RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 SPHKAPQ2M3C7 1700 aa11.59□□□□□ -0.55
SP140-202ENST00000373645 ITGAEP38570 1179 aa11.58□□□□□ -0.56
SP140-202ENST00000373645 QTRT2Q9H974 415 aaKnown RBP11.58□□□□□ -0.56
SP140-202ENST00000373645 NEXMIFQ5QGS0 1516 aa11.58□□□□□ -0.56
SP140-202ENST00000373645 CLTCL1P53675 1640 aa11.57□□□□□ -0.56
SP140-202ENST00000373645 ADAMTS2O95450 1211 aa11.57□□□□□ -0.56
SP140-202ENST00000373645 PCGF6Q9BYE7 350 aa11.57□□□□□ -0.56
SP140-202ENST00000373645 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
SP140-202ENST00000373645 ZNF326Q5BKZ1 582 aaKnown RBP11.56□□□□□ -0.56
SP140-202ENST00000373645 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
SP140-202ENST00000373645 RBM6P78332 1123 aaKnown RBP11.55□□□□□ -0.56
SP140-202ENST00000373645 ROBO2Q9HCK4 1378 aa11.54□□□□□ -0.56
SP140-202ENST00000373645 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
SP140-202ENST00000373645 LAMC1P11047 1609 aa11.53□□□□□ -0.56
SP140-202ENST00000373645 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
SP140-202ENST00000373645 SOS2Q07890 1332 aaPredicted RBP11.52□□□□□ -0.57
SP140-202ENST00000373645 PTCH1Q13635 1447 aa11.52□□□□□ -0.57
SP140-202ENST00000373645 EP400Q96L91 3159 aa11.5□□□□□ -0.57
SP140-202ENST00000373645 SLC4A2P04920 1241 aa11.5□□□□□ -0.57
SP140-202ENST00000373645 USP21Q9UK80 565 aa11.5□□□□□ -0.57
SP140-202ENST00000373645 ATAD2Q6PL18 1390 aa11.5□□□□□ -0.57
SP140-202ENST00000373645 ATRNO75882 1429 aa11.5□□□□□ -0.57
SP140-202ENST00000373645 MYOM2P54296 1465 aa11.5□□□□□ -0.57
SP140-202ENST00000373645 XPCQ01831 940 aaPredicted RBP11.49□□□□□ -0.57
SP140-202ENST00000373645 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
SP140-202ENST00000373645 COL22A1Q8NFW1 1626 aaPredicted RBP11.48□□□□□ -0.57
SP140-202ENST00000373645 KIF1BO60333 1816 aa11.47□□□□□ -0.57
SP140-202ENST00000373645 BCL9LQ86UU0 1499 aa11.47□□□□□ -0.57
SP140-202ENST00000373645 PXDNQ92626 1479 aa11.47□□□□□ -0.57
SP140-202ENST00000373645 PRAG1Q86YV5 1406 aa11.47□□□□□ -0.57
SP140-202ENST00000373645 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
SP140-202ENST00000373645 TRPC5Q9UL62 973 aaPredicted RBP11.46□□□□□ -0.57
SP140-202ENST00000373645 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
SP140-202ENST00000373645 NAIPQ13075 1403 aa11.44□□□□□ -0.58
SP140-202ENST00000373645 PPLO60437 1756 aa11.44□□□□□ -0.58
SP140-202ENST00000373645 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
SP140-202ENST00000373645 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
SP140-202ENST00000373645 GLI3P10071 1580 aa11.43□□□□□ -0.58
SP140-202ENST00000373645 NUTM2FA1L443 756 aa11.43□□□□□ -0.58
SP140-202ENST00000373645 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
SP140-202ENST00000373645 PLEKHH1Q9ULM0 1364 aa11.42□□□□□ -0.58
SP140-202ENST00000373645 FOXO3O43524 673 aa11.42□□□□□ -0.58
SP140-202ENST00000373645 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
SP140-202ENST00000373645 NPHP3Q7Z494 1330 aa11.41□□□□□ -0.58
SP140-202ENST00000373645 RALGAPBQ86X10 1494 aa11.41□□□□□ -0.58
SP140-202ENST00000373645 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
SP140-202ENST00000373645 ZRANB1Q9UGI0 708 aa11.41□□□□□ -0.58
SP140-202ENST00000373645 ADGRF5Q8IZF2 1346 aa11.4□□□□□ -0.58
SP140-202ENST00000373645 HRCP23327 699 aa11.4□□□□□ -0.58
SP140-202ENST00000373645 WAPLQ7Z5K2 1190 aa11.4□□□□□ -0.58
SP140-202ENST00000373645 GJD4Q96KN9 370 aaPredicted RBP11.4□□□□□ -0.58
SP140-202ENST00000373645 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.4□□□□□ -0.58
SP140-202ENST00000373645 SLIT2O94813 1529 aa11.4□□□□□ -0.59
SP140-202ENST00000373645 BRWD3Q6RI45 1802 aa11.39□□□□□ -0.59
SP140-202ENST00000373645 DEFB132Q7Z7B7 95 aa11.39□□□□□ -0.59
SP140-202ENST00000373645 STK26Q9P289 416 aa11.39□□□□□ -0.59
SP140-202ENST00000373645 TECPR2O15040 1411 aa11.38□□□□□ -0.59
SP140-202ENST00000373645 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
SP140-202ENST00000373645 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
SP140-202ENST00000373645 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
SP140-202ENST00000373645 FMN2Q9NZ56 1722 aa11.37□□□□□ -0.59
SP140-202ENST00000373645 RPGRIP1LQ68CZ1 1315 aa11.36□□□□□ -0.59
SP140-202ENST00000373645 BLMP54132 1417 aaPredicted RBP11.36□□□□□ -0.59
SP140-202ENST00000373645 TMEM132EQ6IEE7 984 aa11.36□□□□□ -0.59
SP140-202ENST00000373645 UNC5CLQ8IV45 518 aa11.36□□□□□ -0.59
SP140-202ENST00000373645 RAB3GAP2Q9H2M9 1393 aa11.36□□□□□ -0.59
SP140-202ENST00000373645 SPATA31A3Q5VYP0 1347 aa11.35□□□□□ -0.59
SP140-202ENST00000373645 CABLES1Q8TDN4 633 aa11.35□□□□□ -0.59
SP140-202ENST00000373645 SLC4A1APQ9BWU0 796 aaKnown RBP11.35□□□□□ -0.59
SP140-202ENST00000373645 LRPPRCP42704 1394 aaKnown RBP11.35□□□□□ -0.59
SP140-202ENST00000373645 KNDC1Q76NI1 1749 aa11.35□□□□□ -0.59
SP140-202ENST00000373645 ABCA3Q99758 1704 aa11.35□□□□□ -0.59
SP140-202ENST00000373645 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
SP140-202ENST00000373645 SPATA31E1Q6ZUB1 1445 aa11.35□□□□□ -0.59
SP140-202ENST00000373645 RGPD8O14715 1765 aaPredicted RBP11.34□□□□□ -0.59
SP140-202ENST00000373645 PLCH1Q4KWH8 1693 aa11.34□□□□□ -0.59
SP140-202ENST00000373645 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
SP140-202ENST00000373645 PIK3C2GO75747 1445 aa11.34□□□□□ -0.59
SP140-202ENST00000373645 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
SP140-202ENST00000373645 SEPT12Q8IYM1 358 aa11.33□□□□□ -0.6
SP140-202ENST00000373645 CCDC144AA2RUR9 1427 aa11.33□□□□□ -0.6
SP140-202ENST00000373645 TNS3Q68CZ2 1445 aa11.33□□□□□ -0.6
SP140-202ENST00000373645 KIF1AQ12756 1690 aa11.33□□□□□ -0.6
SP140-202ENST00000373645 ABCC11Q96J66 1382 aa11.32□□□□□ -0.6
SP140-202ENST00000373645 YTHDC2Q9H6S0 1430 aaKnown RBP11.32□□□□□ -0.6
SP140-202ENST00000373645 KRT28Q7Z3Y7 464 aa11.31□□□□□ -0.6
SP140-202ENST00000373645 LRP5O75197 1615 aa11.31□□□□□ -0.6
SP140-202ENST00000373645 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
SP140-202ENST00000373645 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
SP140-202ENST00000373645 VPS72Q15906 364 aa11.29□□□□□ -0.6
SP140-202ENST00000373645 CCDC9Q9Y3X0 531 aaKnown RBP11.29□□□□□ -0.6
SP140-202ENST00000373645 NRAPQ86VF7 1730 aa11.29□□□□□ -0.6
SP140-202ENST00000373645 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
SP140-202ENST00000373645 ANKRD30BQ9BXX2 1392 aa11.28□□□□□ -0.6
SP140-202ENST00000373645 NRXN1Q9ULB1 1477 aa11.28□□□□□ -0.6
SP140-202ENST00000373645 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
SP140-202ENST00000373645 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
SP140-202ENST00000373645 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
SP140-202ENST00000373645 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
SP140-202ENST00000373645 POLA2Q14181 598 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms