RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 EVC2Q86UK5 1308 aa31.92■■■□□ 2.7
HLA-C-202ENST00000376237 MINK1Q8N4C8 1332 aaPredicted RBP31.92■■■□□ 2.7
HLA-C-202ENST00000376237 PROSER2Q86WR7 435 aaPredicted RBP31.9■■■□□ 2.7
HLA-C-202ENST00000376237 DISP3Q9P2K9 1392 aa31.9■■■□□ 2.7
HLA-C-202ENST00000376237 PUS7Q96PZ0 661 aaKnown RBP31.9■■■□□ 2.7
HLA-C-202ENST00000376237 CCDC7Q96M83 1385 aa31.89■■■□□ 2.7
HLA-C-202ENST00000376237 WASHC2AQ641Q2 1341 aa31.89■■■□□ 2.7
HLA-C-202ENST00000376237 KIF7Q2M1P5 1343 aa31.88■■■□□ 2.69
HLA-C-202ENST00000376237 ZNF335Q9H4Z2 1342 aaPredicted RBP31.87■■■□□ 2.69
HLA-C-202ENST00000376237 NCOA3Q9Y6Q9 1424 aa31.86■■■□□ 2.69
HLA-C-202ENST00000376237 WASLO00401 505 aaPredicted RBP31.84■■■□□ 2.69
HLA-C-202ENST00000376237 ADGRB2O60241 1585 aa31.83■■■□□ 2.69
HLA-C-202ENST00000376237 TULP4Q9NRJ4 1543 aa31.83■■■□□ 2.69
HLA-C-202ENST00000376237 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.83■■■□□ 2.69
HLA-C-202ENST00000376237 STRCP1A6NGW2 1772 aa31.82■■■□□ 2.68
HLA-C-202ENST00000376237 CDK19Q9BWU1 502 aa31.81■■■□□ 2.68
HLA-C-202ENST00000376237 SRPK2P78362 688 aaKnown RBP31.8■■■□□ 2.68
HLA-C-202ENST00000376237 POLR3GLQ9BT43 218 aa31.8■■■□□ 2.68
HLA-C-202ENST00000376237 ADGRL3Q9HAR2 1447 aa31.79■■■□□ 2.68
HLA-C-202ENST00000376237 TMEM94Q12767 1356 aa31.79■■■□□ 2.68
HLA-C-202ENST00000376237 C14orf37Q86TY3 774 aa31.78■■■□□ 2.68
HLA-C-202ENST00000376237 RBM33Q96EV2 1170 aaKnown RBP31.76■■■□□ 2.68
HLA-C-202ENST00000376237 ATAD2Q6PL18 1390 aa31.75■■■□□ 2.67
HLA-C-202ENST00000376237 C19orf44Q9H6X5 657 aa31.75■■■□□ 2.67
HLA-C-202ENST00000376237 CABP2Q9NPB3 220 aa31.75■■■□□ 2.67
HLA-C-202ENST00000376237 LRRC7Q96NW7 1537 aa31.74■■■□□ 2.67
HLA-C-202ENST00000376237 CDC42BPGQ6DT37 1551 aa31.71■■■□□ 2.67
HLA-C-202ENST00000376237 NALCNQ8IZF0 1738 aa31.7■■■□□ 2.67
HLA-C-202ENST00000376237 DDX10Q13206 875 aaKnown RBP31.7■■■□□ 2.66
HLA-C-202ENST00000376237 NINLQ9Y2I6 1382 aa31.68■■■□□ 2.66
HLA-C-202ENST00000376237 DCCP43146 1447 aa31.68■■■□□ 2.66
HLA-C-202ENST00000376237 NUDT16Q96DE0 195 aaKnown RBP31.67■■■□□ 2.66
HLA-C-202ENST00000376237 MSH6P52701 1360 aa31.67■■■□□ 2.66
HLA-C-202ENST00000376237 CCDC61Q9Y6R9 512 aa31.66■■■□□ 2.66
HLA-C-202ENST00000376237 LTBP4Q8N2S1 1624 aa31.65■■■□□ 2.66
HLA-C-202ENST00000376237 ANKARQ7Z5J8 1434 aa31.65■■■□□ 2.66
HLA-C-202ENST00000376237 ATF3P18847 181 aa31.63■■■□□ 2.65
HLA-C-202ENST00000376237 CADPS2Q86UW7 1296 aa31.63■■■□□ 2.65
HLA-C-202ENST00000376237 TMC1Q8TDI8 760 aa31.63■■■□□ 2.65
HLA-C-202ENST00000376237 ATP7BP35670 1465 aa31.62■■■□□ 2.65
HLA-C-202ENST00000376237 PRR36Q9H6K5 1346 aa31.61■■■□□ 2.65
HLA-C-202ENST00000376237 FMN2Q9NZ56 1722 aa31.6■■■□□ 2.65
HLA-C-202ENST00000376237 SLC12A5Q9H2X9 1139 aa31.59■■■□□ 2.65
HLA-C-202ENST00000376237 NUTM2FA1L443 756 aa31.58■■■□□ 2.65
HLA-C-202ENST00000376237 CABP1Q9NZU7 370 aa31.58■■■□□ 2.65
HLA-C-202ENST00000376237 XIRP1Q702N8 1843 aaKnown RBP31.58■■■□□ 2.65
HLA-C-202ENST00000376237 MYOM1P52179 1685 aa31.57■■■□□ 2.64
HLA-C-202ENST00000376237 PANK3Q9H999 370 aa31.56■■■□□ 2.64
HLA-C-202ENST00000376237 PPIP5K1Q6PFW1 1433 aa31.56■■■□□ 2.64
HLA-C-202ENST00000376237 PLEKHG3A1L390 1219 aa31.54■■■□□ 2.64
HLA-C-202ENST00000376237 TERF2IPQ9NYB0 399 aa31.54■■■□□ 2.64
HLA-C-202ENST00000376237 ANKRD36BQ8N2N9 1353 aa31.53■■■□□ 2.64
HLA-C-202ENST00000376237 DIEXFQ68CQ4 756 aaKnown RBP31.53■■■□□ 2.64
HLA-C-202ENST00000376237 USP32Q8NFA0 1604 aa31.53■■■□□ 2.64
HLA-C-202ENST00000376237 HDGFL2Q7Z4V5 671 aaPredicted RBP31.51■■■□□ 2.63
HLA-C-202ENST00000376237 TOPAZ1Q8N9V7 1692 aa31.5■■■□□ 2.63
HLA-C-202ENST00000376237 MST1RQ04912 1400 aa31.49■■■□□ 2.63
HLA-C-202ENST00000376237 ITSN1Q15811 1721 aa31.49■■■□□ 2.63
HLA-C-202ENST00000376237 ZNF692Q9BU19 519 aaPredicted RBP31.49■■■□□ 2.63
HLA-C-202ENST00000376237 C1orf167Q5SNV9 1468 aa31.48■■■□□ 2.63
HLA-C-202ENST00000376237 ESCO1Q5FWF5 840 aa31.47■■■□□ 2.63
HLA-C-202ENST00000376237 PER1O15534 1290 aaPredicted RBP31.46■■■□□ 2.63
HLA-C-202ENST00000376237 CPSF1Q10570 1443 aaKnown RBP31.46■■■□□ 2.63
HLA-C-202ENST00000376237 PHF8Q9UPP1 1060 aa31.45■■■□□ 2.63
HLA-C-202ENST00000376237 CD163L1Q9NR16 1453 aa31.45■■■□□ 2.63
HLA-C-202ENST00000376237 A0A1W2PP64 1363 aa31.44■■■□□ 2.62
HLA-C-202ENST00000376237 KNSTRNQ9Y448 316 aa31.44■■■□□ 2.62
HLA-C-202ENST00000376237 ACEP12821 1306 aa31.43■■■□□ 2.62
HLA-C-202ENST00000376237 POLR3AO14802 1390 aaPredicted RBP31.43■■■□□ 2.62
HLA-C-202ENST00000376237 NGDNQ8NEJ9 315 aaKnown RBP31.43■■■□□ 2.62
HLA-C-202ENST00000376237 PMFBP1Q8TBY8 1022 aa31.43■■■□□ 2.62
HLA-C-202ENST00000376237 SLAIN2Q9P270 581 aa31.43■■■□□ 2.62
HLA-C-202ENST00000376237 CARD14Q9BXL6 1004 aa31.42■■■□□ 2.62
HLA-C-202ENST00000376237 RGPD8O14715 1765 aaPredicted RBP31.41■■■□□ 2.62
HLA-C-202ENST00000376237 ORAI2Q96SN7 254 aa31.4■■■□□ 2.62
HLA-C-202ENST00000376237 IQSEC2Q5JU85 1478 aa31.4■■■□□ 2.62
HLA-C-202ENST00000376237 KTN1Q86UP2 1357 aaKnown RBP31.4■■■□□ 2.62
HLA-C-202ENST00000376237 NSD3Q9BZ95 1437 aa31.37■■■□□ 2.61
HLA-C-202ENST00000376237 EDC4Q6P2E9 1401 aaKnown RBP31.34■■■□□ 2.61
HLA-C-202ENST00000376237 KIF1AQ12756 1690 aa31.34■■■□□ 2.61
HLA-C-202ENST00000376237 USP6P35125 1406 aa31.34■■■□□ 2.61
HLA-C-202ENST00000376237 BRD4O60885 1362 aaPredicted RBP31.34■■■□□ 2.61
HLA-C-202ENST00000376237 NPC1L1Q9UHC9 1359 aa31.34■■■□□ 2.61
HLA-C-202ENST00000376237 CGNL1Q0VF96 1302 aa31.33■■■□□ 2.61
HLA-C-202ENST00000376237 CERKQ8TCT0 537 aa31.33■■■□□ 2.61
HLA-C-202ENST00000376237 AKAP12Q02952 1782 aa31.32■■■□□ 2.6
HLA-C-202ENST00000376237 TOM1O60784 492 aa31.31■■■□□ 2.6
HLA-C-202ENST00000376237 AMER1Q5JTC6 1135 aaPredicted RBP31.31■■■□□ 2.6
HLA-C-202ENST00000376237 BRINP3Q76B58 766 aa31.31■■■□□ 2.6
HLA-C-202ENST00000376237 ANP32CO43423 234 aa31.3■■■□□ 2.6
HLA-C-202ENST00000376237 PSME1Q06323 249 aa31.3■■■□□ 2.6
HLA-C-202ENST00000376237 FOXO3O43524 673 aa31.29■■■□□ 2.6
HLA-C-202ENST00000376237 MON2Q7Z3U7 1717 aa31.29■■■□□ 2.6
HLA-C-202ENST00000376237 NPHP3Q7Z494 1330 aa31.27■■■□□ 2.6
HLA-C-202ENST00000376237 SSH2Q76I76 1423 aa31.27■■■□□ 2.6
HLA-C-202ENST00000376237 NSD2O96028 1365 aa31.27■■■□□ 2.6
HLA-C-202ENST00000376237 TTC21BQ7Z4L5 1316 aa31.26■■■□□ 2.59
HLA-C-202ENST00000376237 TTC21AQ8NDW8 1320 aa31.26■■■□□ 2.59
HLA-C-202ENST00000376237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.24■■■□□ 2.59
HLA-C-202ENST00000376237 FYB1O15117 783 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms