RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 XRCC6P12956 609 aaKnown RBP eCLIP15.12■□□□□ 0.01
NCDN-202ENST00000373243 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
NCDN-202ENST00000373243 NUTM2FA1L443 756 aa15.12■□□□□ 0.01
NCDN-202ENST00000373243 KIAA1211Q6ZU35 1233 aa15.12■□□□□ 0.01
NCDN-202ENST00000373243 HMOX1P09601 288 aa15.12■□□□□ 0.01
NCDN-202ENST00000373243 FOXD4L5Q5VV16 416 aaPredicted RBP15.12■□□□□ 0.01
NCDN-202ENST00000373243 FOXD4L4Q8WXT5 416 aaPredicted RBP15.12■□□□□ 0.01
NCDN-202ENST00000373243 C1orf115Q9H7X2 142 aa15.12■□□□□ 0.01
NCDN-202ENST00000373243 ESPNB1AK53 854 aa15.11■□□□□ 0.01
NCDN-202ENST00000373243 RARSP54136 660 aaKnown RBP15.11■□□□□ 0.01
NCDN-202ENST00000373243 PCDHB15Q9Y5E8 787 aa15.11■□□□□ 0.01
NCDN-202ENST00000373243 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
NCDN-202ENST00000373243 PRDM4Q9UKN5 801 aa15.1■□□□□ 0.01
NCDN-202ENST00000373243 SCAPERQ9BY12 1400 aa15.1■□□□□ 0.01
NCDN-202ENST00000373243 TPM2P07951 284 aa15.1■□□□□ 0.01
NCDN-202ENST00000373243 HDGFL2Q7Z4V5 671 aaPredicted RBP15.09■□□□□ 0.01
NCDN-202ENST00000373243 BCORL1Q5H9F3 1711 aa15.09■□□□□ 0.01
NCDN-202ENST00000373243 RLBP1P12271 317 aa15.08■□□□□ 0.01
NCDN-202ENST00000373243 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0.01
NCDN-202ENST00000373243 UHRF1BP1Q6BDS2 1440 aa15.08■□□□□ 0
NCDN-202ENST00000373243 EVC2Q86UK5 1308 aa15.08■□□□□ 0
NCDN-202ENST00000373243 NOL8Q76FK4 1167 aaKnown RBP15.08■□□□□ 0
NCDN-202ENST00000373243 CARD14Q9BXL6 1004 aa15.08■□□□□ 0
NCDN-202ENST00000373243 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
NCDN-202ENST00000373243 NOB1Q9ULX3 412 aaKnown RBP15.07■□□□□ 0
NCDN-202ENST00000373243 DDX19BQ9UMR2 479 aa15.07■□□□□ 0
NCDN-202ENST00000373243 TERF2IPQ9NYB0 399 aa15.07■□□□□ 0
NCDN-202ENST00000373243 NKTRP30414 1462 aaKnown RBP15.07■□□□□ 0
NCDN-202ENST00000373243 FAM135AQ9P2D6 1515 aa15.07■□□□□ 0
NCDN-202ENST00000373243 GBP4Q96PP9 640 aa15.06■□□□□ 0
NCDN-202ENST00000373243 TBC1D2Q9BYX2 928 aa15.06■□□□□ 0
NCDN-202ENST00000373243 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
NCDN-202ENST00000373243 CHD1O14646 1710 aa15.06■□□□□ 0
NCDN-202ENST00000373243 TRAK2O60296 914 aa15.06■□□□□ 0
NCDN-202ENST00000373243 NSD3Q9BZ95 1437 aa15.06■□□□□ 0
NCDN-202ENST00000373243 VGLL3A8MV65 326 aa15.05■□□□□ 0
NCDN-202ENST00000373243 FOXD4L6Q3SYB3 417 aaPredicted RBP15.05■□□□□ -0
NCDN-202ENST00000373243 TAF7LQ5H9L4 462 aa15.05■□□□□ -0
NCDN-202ENST00000373243 FOXD4L3Q6VB84 417 aaPredicted RBP15.05■□□□□ -0
NCDN-202ENST00000373243 THUMPD2Q9BTF0 503 aaKnown RBP15.05■□□□□ -0
NCDN-202ENST00000373243 DIAPH1O60610 1272 aaKnown RBP15.04■□□□□ -0
NCDN-202ENST00000373243 MVPQ14764 893 aaKnown RBP15.04■□□□□ -0
NCDN-202ENST00000373243 NGEFQ8N5V2 710 aa15.04■□□□□ -0
NCDN-202ENST00000373243 A2MP01023 1474 aa15.04■□□□□ -0
NCDN-202ENST00000373243 FBLN1P23142 703 aa15.04■□□□□ -0
NCDN-202ENST00000373243 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
NCDN-202ENST00000373243 C14orf37Q86TY3 774 aa15.04■□□□□ -0
NCDN-202ENST00000373243 CDK11BP21127 795 aaKnown RBP15.03■□□□□ -0
NCDN-202ENST00000373243 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
NCDN-202ENST00000373243 PLCB2Q00722 1185 aa15.03■□□□□ -0
NCDN-202ENST00000373243 SSH1Q8WYL5 1049 aa15.03■□□□□ -0
NCDN-202ENST00000373243 KDM5CP41229 1560 aa15.03■□□□□ -0
NCDN-202ENST00000373243 FAM69CQ0P6D2 419 aa15.02■□□□□ -0
NCDN-202ENST00000373243 VGFO15240 615 aaPredicted RBP15.02□□□□□ -0.01
NCDN-202ENST00000373243 TRAPPC8Q9Y2L5 1435 aa15.02□□□□□ -0.01
NCDN-202ENST00000373243 PTMAP06454 111 aaKnown RBP15.02□□□□□ -0.01
NCDN-202ENST00000373243 TMEM57Q8N5G2 664 aa15.02□□□□□ -0.01
NCDN-202ENST00000373243 DDX49Q9Y6V7 483 aaKnown RBP15.02□□□□□ -0.01
NCDN-202ENST00000373243 MCM4P33991 863 aa15.01□□□□□ -0.01
NCDN-202ENST00000373243 CASC1Q6TDU7 716 aa15.01□□□□□ -0.01
NCDN-202ENST00000373243 R3HCC1Q9Y3T6 440 aaKnown RBP15.01□□□□□ -0.01
NCDN-202ENST00000373243 COL17A1Q9UMD9 1497 aaPredicted RBP15□□□□□ -0.01
NCDN-202ENST00000373243 ABCA8O94911 1581 aa15□□□□□ -0.01
NCDN-202ENST00000373243 PRKAR2BP31323 418 aa15□□□□□ -0.01
NCDN-202ENST00000373243 ATF7IPQ6VMQ6 1270 aa15□□□□□ -0.01
NCDN-202ENST00000373243 STAC3Q96MF2 364 aa15□□□□□ -0.01
NCDN-202ENST00000373243 MSNP26038 577 aaKnown RBP14.99□□□□□ -0.01
NCDN-202ENST00000373243 WDR63Q8IWG1 891 aa14.99□□□□□ -0.01
NCDN-202ENST00000373243 ARHGEF12Q9NZN5 1544 aa14.99□□□□□ -0.01
NCDN-202ENST00000373243 ADGRL2O95490 1459 aa14.99□□□□□ -0.01
NCDN-202ENST00000373243 DDX11L8A8MPP1 907 aa14.98□□□□□ -0.01
NCDN-202ENST00000373243 TRIM27P14373 513 aa14.98□□□□□ -0.01
NCDN-202ENST00000373243 GTF2E1P29083 439 aaPredicted RBP14.98□□□□□ -0.01
NCDN-202ENST00000373243 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
NCDN-202ENST00000373243 ABCC10Q5T3U5 1492 aa14.97□□□□□ -0.01
NCDN-202ENST00000373243 SCAF11Q99590 1463 aaKnown RBP14.97□□□□□ -0.01
NCDN-202ENST00000373243 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
NCDN-202ENST00000373243 DNTTIP2Q5QJE6 756 aaKnown RBP14.97□□□□□ -0.01
NCDN-202ENST00000373243 ITSN2Q9NZM3 1697 aa14.97□□□□□ -0.01
NCDN-202ENST00000373243 PRAM1Q96QH2 718 aa14.97□□□□□ -0.01
NCDN-202ENST00000373243 MRE11P49959 708 aa14.96□□□□□ -0.01
NCDN-202ENST00000373243 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
NCDN-202ENST00000373243 TBC1D32Q96NH3 1257 aa14.96□□□□□ -0.02
NCDN-202ENST00000373243 NECTIN2Q92692 538 aa14.95□□□□□ -0.02
NCDN-202ENST00000373243 MAGI2Q86UL8 1455 aa14.95□□□□□ -0.02
NCDN-202ENST00000373243 CABP1Q9NZU7 370 aa14.95□□□□□ -0.02
NCDN-202ENST00000373243 BLMP54132 1417 aaPredicted RBP14.94□□□□□ -0.02
NCDN-202ENST00000373243 GRPEL1Q9HAV7 217 aa14.94□□□□□ -0.02
NCDN-202ENST00000373243 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
NCDN-202ENST00000373243 ABCC2Q92887 1545 aa14.94□□□□□ -0.02
NCDN-202ENST00000373243 ASXL2Q76L83 1435 aa14.93□□□□□ -0.02
NCDN-202ENST00000373243 ASXL1Q8IXJ9 1541 aa14.93□□□□□ -0.02
NCDN-202ENST00000373243 PLCH2O75038 1416 aa14.93□□□□□ -0.02
NCDN-202ENST00000373243 GPRASP1Q5JY77 1395 aa14.93□□□□□ -0.02
NCDN-202ENST00000373243 TRIM6-TRIM34B2RNG4 842 aa14.93□□□□□ -0.02
NCDN-202ENST00000373243 MCTP1Q6DN14 999 aa14.92□□□□□ -0.02
NCDN-202ENST00000373243 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
NCDN-202ENST00000373243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.92□□□□□ -0.02
NCDN-202ENST00000373243 MAP7D2Q96T17 732 aa14.91□□□□□ -0.02
NCDN-202ENST00000373243 DCTN1Q14203 1278 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms