RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
USP11-204ENST00000377107 ELL2O00472 640 aaPredicted RBP16.57■□□□□ 0.24
USP11-204ENST00000377107 PTPRTO14522 1441 aa16.56■□□□□ 0.24
USP11-204ENST00000377107 RARSP54136 660 aaKnown RBP16.56■□□□□ 0.24
USP11-204ENST00000377107 CD109Q6YHK3 1445 aa16.56■□□□□ 0.24
USP11-204ENST00000377107 TRPM2O94759 1503 aa16.56■□□□□ 0.24
USP11-204ENST00000377107 MADDQ8WXG6 1647 aa16.56■□□□□ 0.24
USP11-204ENST00000377107 PRAM1Q96QH2 718 aa16.56■□□□□ 0.24
USP11-204ENST00000377107 SEC24BO95487 1268 aa16.56■□□□□ 0.24
USP11-204ENST00000377107 FBXO31Q5XUX0 539 aaPredicted RBP16.55■□□□□ 0.24
USP11-204ENST00000377107 UPF2Q9HAU5 1272 aaKnown RBP16.55■□□□□ 0.24
USP11-204ENST00000377107 EXOSC9Q06265 439 aaKnown RBP16.54■□□□□ 0.24
USP11-204ENST00000377107 MYH16Q9H6N6 1097 aa16.54■□□□□ 0.24
USP11-204ENST00000377107 PCDHB15Q9Y5E8 787 aa16.54■□□□□ 0.24
USP11-204ENST00000377107 FRAT2O75474 233 aaPredicted RBP16.54■□□□□ 0.24
USP11-204ENST00000377107 SOX12O15370 315 aa16.53■□□□□ 0.24
USP11-204ENST00000377107 NUTM2FA1L443 756 aa16.52■□□□□ 0.24
USP11-204ENST00000377107 PDE3AQ14432 1141 aa16.52■□□□□ 0.24
USP11-204ENST00000377107 HMOX1P09601 288 aa16.52■□□□□ 0.23
USP11-204ENST00000377107 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.23
USP11-204ENST00000377107 RIPK4P57078 832 aa16.52■□□□□ 0.23
USP11-204ENST00000377107 PDZRN3Q9UPQ7 1066 aa16.52■□□□□ 0.23
USP11-204ENST00000377107 SHROOM2Q13796 1616 aa16.51■□□□□ 0.23
USP11-204ENST00000377107 CABP1Q9NZU7 370 aa16.5■□□□□ 0.23
USP11-204ENST00000377107 MFAP1P55081 439 aaKnown RBP16.49■□□□□ 0.23
USP11-204ENST00000377107 RWDD1Q9H446 243 aaPredicted RBP16.49■□□□□ 0.23
USP11-204ENST00000377107 UHRF1BP1LA0JNW5 1464 aa16.49■□□□□ 0.23
USP11-204ENST00000377107 NPATQ14207 1427 aa16.49■□□□□ 0.23
USP11-204ENST00000377107 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
USP11-204ENST00000377107 PMFBP1Q8TBY8 1022 aa16.49■□□□□ 0.23
USP11-204ENST00000377107 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
USP11-204ENST00000377107 TERF2IPQ9NYB0 399 aa16.49■□□□□ 0.23
USP11-204ENST00000377107 WAPLQ7Z5K2 1190 aa16.48■□□□□ 0.23
USP11-204ENST00000377107 THUMPD2Q9BTF0 503 aaKnown RBP16.48■□□□□ 0.23
USP11-204ENST00000377107 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
USP11-204ENST00000377107 SYNMO15061 1565 aa16.48■□□□□ 0.23
USP11-204ENST00000377107 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
USP11-204ENST00000377107 NPC1L1Q9UHC9 1359 aa16.47■□□□□ 0.23
USP11-204ENST00000377107 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
USP11-204ENST00000377107 BECN1Q14457 450 aa16.46■□□□□ 0.23
USP11-204ENST00000377107 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
USP11-204ENST00000377107 INSRP06213 1382 aa16.46■□□□□ 0.23
USP11-204ENST00000377107 GSE1Q14687 1217 aa16.46■□□□□ 0.23
USP11-204ENST00000377107 USP35Q9P2H5 1018 aa16.46■□□□□ 0.23
USP11-204ENST00000377107 LAMC1P11047 1609 aa16.45■□□□□ 0.22
USP11-204ENST00000377107 KDM5AP29375 1690 aaKnown RBP16.45■□□□□ 0.22
USP11-204ENST00000377107 DIAPH1O60610 1272 aaKnown RBP16.45■□□□□ 0.22
USP11-204ENST00000377107 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
USP11-204ENST00000377107 WDR63Q8IWG1 891 aa16.45■□□□□ 0.22
USP11-204ENST00000377107 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
USP11-204ENST00000377107 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
USP11-204ENST00000377107 SSH1Q8WYL5 1049 aa16.45■□□□□ 0.22
USP11-204ENST00000377107 ESF1Q9H501 851 aaKnown RBP16.45■□□□□ 0.22
USP11-204ENST00000377107 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
USP11-204ENST00000377107 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
USP11-204ENST00000377107 TET3O43151 1660 aa16.43■□□□□ 0.22
USP11-204ENST00000377107 RNF17Q9BXT8 1623 aaKnown RBP16.43■□□□□ 0.22
USP11-204ENST00000377107 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
USP11-204ENST00000377107 FYB1O15117 783 aa16.43■□□□□ 0.22
USP11-204ENST00000377107 ABCA6Q8N139 1617 aa16.42■□□□□ 0.22
USP11-204ENST00000377107 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
USP11-204ENST00000377107 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
USP11-204ENST00000377107 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
USP11-204ENST00000377107 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
USP11-204ENST00000377107 RPGRIP1LQ68CZ1 1315 aa16.41■□□□□ 0.22
USP11-204ENST00000377107 FAM69CQ0P6D2 419 aa16.41■□□□□ 0.22
USP11-204ENST00000377107 LNPKQ9C0E8 428 aa16.41■□□□□ 0.22
USP11-204ENST00000377107 GZF1Q9H116 711 aaPredicted RBP16.41■□□□□ 0.22
USP11-204ENST00000377107 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
USP11-204ENST00000377107 TRIM27P14373 513 aa16.41■□□□□ 0.22
USP11-204ENST00000377107 A0A1W2PP64 1363 aa16.4■□□□□ 0.22
USP11-204ENST00000377107 APBB1O00213 710 aa16.39■□□□□ 0.21
USP11-204ENST00000377107 TMEM57Q8N5G2 664 aa16.39■□□□□ 0.21
USP11-204ENST00000377107 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
USP11-204ENST00000377107 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
USP11-204ENST00000377107 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
USP11-204ENST00000377107 CEP152O94986 1710 aa16.39■□□□□ 0.21
USP11-204ENST00000377107 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
USP11-204ENST00000377107 ANKRD36BQ8N2N9 1353 aa16.37■□□□□ 0.21
USP11-204ENST00000377107 EFCAB6Q5THR3 1501 aa16.37■□□□□ 0.21
USP11-204ENST00000377107 MYOM2P54296 1465 aa16.37■□□□□ 0.21
USP11-204ENST00000377107 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
USP11-204ENST00000377107 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
USP11-204ENST00000377107 KIF1BO60333 1816 aa16.37■□□□□ 0.21
USP11-204ENST00000377107 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
USP11-204ENST00000377107 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
USP11-204ENST00000377107 ATF7IPQ6VMQ6 1270 aa16.36■□□□□ 0.21
USP11-204ENST00000377107 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
USP11-204ENST00000377107 DCTN1Q14203 1278 aa16.35■□□□□ 0.21
USP11-204ENST00000377107 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.35■□□□□ 0.21
USP11-204ENST00000377107 PPRC1Q5VV67 1664 aaKnown RBP16.35■□□□□ 0.21
USP11-204ENST00000377107 HSP90AA1P07900 732 aaKnown RBP16.35■□□□□ 0.21
USP11-204ENST00000377107 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
USP11-204ENST00000377107 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
USP11-204ENST00000377107 POGZQ7Z3K3 1410 aa16.34■□□□□ 0.21
USP11-204ENST00000377107 NME9Q86XW9 330 aa16.34■□□□□ 0.21
USP11-204ENST00000377107 INO80Q9ULG1 1556 aaPredicted RBP16.34■□□□□ 0.21
USP11-204ENST00000377107 IPO8O15397 1037 aaKnown RBP16.34■□□□□ 0.21
USP11-204ENST00000377107 MYOM1P52179 1685 aa16.33■□□□□ 0.21
USP11-204ENST00000377107 PHACTR3Q96KR7 559 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms