RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
HSPG2-202ENST00000374676 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
HSPG2-202ENST00000374676 TOM1O60784 492 aa16.1■□□□□ 0.17
HSPG2-202ENST00000374676 CENPJQ9HC77 1338 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-202ENST00000374676 EIF3AQ14152 1382 aaKnown RBP16.1■□□□□ 0.17
HSPG2-202ENST00000374676 UBAP1LF5GYI3 381 aa16.09■□□□□ 0.17
HSPG2-202ENST00000374676 ATF3P18847 181 aa16.09■□□□□ 0.17
HSPG2-202ENST00000374676 SAFB2Q14151 953 aaKnown RBP eCLIP16.09■□□□□ 0.17
HSPG2-202ENST00000374676 CDC42BPGQ6DT37 1551 aa16.07■□□□□ 0.16
HSPG2-202ENST00000374676 ADGRB2O60241 1585 aa16.06■□□□□ 0.16
HSPG2-202ENST00000374676 MINK1Q8N4C8 1332 aaPredicted RBP16.06■□□□□ 0.16
HSPG2-202ENST00000374676 SLAIN2Q9P270 581 aa16.06■□□□□ 0.16
HSPG2-202ENST00000374676 QRICH2Q9H0J4 1663 aa16.05■□□□□ 0.16
HSPG2-202ENST00000374676 USP47Q96K76 1375 aa16.04■□□□□ 0.16
HSPG2-202ENST00000374676 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
HSPG2-202ENST00000374676 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-202ENST00000374676 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-202ENST00000374676 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
HSPG2-202ENST00000374676 MST1RQ04912 1400 aa16.03■□□□□ 0.16
HSPG2-202ENST00000374676 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
HSPG2-202ENST00000374676 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
HSPG2-202ENST00000374676 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
HSPG2-202ENST00000374676 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.16
HSPG2-202ENST00000374676 C1orf167Q5SNV9 1468 aa16.01■□□□□ 0.15
HSPG2-202ENST00000374676 EIF4G2P78344 907 aaKnown RBP eCLIP16■□□□□ 0.15
HSPG2-202ENST00000374676 TESK2Q96S53 571 aa16■□□□□ 0.15
HSPG2-202ENST00000374676 CDK19Q9BWU1 502 aa16■□□□□ 0.15
HSPG2-202ENST00000374676 EVC2Q86UK5 1308 aa15.98■□□□□ 0.15
HSPG2-202ENST00000374676 PIP4K2BP78356 416 aa15.98■□□□□ 0.15
HSPG2-202ENST00000374676 ANKARQ7Z5J8 1434 aa15.98■□□□□ 0.15
HSPG2-202ENST00000374676 RGPD8O14715 1765 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-202ENST00000374676 TULP4Q9NRJ4 1543 aa15.97■□□□□ 0.15
HSPG2-202ENST00000374676 ROBO1Q9Y6N7 1651 aa15.96■□□□□ 0.15
HSPG2-202ENST00000374676 NUTM2FA1L443 756 aa15.96■□□□□ 0.15
HSPG2-202ENST00000374676 HSPA5P11021 654 aaKnown RBP15.96■□□□□ 0.15
HSPG2-202ENST00000374676 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
HSPG2-202ENST00000374676 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
HSPG2-202ENST00000374676 PUS7Q96PZ0 661 aaKnown RBP15.96■□□□□ 0.15
HSPG2-202ENST00000374676 USP32Q8NFA0 1604 aa15.96■□□□□ 0.15
HSPG2-202ENST00000374676 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
HSPG2-202ENST00000374676 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
HSPG2-202ENST00000374676 SRPK2P78362 688 aaKnown RBP15.95■□□□□ 0.14
HSPG2-202ENST00000374676 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
HSPG2-202ENST00000374676 ESCO1Q5FWF5 840 aa15.94■□□□□ 0.14
HSPG2-202ENST00000374676 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
HSPG2-202ENST00000374676 CCDC61Q9Y6R9 512 aa15.94■□□□□ 0.14
HSPG2-202ENST00000374676 ATP7BP35670 1465 aa15.93■□□□□ 0.14
HSPG2-202ENST00000374676 TMF1P82094 1093 aa15.93■□□□□ 0.14
HSPG2-202ENST00000374676 ITSN1Q15811 1721 aa15.92■□□□□ 0.14
HSPG2-202ENST00000374676 PHF8Q9UPP1 1060 aa15.92■□□□□ 0.14
HSPG2-202ENST00000374676 PLEKHG3A1L390 1219 aa15.91■□□□□ 0.14
HSPG2-202ENST00000374676 KIF1AQ12756 1690 aa15.91■□□□□ 0.14
HSPG2-202ENST00000374676 ATAD2Q6PL18 1390 aa15.9■□□□□ 0.14
HSPG2-202ENST00000374676 TOPAZ1Q8N9V7 1692 aa15.9■□□□□ 0.14
HSPG2-202ENST00000374676 CDCA8Q53HL2 280 aa15.9■□□□□ 0.14
HSPG2-202ENST00000374676 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
HSPG2-202ENST00000374676 AHDC1Q5TGY3 1603 aaPredicted RBP15.9■□□□□ 0.14
HSPG2-202ENST00000374676 DISP3Q9P2K9 1392 aa15.88■□□□□ 0.13
HSPG2-202ENST00000374676 NPHP3Q7Z494 1330 aa15.88■□□□□ 0.13
HSPG2-202ENST00000374676 FOXO3O43524 673 aa15.87■□□□□ 0.13
HSPG2-202ENST00000374676 HSPA1LP34931 641 aa15.87■□□□□ 0.13
HSPG2-202ENST00000374676 ILDR1Q86SU0 546 aaPredicted RBP15.87■□□□□ 0.13
HSPG2-202ENST00000374676 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
HSPG2-202ENST00000374676 PPIP5K1Q6PFW1 1433 aa15.86■□□□□ 0.13
HSPG2-202ENST00000374676 PHLPP1O60346 1717 aa15.86■□□□□ 0.13
HSPG2-202ENST00000374676 CABP1Q9NZU7 370 aa15.86■□□□□ 0.13
HSPG2-202ENST00000374676 SOS2Q07890 1332 aaPredicted RBP15.86■□□□□ 0.13
HSPG2-202ENST00000374676 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
HSPG2-202ENST00000374676 NGDNQ8NEJ9 315 aaKnown RBP15.85■□□□□ 0.13
HSPG2-202ENST00000374676 DDX17Q92841 729 aaKnown RBP15.85■□□□□ 0.13
HSPG2-202ENST00000374676 PSME1Q06323 249 aa15.84■□□□□ 0.13
HSPG2-202ENST00000374676 KRT28Q7Z3Y7 464 aa15.84■□□□□ 0.13
HSPG2-202ENST00000374676 ACEP12821 1306 aa15.84■□□□□ 0.13
HSPG2-202ENST00000374676 NINLQ9Y2I6 1382 aa15.84■□□□□ 0.13
HSPG2-202ENST00000374676 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.13
HSPG2-202ENST00000374676 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
HSPG2-202ENST00000374676 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
HSPG2-202ENST00000374676 PXDNQ92626 1479 aa15.83■□□□□ 0.12
HSPG2-202ENST00000374676 C11orf95C9JLR9 678 aaPredicted RBP15.82■□□□□ 0.12
HSPG2-202ENST00000374676 TMC1Q8TDI8 760 aa15.82■□□□□ 0.12
HSPG2-202ENST00000374676 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
HSPG2-202ENST00000374676 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
HSPG2-202ENST00000374676 SBNO1A3KN83 1393 aa15.8■□□□□ 0.12
HSPG2-202ENST00000374676 BRD4O60885 1362 aaPredicted RBP15.8■□□□□ 0.12
HSPG2-202ENST00000374676 CPSF1Q10570 1443 aaKnown RBP15.79■□□□□ 0.12
HSPG2-202ENST00000374676 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
HSPG2-202ENST00000374676 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
HSPG2-202ENST00000374676 SPATA31A3Q5VYP0 1347 aa15.78■□□□□ 0.12
HSPG2-202ENST00000374676 TRPM3Q9HCF6 1732 aaPredicted RBP15.78■□□□□ 0.12
HSPG2-202ENST00000374676 HDGFL2Q7Z4V5 671 aaPredicted RBP15.78■□□□□ 0.12
HSPG2-202ENST00000374676 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
HSPG2-202ENST00000374676 JCADQ9P266 1359 aa15.77■□□□□ 0.12
HSPG2-202ENST00000374676 KIF7Q2M1P5 1343 aa15.77■□□□□ 0.12
HSPG2-202ENST00000374676 USP6P35125 1406 aa15.77■□□□□ 0.11
HSPG2-202ENST00000374676 SSH2Q76I76 1423 aa15.77■□□□□ 0.11
HSPG2-202ENST00000374676 MON2Q7Z3U7 1717 aa15.76■□□□□ 0.11
HSPG2-202ENST00000374676 MYOM1P52179 1685 aa15.76■□□□□ 0.11
HSPG2-202ENST00000374676 TNS3Q68CZ2 1445 aa15.76■□□□□ 0.11
HSPG2-202ENST00000374676 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
HSPG2-202ENST00000374676 ANKRD36BQ8N2N9 1353 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms