201ENST00000378313 TPM2P07951 284 aa20.14■□□□□ 0.81
C19orf54-201ENST00000378313 MTHFSP49914 203 aa20.14■□□□□ 0.81
C19orf54-201ENST00000378313 TRIM27P14373 513 aa20.12■□□□□ 0.81
C19orf54-201ENST00000378313 SMC4Q9NTJ3 1288 aa20.12■□□□□ 0.81
C19orf54-201ENST00000378313 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
C19orf54-201ENST00000378313 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
C19orf54-201ENST00000378313 NSD2O96028 1365 aa20.11■□□□□ 0.81
C19orf54-201ENST00000378313 INO80Q9ULG1 1556 aaPredicted RBP20.11■□□□□ 0.81
C19orf54-201ENST00000378313 GAS2L3Q86XJ1 694 aa20.11■□□□□ 0.81
C19orf54-201ENST00000378313 ARAP3Q8WWN8 1544 aa20.11■□□□□ 0.81
C19orf54-201ENST00000378313 NUCB1Q02818 461 aa20.1■□□□□ 0.81
C19orf54-201ENST00000378313 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
C19orf54-201ENST00000378313 HSP90AB1P08238 724 aaKnown RBP20.09■□□□□ 0.81
C19orf54-201ENST00000378313 SLC12A5Q9H2X9 1139 aa20.09■□□□□ 0.81
C19orf54-201ENST00000378313 ZBTB40Q9NUA8 1239 aa20.09■□□□□ 0.81
C19orf54-201ENST00000378313 QRICH2Q9H0J4 1663 aa20.09■□□□□ 0.81
C19orf54-201ENST00000378313 CCDC173Q0VFZ6 552 aa20.08■□□□□ 0.8
C19orf54-201ENST00000378313 SSH1Q8WYL5 1049 aa20.07■□□□□ 0.8
C19orf54-201ENST00000378313 PPP1R9BQ96SB3 815 aa20.07■□□□□ 0.8
C19orf54-201ENST00000378313 IL16Q14005 1332 aa20.07■□□□□ 0.8
C19orf54-201ENST00000378313 UGGT1Q9NYU2 1555 aa20.07■□□□□ 0.8
C19orf54-201ENST00000378313 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
C19orf54-201ENST00000378313 PUS7Q96PZ0 661 aaKnown RBP20.07■□□□□ 0.8
C19orf54-201ENST00000378313 IBTKQ9P2D0 1353 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms