RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 NKTRP30414 1462 aaKnown RBP18.96■□□□□ 0.63
A1CF-202ENST00000373993 ADAMTS13Q76LX8 1427 aa18.96■□□□□ 0.63
A1CF-202ENST00000373993 FAM43AQ8N2R8 423 aa18.94■□□□□ 0.62
A1CF-202ENST00000373993 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
A1CF-202ENST00000373993 DIP2AQ14689 1571 aa18.93■□□□□ 0.62
A1CF-202ENST00000373993 BACH2Q9BYV9 841 aa18.93■□□□□ 0.62
A1CF-202ENST00000373993 C14orf37Q86TY3 774 aa18.92■□□□□ 0.62
A1CF-202ENST00000373993 NRXN3Q9Y4C0 1643 aa18.91■□□□□ 0.62
A1CF-202ENST00000373993 NEXMIFQ5QGS0 1516 aa18.91■□□□□ 0.62
A1CF-202ENST00000373993 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
A1CF-202ENST00000373993 MSH6P52701 1360 aa18.9■□□□□ 0.62
A1CF-202ENST00000373993 GLIPR1L2Q4G1C9 344 aa18.9■□□□□ 0.62
A1CF-202ENST00000373993 PDE4AP27815 886 aa18.89■□□□□ 0.61
A1CF-202ENST00000373993 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
A1CF-202ENST00000373993 ROBO1Q9Y6N7 1651 aa18.87■□□□□ 0.61
A1CF-202ENST00000373993 SETBP1Q9Y6X0 1596 aa18.87■□□□□ 0.61
A1CF-202ENST00000373993 AMOTL2Q9Y2J4 779 aa18.87■□□□□ 0.61
A1CF-202ENST00000373993 PTPRUQ92729 1446 aa18.86■□□□□ 0.61
A1CF-202ENST00000373993 ILDR2Q71H61 639 aa18.86■□□□□ 0.61
A1CF-202ENST00000373993 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
A1CF-202ENST00000373993 SPATA31E1Q6ZUB1 1445 aa18.86■□□□□ 0.61
A1CF-202ENST00000373993 KTN1Q86UP2 1357 aaKnown RBP18.86■□□□□ 0.61
A1CF-202ENST00000373993 MED1Q15648 1581 aaPredicted RBP18.85■□□□□ 0.61
A1CF-202ENST00000373993 PIK3R4Q99570 1358 aa18.84■□□□□ 0.61
A1CF-202ENST00000373993 RTN4Q9NQC3 1192 aaKnown RBP18.84■□□□□ 0.61
A1CF-202ENST00000373993 METP08581 1390 aa18.84■□□□□ 0.61
A1CF-202ENST00000373993 CCDC144AA2RUR9 1427 aa18.84■□□□□ 0.61
A1CF-202ENST00000373993 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.83■□□□□ 0.61
A1CF-202ENST00000373993 PPLO60437 1756 aa18.82■□□□□ 0.6
A1CF-202ENST00000373993 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.82■□□□□ 0.6
A1CF-202ENST00000373993 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
A1CF-202ENST00000373993 XRN1Q8IZH2 1706 aaKnown RBP18.81■□□□□ 0.6
A1CF-202ENST00000373993 FAM135BQ49AJ0 1406 aa18.81■□□□□ 0.6
A1CF-202ENST00000373993 PDE3BQ13370 1112 aa18.81■□□□□ 0.6
A1CF-202ENST00000373993 SLAIN2Q9P270 581 aa18.81■□□□□ 0.6
A1CF-202ENST00000373993 VGFO15240 615 aaPredicted RBP18.79■□□□□ 0.6
A1CF-202ENST00000373993 INSRP06213 1382 aa18.78■□□□□ 0.6
A1CF-202ENST00000373993 ATF3P18847 181 aa18.78■□□□□ 0.6
A1CF-202ENST00000373993 ROCK2O75116 1388 aaKnown RBP18.78■□□□□ 0.6
A1CF-202ENST00000373993 NFKBIBQ15653 356 aa18.77■□□□□ 0.59
A1CF-202ENST00000373993 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.59
A1CF-202ENST00000373993 C19orf44Q9H6X5 657 aa18.77■□□□□ 0.59
A1CF-202ENST00000373993 SETD1AO15047 1707 aaKnown RBP18.76■□□□□ 0.59
A1CF-202ENST00000373993 PHLPP1O60346 1717 aa18.76■□□□□ 0.59
A1CF-202ENST00000373993 NCOA3Q9Y6Q9 1424 aa18.76■□□□□ 0.59
A1CF-202ENST00000373993 RPGRIP1LQ68CZ1 1315 aa18.76■□□□□ 0.59
A1CF-202ENST00000373993 RRP1P56182 461 aaKnown RBP18.76■□□□□ 0.59
A1CF-202ENST00000373993 BRPF3Q9ULD4 1205 aa18.76■□□□□ 0.59
A1CF-202ENST00000373993 LRPPRCP42704 1394 aaKnown RBP18.75■□□□□ 0.59
A1CF-202ENST00000373993 CADPS2Q86UW7 1296 aa18.75■□□□□ 0.59
A1CF-202ENST00000373993 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
A1CF-202ENST00000373993 KIF7Q2M1P5 1343 aa18.75■□□□□ 0.59
A1CF-202ENST00000373993 PKNOX2Q96KN3 472 aa18.74■□□□□ 0.59
A1CF-202ENST00000373993 ADGRF5Q8IZF2 1346 aa18.73■□□□□ 0.59
A1CF-202ENST00000373993 NALCNQ8IZF0 1738 aa18.72■□□□□ 0.59
A1CF-202ENST00000373993 IFT172Q9UG01 1749 aa18.72■□□□□ 0.59
A1CF-202ENST00000373993 EIF5BO60841 1220 aaKnown RBP18.72■□□□□ 0.59
A1CF-202ENST00000373993 PNISRQ8TF01 805 aaKnown RBP18.72■□□□□ 0.59
A1CF-202ENST00000373993 BRD4O60885 1362 aaPredicted RBP18.7■□□□□ 0.58
A1CF-202ENST00000373993 FRAT1Q92837 279 aaPredicted RBP18.7■□□□□ 0.58
A1CF-202ENST00000373993 ROBO2Q9HCK4 1378 aa18.68■□□□□ 0.58
A1CF-202ENST00000373993 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
A1CF-202ENST00000373993 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
A1CF-202ENST00000373993 DAXXQ9UER7 740 aaPredicted RBP18.68■□□□□ 0.58
A1CF-202ENST00000373993 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
A1CF-202ENST00000373993 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
A1CF-202ENST00000373993 DCCP43146 1447 aa18.67■□□□□ 0.58
A1CF-202ENST00000373993 ANKRD30BQ9BXX2 1392 aa18.66■□□□□ 0.58
A1CF-202ENST00000373993 BRINP3Q76B58 766 aa18.66■□□□□ 0.58
A1CF-202ENST00000373993 STK26Q9P289 416 aa18.66■□□□□ 0.58
A1CF-202ENST00000373993 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
A1CF-202ENST00000373993 MST1RQ04912 1400 aa18.66■□□□□ 0.58
A1CF-202ENST00000373993 RCAN3Q9UKA8 241 aa18.65■□□□□ 0.58
A1CF-202ENST00000373993 L1TD1Q5T7N2 865 aaKnown RBP18.64■□□□□ 0.58
A1CF-202ENST00000373993 SOCS7O14512 581 aa18.64■□□□□ 0.57
A1CF-202ENST00000373993 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.57
A1CF-202ENST00000373993 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.57
A1CF-202ENST00000373993 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
A1CF-202ENST00000373993 AHDC1Q5TGY3 1603 aaPredicted RBP18.62■□□□□ 0.57
A1CF-202ENST00000373993 JCADQ9P266 1359 aa18.62■□□□□ 0.57
A1CF-202ENST00000373993 RALBP1Q15311 655 aa18.62■□□□□ 0.57
A1CF-202ENST00000373993 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
A1CF-202ENST00000373993 EXOC6Q8TAG9 804 aa18.61■□□□□ 0.57
A1CF-202ENST00000373993 RRP9O43818 475 aaKnown RBP18.6■□□□□ 0.57
A1CF-202ENST00000373993 WAPLQ7Z5K2 1190 aa18.59■□□□□ 0.57
A1CF-202ENST00000373993 TMC1Q8TDI8 760 aa18.59■□□□□ 0.57
A1CF-202ENST00000373993 RGS17Q9UGC6 210 aaPredicted RBP18.58■□□□□ 0.56
A1CF-202ENST00000373993 NHSL1Q5SYE7 1610 aa18.58■□□□□ 0.56
A1CF-202ENST00000373993 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
A1CF-202ENST00000373993 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
A1CF-202ENST00000373993 C1orf167Q5SNV9 1468 aa18.57■□□□□ 0.56
A1CF-202ENST00000373993 MYOM2P54296 1465 aa18.57■□□□□ 0.56
A1CF-202ENST00000373993 PRAG1Q86YV5 1406 aa18.56■□□□□ 0.56
A1CF-202ENST00000373993 KNDC1Q76NI1 1749 aa18.56■□□□□ 0.56
A1CF-202ENST00000373993 NUTM2FA1L443 756 aa18.56■□□□□ 0.56
A1CF-202ENST00000373993 PLEKHH1Q9ULM0 1364 aa18.56■□□□□ 0.56
A1CF-202ENST00000373993 MYBBP1AQ9BQG0 1328 aaKnown RBP18.56■□□□□ 0.56
A1CF-202ENST00000373993 SHPRHQ149N8 1683 aa18.56■□□□□ 0.56
A1CF-202ENST00000373993 ORAI2Q96SN7 254 aa18.55■□□□□ 0.56
A1CF-202ENST00000373993 YTHDC2Q9H6S0 1430 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 251.1 ms