RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 CCDC7Q96M83 1385 aa24.48■■□□□ 1.51
C9orf43-202ENST00000374165 TMF1P82094 1093 aa24.47■■□□□ 1.51
C9orf43-202ENST00000374165 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
C9orf43-202ENST00000374165 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.47■■□□□ 1.51
C9orf43-202ENST00000374165 POLR3GLQ9BT43 218 aa24.47■■□□□ 1.51
C9orf43-202ENST00000374165 NWD1Q149M9 1564 aa24.45■■□□□ 1.5
C9orf43-202ENST00000374165 TULP4Q9NRJ4 1543 aa24.44■■□□□ 1.5
C9orf43-202ENST00000374165 ZNF335Q9H4Z2 1342 aaPredicted RBP24.43■■□□□ 1.5
C9orf43-202ENST00000374165 DDX10Q13206 875 aaKnown RBP24.43■■□□□ 1.5
C9orf43-202ENST00000374165 DMRT2Q9Y5R5 561 aa24.41■■□□□ 1.5
C9orf43-202ENST00000374165 CABP2Q9NPB3 220 aa24.39■■□□□ 1.5
C9orf43-202ENST00000374165 EVC2Q86UK5 1308 aa24.39■■□□□ 1.49
C9orf43-202ENST00000374165 CDK19Q9BWU1 502 aa24.38■■□□□ 1.49
C9orf43-202ENST00000374165 PROSER2Q86WR7 435 aaPredicted RBP24.37■■□□□ 1.49
C9orf43-202ENST00000374165 SLC24A1O60721 1099 aa24.37■■□□□ 1.49
C9orf43-202ENST00000374165 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
C9orf43-202ENST00000374165 NKTRP30414 1462 aaKnown RBP24.35■■□□□ 1.49
C9orf43-202ENST00000374165 WASLO00401 505 aaPredicted RBP24.35■■□□□ 1.49
C9orf43-202ENST00000374165 SRPK2P78362 688 aaKnown RBP24.35■■□□□ 1.49
C9orf43-202ENST00000374165 CDCA8Q53HL2 280 aa24.33■■□□□ 1.49
C9orf43-202ENST00000374165 ADGRB2O60241 1585 aa24.32■■□□□ 1.48
C9orf43-202ENST00000374165 TMEM94Q12767 1356 aa24.32■■□□□ 1.48
C9orf43-202ENST00000374165 NUTM2FA1L443 756 aa24.32■■□□□ 1.48
C9orf43-202ENST00000374165 MYOM1P52179 1685 aa24.31■■□□□ 1.48
C9orf43-202ENST00000374165 XIRP1Q702N8 1843 aaKnown RBP24.3■■□□□ 1.48
C9orf43-202ENST00000374165 MIER1Q8N108 512 aa24.29■■□□□ 1.48
C9orf43-202ENST00000374165 C14orf37Q86TY3 774 aa24.28■■□□□ 1.48
C9orf43-202ENST00000374165 SLC12A5Q9H2X9 1139 aa24.28■■□□□ 1.48
C9orf43-202ENST00000374165 ADGRL3Q9HAR2 1447 aa24.28■■□□□ 1.48
C9orf43-202ENST00000374165 PRR36Q9H6K5 1346 aa24.28■■□□□ 1.48
C9orf43-202ENST00000374165 LRRC7Q96NW7 1537 aa24.27■■□□□ 1.48
C9orf43-202ENST00000374165 PUS7Q96PZ0 661 aaKnown RBP24.27■■□□□ 1.48
C9orf43-202ENST00000374165 RGPD8O14715 1765 aaPredicted RBP24.26■■□□□ 1.47
C9orf43-202ENST00000374165 TMC1Q8TDI8 760 aa24.26■■□□□ 1.47
C9orf43-202ENST00000374165 NUDT16Q96DE0 195 aaKnown RBP24.25■■□□□ 1.47
C9orf43-202ENST00000374165 PANK3Q9H999 370 aa24.24■■□□□ 1.47
C9orf43-202ENST00000374165 USP32Q8NFA0 1604 aa24.24■■□□□ 1.47
C9orf43-202ENST00000374165 ATP7BP35670 1465 aa24.23■■□□□ 1.47
C9orf43-202ENST00000374165 CABP1Q9NZU7 370 aa24.23■■□□□ 1.47
C9orf43-202ENST00000374165 C19orf44Q9H6X5 657 aa24.22■■□□□ 1.47
C9orf43-202ENST00000374165 CDC42BPGQ6DT37 1551 aa24.22■■□□□ 1.47
C9orf43-202ENST00000374165 FMN2Q9NZ56 1722 aa24.22■■□□□ 1.47
C9orf43-202ENST00000374165 ATAD2Q6PL18 1390 aa24.22■■□□□ 1.47
C9orf43-202ENST00000374165 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
C9orf43-202ENST00000374165 CCDC61Q9Y6R9 512 aa24.2■■□□□ 1.46
C9orf43-202ENST00000374165 NCOA3Q9Y6Q9 1424 aa24.18■■□□□ 1.46
C9orf43-202ENST00000374165 PER1O15534 1290 aaPredicted RBP24.18■■□□□ 1.46
C9orf43-202ENST00000374165 CARD14Q9BXL6 1004 aa24.18■■□□□ 1.46
C9orf43-202ENST00000374165 PPIP5K1Q6PFW1 1433 aa24.17■■□□□ 1.46
C9orf43-202ENST00000374165 CD163L1Q9NR16 1453 aa24.17■■□□□ 1.46
C9orf43-202ENST00000374165 TOPAZ1Q8N9V7 1692 aa24.16■■□□□ 1.46
C9orf43-202ENST00000374165 A0A1W2PP64 1363 aa24.13■■□□□ 1.45
C9orf43-202ENST00000374165 MSH6P52701 1360 aa24.13■■□□□ 1.45
C9orf43-202ENST00000374165 ATF3P18847 181 aa24.13■■□□□ 1.45
C9orf43-202ENST00000374165 PMFBP1Q8TBY8 1022 aa24.13■■□□□ 1.45
C9orf43-202ENST00000374165 CNGB1Q14028 1251 aaPredicted RBP24.12■■□□□ 1.45
C9orf43-202ENST00000374165 ANKARQ7Z5J8 1434 aa24.12■■□□□ 1.45
C9orf43-202ENST00000374165 ANKRD36BQ8N2N9 1353 aa24.11■■□□□ 1.45
C9orf43-202ENST00000374165 NINLQ9Y2I6 1382 aa24.11■■□□□ 1.45
C9orf43-202ENST00000374165 ORAI2Q96SN7 254 aa24.11■■□□□ 1.45
C9orf43-202ENST00000374165 DCCP43146 1447 aa24.1■■□□□ 1.45
C9orf43-202ENST00000374165 PLEKHG3A1L390 1219 aa24.1■■□□□ 1.45
C9orf43-202ENST00000374165 MST1RQ04912 1400 aa24.09■■□□□ 1.45
C9orf43-202ENST00000374165 ITSN1Q15811 1721 aa24.09■■□□□ 1.45
C9orf43-202ENST00000374165 CADPS2Q86UW7 1296 aa24.09■■□□□ 1.45
C9orf43-202ENST00000374165 ACEP12821 1306 aa24.08■■□□□ 1.45
C9orf43-202ENST00000374165 CPSF1Q10570 1443 aaKnown RBP24.08■■□□□ 1.45
C9orf43-202ENST00000374165 ESCO1Q5FWF5 840 aa24.08■■□□□ 1.45
C9orf43-202ENST00000374165 C1orf167Q5SNV9 1468 aa24.08■■□□□ 1.45
C9orf43-202ENST00000374165 TERF2IPQ9NYB0 399 aa24.08■■□□□ 1.44
C9orf43-202ENST00000374165 NSD3Q9BZ95 1437 aa24.06■■□□□ 1.44
C9orf43-202ENST00000374165 KNSTRNQ9Y448 316 aa24.05■■□□□ 1.44
C9orf43-202ENST00000374165 AKAP12Q02952 1782 aa24.05■■□□□ 1.44
C9orf43-202ENST00000374165 PHF8Q9UPP1 1060 aa24.05■■□□□ 1.44
C9orf43-202ENST00000374165 AMER1Q5JTC6 1135 aaPredicted RBP24.04■■□□□ 1.44
C9orf43-202ENST00000374165 HDGFL2Q7Z4V5 671 aaPredicted RBP24.04■■□□□ 1.44
C9orf43-202ENST00000374165 KTN1Q86UP2 1357 aaKnown RBP24.03■■□□□ 1.44
C9orf43-202ENST00000374165 POLR3AO14802 1390 aaPredicted RBP24.03■■□□□ 1.44
C9orf43-202ENST00000374165 CC2D1BQ5T0F9 858 aaKnown RBP24.02■■□□□ 1.44
C9orf43-202ENST00000374165 NGDNQ8NEJ9 315 aaKnown RBP24.02■■□□□ 1.44
C9orf43-202ENST00000374165 SLAIN2Q9P270 581 aa24.02■■□□□ 1.44
C9orf43-202ENST00000374165 MON2Q7Z3U7 1717 aa24.01■■□□□ 1.43
C9orf43-202ENST00000374165 FOXO3O43524 673 aa24■■□□□ 1.43
C9orf43-202ENST00000374165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24■■□□□ 1.43
C9orf43-202ENST00000374165 ZNF692Q9BU19 519 aaPredicted RBP23.99■■□□□ 1.43
C9orf43-202ENST00000374165 ANP32CO43423 234 aa23.98■■□□□ 1.43
C9orf43-202ENST00000374165 DDX17Q92841 729 aaKnown RBP23.98■■□□□ 1.43
C9orf43-202ENST00000374165 PRKRIP1Q9H875 184 aaPredicted RBP23.98■■□□□ 1.43
C9orf43-202ENST00000374165 USP6P35125 1406 aa23.98■■□□□ 1.43
C9orf43-202ENST00000374165 XPCQ01831 940 aaPredicted RBP23.96■■□□□ 1.43
C9orf43-202ENST00000374165 FYB1O15117 783 aa23.96■■□□□ 1.43
C9orf43-202ENST00000374165 BRINP3Q76B58 766 aa23.96■■□□□ 1.43
C9orf43-202ENST00000374165 EDC4Q6P2E9 1401 aaKnown RBP23.95■■□□□ 1.43
C9orf43-202ENST00000374165 NRKQ7Z2Y5 1582 aa23.95■■□□□ 1.42
C9orf43-202ENST00000374165 SSH2Q76I76 1423 aa23.95■■□□□ 1.42
C9orf43-202ENST00000374165 CGNL1Q0VF96 1302 aa23.94■■□□□ 1.42
C9orf43-202ENST00000374165 GGNBP2Q9H3C7 697 aa23.94■■□□□ 1.42
C9orf43-202ENST00000374165 NME9Q86XW9 330 aa23.93■■□□□ 1.42
C9orf43-202ENST00000374165 ZRANB1Q9UGI0 708 aa23.93■■□□□ 1.42
C9orf43-202ENST00000374165 PSME1Q06323 249 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms