RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 KIAA1210Q9ULL0 1709 aa38.89■■■■□ 3.82
COMMD3-201ENST00000376836 ROBO1Q9Y6N7 1651 aa38.89■■■■□ 3.82
COMMD3-201ENST00000376836 DLC1Q96QB1 1528 aa38.88■■■■□ 3.81
COMMD3-201ENST00000376836 CLSPNQ9HAW4 1339 aa38.88■■■■□ 3.81
COMMD3-201ENST00000376836 SAFB2Q14151 953 aaKnown RBP eCLIP38.86■■■■□ 3.81
COMMD3-201ENST00000376836 MST1RQ04912 1400 aa38.85■■■■□ 3.81
COMMD3-201ENST00000376836 NBPF1Q3BBV0 1214 aa38.84■■■■□ 3.81
COMMD3-201ENST00000376836 CCER1Q8TC90 406 aaPredicted RBP38.84■■■■□ 3.81
COMMD3-201ENST00000376836 SOCS7O14512 581 aa38.83■■■■□ 3.81
COMMD3-201ENST00000376836 BRINP3Q76B58 766 aa38.79■■■■□ 3.8
COMMD3-201ENST00000376836 CDC42BPGQ6DT37 1551 aa38.79■■■■□ 3.8
COMMD3-201ENST00000376836 C1orf167Q5SNV9 1468 aa38.76■■■■□ 3.8
COMMD3-201ENST00000376836 ROCK2O75116 1388 aaKnown RBP38.73■■■■□ 3.79
COMMD3-201ENST00000376836 MINK1Q8N4C8 1332 aaPredicted RBP38.7■■■■□ 3.79
COMMD3-201ENST00000376836 NBPF8Q3BBV2 869 aa38.7■■■■□ 3.79
COMMD3-201ENST00000376836 NUTM2FA1L443 756 aa38.69■■■■□ 3.78
COMMD3-201ENST00000376836 TRPM1Q7Z4N2 1603 aa38.69■■■■□ 3.78
COMMD3-201ENST00000376836 ESCO1Q5FWF5 840 aa38.68■■■■□ 3.78
COMMD3-201ENST00000376836 TIMELESSQ9UNS1 1208 aa38.68■■■■□ 3.78
COMMD3-201ENST00000376836 HIRIP3Q9BW71 556 aaPredicted RBP38.67■■■■□ 3.78
COMMD3-201ENST00000376836 ORAI2Q96SN7 254 aa38.66■■■■□ 3.78
COMMD3-201ENST00000376836 PHLPP1O60346 1717 aa38.66■■■■□ 3.78
COMMD3-201ENST00000376836 ARHGEF28Q8N1W1 1705 aaKnown RBP38.65■■■■□ 3.78
COMMD3-201ENST00000376836 AHDC1Q5TGY3 1603 aaPredicted RBP38.62■■■■□ 3.77
COMMD3-201ENST00000376836 EIF3AQ14152 1382 aaKnown RBP38.61■■■■□ 3.77
COMMD3-201ENST00000376836 CENPJQ9HC77 1338 aaPredicted RBP38.6■■■■□ 3.77
COMMD3-201ENST00000376836 CARD11Q9BXL7 1154 aa38.6■■■■□ 3.77
COMMD3-201ENST00000376836 FMN2Q9NZ56 1722 aa38.59■■■■□ 3.77
COMMD3-201ENST00000376836 ADGRB2O60241 1585 aa38.59■■■■□ 3.77
COMMD3-201ENST00000376836 WASLO00401 505 aaPredicted RBP38.59■■■■□ 3.77
COMMD3-201ENST00000376836 GPRASP1Q5JY77 1395 aa38.55■■■■□ 3.76
COMMD3-201ENST00000376836 RALGAPBQ86X10 1494 aa38.55■■■■□ 3.76
COMMD3-201ENST00000376836 DDX17Q92841 729 aaKnown RBP38.54■■■■□ 3.76
COMMD3-201ENST00000376836 JCADQ9P266 1359 aa38.54■■■■□ 3.76
COMMD3-201ENST00000376836 LRRC59Q96AG4 307 aaKnown RBP38.53■■■■□ 3.76
COMMD3-201ENST00000376836 ANKARQ7Z5J8 1434 aa38.53■■■■□ 3.76
COMMD3-201ENST00000376836 COL16A1Q07092 1604 aaPredicted RBP38.52■■■■□ 3.76
COMMD3-201ENST00000376836 NPHP3Q7Z494 1330 aa38.52■■■■□ 3.76
COMMD3-201ENST00000376836 NHSL1Q5SYE7 1610 aa38.51■■■■□ 3.76
COMMD3-201ENST00000376836 PHF8Q9UPP1 1060 aa38.49■■■■□ 3.75
COMMD3-201ENST00000376836 FOXO3O43524 673 aa38.48■■■■□ 3.75
COMMD3-201ENST00000376836 CDK19Q9BWU1 502 aa38.48■■■■□ 3.75
COMMD3-201ENST00000376836 TULP4Q9NRJ4 1543 aa38.46■■■■□ 3.75
COMMD3-201ENST00000376836 SOS2Q07890 1332 aaPredicted RBP38.44■■■■□ 3.74
COMMD3-201ENST00000376836 KIF1AQ12756 1690 aa38.43■■■■□ 3.74
COMMD3-201ENST00000376836 NUDT16Q96DE0 195 aaKnown RBP38.41■■■■□ 3.74
COMMD3-201ENST00000376836 SRPK2P78362 688 aaKnown RBP38.4■■■■□ 3.74
COMMD3-201ENST00000376836 MED1Q15648 1581 aaPredicted RBP38.4■■■■□ 3.74
COMMD3-201ENST00000376836 QRICH2Q9H0J4 1663 aa38.4■■■■□ 3.74
COMMD3-201ENST00000376836 PMFBP1Q8TBY8 1022 aa38.39■■■■□ 3.74
COMMD3-201ENST00000376836 SPATA31A6Q5VVP1 1343 aa38.39■■■■□ 3.74
COMMD3-201ENST00000376836 EVC2Q86UK5 1308 aa38.38■■■■□ 3.73
COMMD3-201ENST00000376836 PRR36Q9H6K5 1346 aa38.38■■■■□ 3.73
COMMD3-201ENST00000376836 PSME1Q06323 249 aa38.38■■■■□ 3.73
COMMD3-201ENST00000376836 RGPD8O14715 1765 aaPredicted RBP38.37■■■■□ 3.73
COMMD3-201ENST00000376836 XPCQ01831 940 aaPredicted RBP38.37■■■■□ 3.73
COMMD3-201ENST00000376836 KRT28Q7Z3Y7 464 aa38.36■■■■□ 3.73
COMMD3-201ENST00000376836 USP32Q8NFA0 1604 aa38.35■■■■□ 3.73
COMMD3-201ENST00000376836 PHF23Q9BUL5 403 aaPredicted RBP38.34■■■■□ 3.73
COMMD3-201ENST00000376836 NGDNQ8NEJ9 315 aaKnown RBP38.33■■■■□ 3.73
COMMD3-201ENST00000376836 CCDC61Q9Y6R9 512 aa38.33■■■■□ 3.73
COMMD3-201ENST00000376836 SHPRHQ149N8 1683 aa38.32■■■■□ 3.72
COMMD3-201ENST00000376836 PXDNQ92626 1479 aa38.31■■■■□ 3.72
COMMD3-201ENST00000376836 CABP2Q9NPB3 220 aa38.31■■■■□ 3.72
COMMD3-201ENST00000376836 ATP7BP35670 1465 aa38.3■■■■□ 3.72
COMMD3-201ENST00000376836 PNPLA6Q8IY17 1366 aa38.29■■■■□ 3.72
COMMD3-201ENST00000376836 NUTM2BA6NNL0 878 aaPredicted RBP38.27■■■■□ 3.72
COMMD3-201ENST00000376836 NUTM2EB1AL46 878 aaPredicted RBP38.27■■■■□ 3.72
COMMD3-201ENST00000376836 MEX3CQ5U5Q3 659 aaKnown RBP38.27■■■■□ 3.72
COMMD3-201ENST00000376836 NUTM2AQ8IVF1 878 aaPredicted RBP38.27■■■■□ 3.72
COMMD3-201ENST00000376836 ITSN1Q15811 1721 aa38.26■■■■□ 3.71
COMMD3-201ENST00000376836 SBNO2Q9Y2G9 1366 aa38.25■■■■□ 3.71
COMMD3-201ENST00000376836 SLC24A1O60721 1099 aa38.25■■■■□ 3.71
COMMD3-201ENST00000376836 SPATA31A3Q5VYP0 1347 aa38.21■■■■□ 3.71
COMMD3-201ENST00000376836 ST20-MTHFSA0A0A6YYL1 179 aa38.21■■■■□ 3.71
COMMD3-201ENST00000376836 PLEKHG3A1L390 1219 aa38.2■■■■□ 3.71
COMMD3-201ENST00000376836 SBNO1A3KN83 1393 aa38.2■■■■□ 3.71
COMMD3-201ENST00000376836 LMOD2Q6P5Q4 547 aa38.19■■■■□ 3.7
COMMD3-201ENST00000376836 PPIP5K1Q6PFW1 1433 aa38.18■■■■□ 3.7
COMMD3-201ENST00000376836 USP47Q96K76 1375 aa38.18■■■■□ 3.7
COMMD3-201ENST00000376836 ACEP12821 1306 aa38.17■■■■□ 3.7
COMMD3-201ENST00000376836 TNS3Q68CZ2 1445 aa38.15■■■■□ 3.7
COMMD3-201ENST00000376836 PAK3O75914 559 aaPredicted RBP38.14■■■■□ 3.7
COMMD3-201ENST00000376836 ATAD2Q6PL18 1390 aa38.14■■■■□ 3.7
COMMD3-201ENST00000376836 CABP1Q9NZU7 370 aa38.13■■■■□ 3.7
COMMD3-201ENST00000376836 TOPAZ1Q8N9V7 1692 aa38.13■■■■□ 3.69
COMMD3-201ENST00000376836 POLR3AO14802 1390 aaPredicted RBP38.13■■■■□ 3.69
COMMD3-201ENST00000376836 ARHGEF10O15013 1369 aa38.13■■■■□ 3.69
COMMD3-201ENST00000376836 LRP6O75581 1613 aa38.12■■■■□ 3.69
COMMD3-201ENST00000376836 COL22A1Q8NFW1 1626 aaPredicted RBP38.08■■■■□ 3.69
COMMD3-201ENST00000376836 ADAMTS2O95450 1211 aa38.08■■■■□ 3.69
COMMD3-201ENST00000376836 HAP1P54257 671 aaPredicted RBP38.08■■■■□ 3.69
COMMD3-201ENST00000376836 TESK2Q96S53 571 aa38.08■■■■□ 3.69
COMMD3-201ENST00000376836 PUS7Q96PZ0 661 aaKnown RBP38.06■■■■□ 3.68
COMMD3-201ENST00000376836 TMF1P82094 1093 aa38.04■■■■□ 3.68
COMMD3-201ENST00000376836 C8orf37Q96NL8 207 aa38.03■■■■□ 3.68
COMMD3-201ENST00000376836 PLEKHG5O94827 1062 aa38.02■■■■□ 3.68
COMMD3-201ENST00000376836 ZNF692Q9BU19 519 aaPredicted RBP38.02■■■■□ 3.68
COMMD3-201ENST00000376836 TMC1Q8TDI8 760 aa38.01■■■■□ 3.68
COMMD3-201ENST00000376836 TRPM3Q9HCF6 1732 aaPredicted RBP38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms