RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 RRP1P56182 461 aaKnown RBP16.19■□□□□ 0.18
UBR4-203ENST00000375225 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
UBR4-203ENST00000375225 MYOM1P52179 1685 aa16.18■□□□□ 0.18
UBR4-203ENST00000375225 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
UBR4-203ENST00000375225 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
UBR4-203ENST00000375225 CEP170BQ9Y4F5 1589 aaPredicted RBP16.18■□□□□ 0.18
UBR4-203ENST00000375225 SLIT1O75093 1534 aa16.18■□□□□ 0.18
UBR4-203ENST00000375225 SETD1AO15047 1707 aaKnown RBP16.17■□□□□ 0.18
UBR4-203ENST00000375225 NGEFQ8N5V2 710 aa16.17■□□□□ 0.18
UBR4-203ENST00000375225 NRXN3Q9Y4C0 1643 aa16.16■□□□□ 0.18
UBR4-203ENST00000375225 PPP2R1AP30153 589 aa16.16■□□□□ 0.18
UBR4-203ENST00000375225 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
UBR4-203ENST00000375225 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
UBR4-203ENST00000375225 SETD1BQ9UPS6 1966 aaKnown RBP16.15■□□□□ 0.18
UBR4-203ENST00000375225 TMEM132EQ6IEE7 984 aa16.15■□□□□ 0.18
UBR4-203ENST00000375225 THEMISQ8N1K5 641 aaPredicted RBP16.15■□□□□ 0.18
UBR4-203ENST00000375225 ARHGAP23Q9P227 1491 aa16.15■□□□□ 0.18
UBR4-203ENST00000375225 TRAK1Q9UPV9 953 aa16.14■□□□□ 0.18
UBR4-203ENST00000375225 EID1Q9Y6B2 187 aa16.14■□□□□ 0.18
UBR4-203ENST00000375225 ERICH6Q7L0X2 663 aa16.14■□□□□ 0.17
UBR4-203ENST00000375225 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.17
UBR4-203ENST00000375225 PLEKHG1Q9ULL1 1385 aa16.13■□□□□ 0.17
UBR4-203ENST00000375225 PTPRMP28827 1452 aa16.12■□□□□ 0.17
UBR4-203ENST00000375225 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
UBR4-203ENST00000375225 DLC1Q96QB1 1528 aa16.11■□□□□ 0.17
UBR4-203ENST00000375225 KNDC1Q76NI1 1749 aa16.1■□□□□ 0.17
UBR4-203ENST00000375225 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
UBR4-203ENST00000375225 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
UBR4-203ENST00000375225 TXNDC2Q86VQ3 553 aa16.09■□□□□ 0.17
UBR4-203ENST00000375225 SALL2Q9Y467 1007 aaPredicted RBP16.09■□□□□ 0.17
UBR4-203ENST00000375225 DIP2AQ14689 1571 aa16.09■□□□□ 0.17
UBR4-203ENST00000375225 ADAMTS8Q9UP79 889 aa16.09■□□□□ 0.17
UBR4-203ENST00000375225 STK26Q9P289 416 aa16.08■□□□□ 0.16
UBR4-203ENST00000375225 LTKP29376 864 aa16.06■□□□□ 0.16
UBR4-203ENST00000375225 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
UBR4-203ENST00000375225 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
UBR4-203ENST00000375225 POGKQ9P215 609 aa16.05■□□□□ 0.16
UBR4-203ENST00000375225 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
UBR4-203ENST00000375225 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
UBR4-203ENST00000375225 TCERG1O14776 1098 aaKnown RBP16.04■□□□□ 0.16
UBR4-203ENST00000375225 CPS1P31327 1500 aa16.04■□□□□ 0.16
UBR4-203ENST00000375225 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
UBR4-203ENST00000375225 METP08581 1390 aa16.03■□□□□ 0.16
UBR4-203ENST00000375225 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
UBR4-203ENST00000375225 POLR3AO14802 1390 aaPredicted RBP16.02■□□□□ 0.16
UBR4-203ENST00000375225 NSD2O96028 1365 aa16.02■□□□□ 0.16
UBR4-203ENST00000375225 NINLQ9Y2I6 1382 aa16.02■□□□□ 0.16
UBR4-203ENST00000375225 TECPR2O15040 1411 aa16.02■□□□□ 0.16
UBR4-203ENST00000375225 MED14O60244 1454 aa16.02■□□□□ 0.16
UBR4-203ENST00000375225 TULP4Q9NRJ4 1543 aa16.02■□□□□ 0.16
UBR4-203ENST00000375225 SENP3-EIF4A1A0A087X0R7 540 aa16.02■□□□□ 0.15
UBR4-203ENST00000375225 CDCA7LQ96GN5 454 aa16.02■□□□□ 0.15
UBR4-203ENST00000375225 ANP32AP39687 249 aaKnown RBP16.01■□□□□ 0.15
UBR4-203ENST00000375225 ANKLE2Q86XL3 938 aa16.01■□□□□ 0.15
UBR4-203ENST00000375225 EXOC6Q8TAG9 804 aa16.01■□□□□ 0.15
UBR4-203ENST00000375225 FAM135BQ49AJ0 1406 aa16.01■□□□□ 0.15
UBR4-203ENST00000375225 SIRT1Q96EB6 747 aa16■□□□□ 0.15
UBR4-203ENST00000375225 MS4A1P11836 297 aa15.99■□□□□ 0.15
UBR4-203ENST00000375225 SAFB2Q14151 953 aaKnown RBP eCLIP15.99■□□□□ 0.15
UBR4-203ENST00000375225 MORC1Q86VD1 984 aa15.99■□□□□ 0.15
UBR4-203ENST00000375225 CFAP53Q96M91 514 aa15.99■□□□□ 0.15
UBR4-203ENST00000375225 TBX22Q9Y458 520 aa15.99■□□□□ 0.15
UBR4-203ENST00000375225 CGNL1Q0VF96 1302 aa15.99■□□□□ 0.15
UBR4-203ENST00000375225 ZNF521Q96K83 1311 aa15.99■□□□□ 0.15
UBR4-203ENST00000375225 NSD3Q9BZ95 1437 aa15.99■□□□□ 0.15
UBR4-203ENST00000375225 E9PSI1 815 aa15.99■□□□□ 0.15
UBR4-203ENST00000375225 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
UBR4-203ENST00000375225 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
UBR4-203ENST00000375225 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
UBR4-203ENST00000375225 DUSP27Q5VZP5 1158 aa15.97■□□□□ 0.15
UBR4-203ENST00000375225 CARD14Q9BXL6 1004 aa15.97■□□□□ 0.15
UBR4-203ENST00000375225 PIK3R4Q99570 1358 aa15.96■□□□□ 0.15
UBR4-203ENST00000375225 SLC26A8Q96RN1 970 aa15.96■□□□□ 0.15
UBR4-203ENST00000375225 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.15
UBR4-203ENST00000375225 ATAD2Q6PL18 1390 aa15.95■□□□□ 0.14
UBR4-203ENST00000375225 ANKRD36BQ8N2N9 1353 aa15.95■□□□□ 0.14
UBR4-203ENST00000375225 PTCH1Q13635 1447 aa15.95■□□□□ 0.14
UBR4-203ENST00000375225 SRPK2P78362 688 aaKnown RBP15.94■□□□□ 0.14
UBR4-203ENST00000375225 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
UBR4-203ENST00000375225 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
UBR4-203ENST00000375225 ADGRB2O60241 1585 aa15.93■□□□□ 0.14
UBR4-203ENST00000375225 WAPLQ7Z5K2 1190 aa15.93■□□□□ 0.14
UBR4-203ENST00000375225 TRMT2AQ8IZ69 625 aaKnown RBP15.93■□□□□ 0.14
UBR4-203ENST00000375225 CRBNQ96SW2 442 aa15.93■□□□□ 0.14
UBR4-203ENST00000375225 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
UBR4-203ENST00000375225 PTPRUQ92729 1446 aa15.92■□□□□ 0.14
UBR4-203ENST00000375225 CHD2O14647 1828 aaKnown RBP15.92■□□□□ 0.14
UBR4-203ENST00000375225 ROBO2Q9HCK4 1378 aa15.92■□□□□ 0.14
UBR4-203ENST00000375225 APAF1O14727 1248 aa15.91■□□□□ 0.14
UBR4-203ENST00000375225 MSH5O43196 834 aa15.91■□□□□ 0.14
UBR4-203ENST00000375225 CENPQQ7L2Z9 268 aaPredicted RBP15.91■□□□□ 0.14
UBR4-203ENST00000375225 RUNDC1Q96C34 613 aa15.91■□□□□ 0.14
UBR4-203ENST00000375225 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
UBR4-203ENST00000375225 AMOTL2Q9Y2J4 779 aa15.91■□□□□ 0.14
UBR4-203ENST00000375225 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
UBR4-203ENST00000375225 CDK19Q9BWU1 502 aa15.9■□□□□ 0.14
UBR4-203ENST00000375225 SLC12A5Q9H2X9 1139 aa15.9■□□□□ 0.14
UBR4-203ENST00000375225 NOP58Q9Y2X3 529 aaKnown RBP15.89■□□□□ 0.13
UBR4-203ENST00000375225 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.88■□□□□ 0.13
UBR4-203ENST00000375225 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms