RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 MYOM2P54296 1465 aa19.85■□□□□ 0.77
CLCN6-205ENST00000376492 RRBP1Q9P2E9 1410 aaKnown RBP19.85■□□□□ 0.77
CLCN6-205ENST00000376492 PXDNQ92626 1479 aa19.83■□□□□ 0.76
CLCN6-205ENST00000376492 CDC42BPGQ6DT37 1551 aa19.83■□□□□ 0.76
CLCN6-205ENST00000376492 RPGRIP1LQ68CZ1 1315 aa19.82■□□□□ 0.76
CLCN6-205ENST00000376492 XPCQ01831 940 aaPredicted RBP19.82■□□□□ 0.76
CLCN6-205ENST00000376492 ESCO1Q5FWF5 840 aa19.82■□□□□ 0.76
CLCN6-205ENST00000376492 EP400Q96L91 3159 aa19.82■□□□□ 0.76
CLCN6-205ENST00000376492 PPLO60437 1756 aa19.8■□□□□ 0.76
CLCN6-205ENST00000376492 BCL9LQ86UU0 1499 aa19.8■□□□□ 0.76
CLCN6-205ENST00000376492 NPHP3Q7Z494 1330 aa19.8■□□□□ 0.76
CLCN6-205ENST00000376492 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
CLCN6-205ENST00000376492 FOXO3O43524 673 aa19.78■□□□□ 0.76
CLCN6-205ENST00000376492 FOXD1Q16676 465 aa19.78■□□□□ 0.76
CLCN6-205ENST00000376492 ADGRF5Q8IZF2 1346 aa19.77■□□□□ 0.76
CLCN6-205ENST00000376492 NUTM2FA1L443 756 aa19.77■□□□□ 0.76
CLCN6-205ENST00000376492 WAPLQ7Z5K2 1190 aa19.76■□□□□ 0.75
CLCN6-205ENST00000376492 STK26Q9P289 416 aa19.76■□□□□ 0.75
CLCN6-205ENST00000376492 PLEKHH1Q9ULM0 1364 aa19.74■□□□□ 0.75
CLCN6-205ENST00000376492 TECPR2O15040 1411 aa19.74■□□□□ 0.75
CLCN6-205ENST00000376492 GJD4Q96KN9 370 aaPredicted RBP19.73■□□□□ 0.75
CLCN6-205ENST00000376492 ZRANB1Q9UGI0 708 aa19.73■□□□□ 0.75
CLCN6-205ENST00000376492 LRPPRCP42704 1394 aaKnown RBP19.71■□□□□ 0.75
CLCN6-205ENST00000376492 MARF1Q9Y4F3 1742 aaKnown RBP19.71■□□□□ 0.75
CLCN6-205ENST00000376492 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
CLCN6-205ENST00000376492 SPATA31E1Q6ZUB1 1445 aa19.7■□□□□ 0.74
CLCN6-205ENST00000376492 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
CLCN6-205ENST00000376492 CCDC144AA2RUR9 1427 aa19.69■□□□□ 0.74
CLCN6-205ENST00000376492 RALGAPBQ86X10 1494 aa19.69■□□□□ 0.74
CLCN6-205ENST00000376492 SLIT2O94813 1529 aa19.69■□□□□ 0.74
CLCN6-205ENST00000376492 GLI3P10071 1580 aa19.69■□□□□ 0.74
CLCN6-205ENST00000376492 UNC5CLQ8IV45 518 aa19.68■□□□□ 0.74
CLCN6-205ENST00000376492 SPATA31A3Q5VYP0 1347 aa19.68■□□□□ 0.74
CLCN6-205ENST00000376492 ABCC11Q96J66 1382 aa19.68■□□□□ 0.74
CLCN6-205ENST00000376492 CCDC125Q86Z20 511 aa19.67■□□□□ 0.74
CLCN6-205ENST00000376492 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.67■□□□□ 0.74
CLCN6-205ENST00000376492 PIK3C2GO75747 1445 aa19.67■□□□□ 0.74
CLCN6-205ENST00000376492 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
CLCN6-205ENST00000376492 ANKRD30BQ9BXX2 1392 aa19.66■□□□□ 0.74
CLCN6-205ENST00000376492 KNDC1Q76NI1 1749 aa19.65■□□□□ 0.74
CLCN6-205ENST00000376492 IFT172Q9UG01 1749 aa19.65■□□□□ 0.74
CLCN6-205ENST00000376492 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
CLCN6-205ENST00000376492 YTHDC2Q9H6S0 1430 aaKnown RBP19.64■□□□□ 0.73
CLCN6-205ENST00000376492 KIF1AQ12756 1690 aa19.64■□□□□ 0.73
CLCN6-205ENST00000376492 BLMP54132 1417 aaPredicted RBP19.63■□□□□ 0.73
CLCN6-205ENST00000376492 PLEKHG5O94827 1062 aa19.63■□□□□ 0.73
CLCN6-205ENST00000376492 KRT28Q7Z3Y7 464 aa19.63■□□□□ 0.73
CLCN6-205ENST00000376492 CABLES1Q8TDN4 633 aa19.62■□□□□ 0.73
CLCN6-205ENST00000376492 TNS3Q68CZ2 1445 aa19.61■□□□□ 0.73
CLCN6-205ENST00000376492 DEFB132Q7Z7B7 95 aa19.61■□□□□ 0.73
CLCN6-205ENST00000376492 HAP1P54257 671 aaPredicted RBP19.59■□□□□ 0.73
CLCN6-205ENST00000376492 SEPT12Q8IYM1 358 aa19.59■□□□□ 0.73
CLCN6-205ENST00000376492 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
CLCN6-205ENST00000376492 PHF8Q9UPP1 1060 aa19.58■□□□□ 0.72
CLCN6-205ENST00000376492 VPS72Q15906 364 aa19.57■□□□□ 0.72
CLCN6-205ENST00000376492 BRWD3Q6RI45 1802 aa19.57■□□□□ 0.72
CLCN6-205ENST00000376492 NRXN1Q9ULB1 1477 aa19.56■□□□□ 0.72
CLCN6-205ENST00000376492 SAFB2Q14151 953 aaKnown RBP eCLIP19.56■□□□□ 0.72
CLCN6-205ENST00000376492 PLCH1Q4KWH8 1693 aa19.56■□□□□ 0.72
CLCN6-205ENST00000376492 CFAP70Q5T0N1 1121 aa19.55■□□□□ 0.72
CLCN6-205ENST00000376492 LMOD2Q6P5Q4 547 aa19.55■□□□□ 0.72
CLCN6-205ENST00000376492 C14orf93Q9H972 538 aaKnown RBP19.55■□□□□ 0.72
CLCN6-205ENST00000376492 CCDC9Q9Y3X0 531 aaKnown RBP19.55■□□□□ 0.72
CLCN6-205ENST00000376492 ABCA3Q99758 1704 aa19.54■□□□□ 0.72
CLCN6-205ENST00000376492 PSME1Q06323 249 aa19.54■□□□□ 0.72
CLCN6-205ENST00000376492 SIRT1Q96EB6 747 aa19.54■□□□□ 0.72
CLCN6-205ENST00000376492 PRAM1Q96QH2 718 aa19.54■□□□□ 0.72
CLCN6-205ENST00000376492 RGPD8O14715 1765 aaPredicted RBP19.54■□□□□ 0.72
CLCN6-205ENST00000376492 SBNO1A3KN83 1393 aa19.54■□□□□ 0.72
CLCN6-205ENST00000376492 SF3B2Q13435 895 aaKnown RBP19.52■□□□□ 0.72
CLCN6-205ENST00000376492 ARHGEF10O15013 1369 aa19.52■□□□□ 0.72
CLCN6-205ENST00000376492 NWD2Q9ULI1 1742 aa19.51■□□□□ 0.71
CLCN6-205ENST00000376492 FAM83GA6ND36 823 aa19.51■□□□□ 0.71
CLCN6-205ENST00000376492 ONECUT3O60422 494 aaPredicted RBP19.51■□□□□ 0.71
CLCN6-205ENST00000376492 KRT27Q7Z3Y8 459 aa19.51■□□□□ 0.71
CLCN6-205ENST00000376492 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
CLCN6-205ENST00000376492 DHX57Q6P158 1386 aaKnown RBP19.51■□□□□ 0.71
CLCN6-205ENST00000376492 A0A0G2JS52 829 aa19.48■□□□□ 0.71
CLCN6-205ENST00000376492 MYT1Q01538 1121 aa19.48■□□□□ 0.71
CLCN6-205ENST00000376492 ANKARQ7Z5J8 1434 aa19.48■□□□□ 0.71
CLCN6-205ENST00000376492 NRAPQ86VF7 1730 aa19.46■□□□□ 0.71
CLCN6-205ENST00000376492 FAM98CQ17RN3 349 aaKnown RBP19.46■□□□□ 0.71
CLCN6-205ENST00000376492 POGKQ9P215 609 aa19.46■□□□□ 0.71
CLCN6-205ENST00000376492 DLC1Q96QB1 1528 aa19.46■□□□□ 0.71
CLCN6-205ENST00000376492 ADGRB2O60241 1585 aa19.45■□□□□ 0.7
CLCN6-205ENST00000376492 LRP5O75197 1615 aa19.45■□□□□ 0.7
CLCN6-205ENST00000376492 PSDA5PKW4 1024 aaPredicted RBP19.45■□□□□ 0.7
CLCN6-205ENST00000376492 HIRIP3Q9BW71 556 aaPredicted RBP19.45■□□□□ 0.7
CLCN6-205ENST00000376492 BTG4Q9NY30 223 aa19.45■□□□□ 0.7
CLCN6-205ENST00000376492 TRPM3Q9HCF6 1732 aaPredicted RBP19.44■□□□□ 0.7
CLCN6-205ENST00000376492 ADGRB1O14514 1584 aa19.44■□□□□ 0.7
CLCN6-205ENST00000376492 PRR36Q9H6K5 1346 aa19.43■□□□□ 0.7
CLCN6-205ENST00000376492 BAG6P46379 1132 aa19.42■□□□□ 0.7
CLCN6-205ENST00000376492 FAM182BQ5T319 152 aa19.42■□□□□ 0.7
CLCN6-205ENST00000376492 ALS2Q96Q42 1657 aa19.41■□□□□ 0.7
CLCN6-205ENST00000376492 TRAK1Q9UPV9 953 aa19.41■□□□□ 0.7
CLCN6-205ENST00000376492 MINK1Q8N4C8 1332 aaPredicted RBP19.41■□□□□ 0.7
CLCN6-205ENST00000376492 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
CLCN6-205ENST00000376492 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
CLCN6-205ENST00000376492 COL14A1Q05707 1796 aaKnown RBP19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms