RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 SHPRHQ149N8 1683 aa21.99■■□□□ 1.11
C9orf16-201ENST00000372994 LRRC59Q96AG4 307 aaKnown RBP21.99■■□□□ 1.11
C9orf16-201ENST00000372994 ORAI2Q96SN7 254 aa21.98■■□□□ 1.11
C9orf16-201ENST00000372994 CDC42BPGQ6DT37 1551 aa21.98■■□□□ 1.11
C9orf16-201ENST00000372994 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
C9orf16-201ENST00000372994 DCAF11Q8TEB1 546 aa21.97■■□□□ 1.11
C9orf16-201ENST00000372994 DDX17Q92841 729 aaKnown RBP21.97■■□□□ 1.11
C9orf16-201ENST00000372994 PLEKHH1Q9ULM0 1364 aa21.97■■□□□ 1.11
C9orf16-201ENST00000372994 KDM2AQ9Y2K7 1162 aa21.94■■□□□ 1.1
C9orf16-201ENST00000372994 LRP6O75581 1613 aa21.94■■□□□ 1.1
C9orf16-201ENST00000372994 POTEAQ6S8J7 498 aa21.93■■□□□ 1.1
C9orf16-201ENST00000372994 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
C9orf16-201ENST00000372994 ADGRB1O14514 1584 aa21.91■■□□□ 1.1
C9orf16-201ENST00000372994 ESCO1Q5FWF5 840 aa21.9■■□□□ 1.1
C9orf16-201ENST00000372994 PNPLA6Q8IY17 1366 aa21.89■■□□□ 1.1
C9orf16-201ENST00000372994 DLC1Q96QB1 1528 aa21.89■■□□□ 1.09
C9orf16-201ENST00000372994 MEX3CQ5U5Q3 659 aaKnown RBP21.88■■□□□ 1.09
C9orf16-201ENST00000372994 PRAM1Q96QH2 718 aa21.88■■□□□ 1.09
C9orf16-201ENST00000372994 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
C9orf16-201ENST00000372994 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
C9orf16-201ENST00000372994 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
C9orf16-201ENST00000372994 FMN2Q9NZ56 1722 aa21.86■■□□□ 1.09
C9orf16-201ENST00000372994 NPHP3Q7Z494 1330 aa21.86■■□□□ 1.09
C9orf16-201ENST00000372994 NUTM2FA1L443 756 aa21.86■■□□□ 1.09
C9orf16-201ENST00000372994 FOXO3O43524 673 aa21.84■■□□□ 1.09
C9orf16-201ENST00000372994 POGKQ9P215 609 aa21.84■■□□□ 1.09
C9orf16-201ENST00000372994 TRAK1Q9UPV9 953 aa21.84■■□□□ 1.09
C9orf16-201ENST00000372994 SAFB2Q14151 953 aaKnown RBP eCLIP21.83■■□□□ 1.09
C9orf16-201ENST00000372994 ZNF772Q68DY9 489 aaPredicted RBP21.83■■□□□ 1.09
C9orf16-201ENST00000372994 PXDNQ92626 1479 aa21.82■■□□□ 1.08
C9orf16-201ENST00000372994 RGPD8O14715 1765 aaPredicted RBP21.79■■□□□ 1.08
C9orf16-201ENST00000372994 KIF1AQ12756 1690 aa21.77■■□□□ 1.08
C9orf16-201ENST00000372994 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.08
C9orf16-201ENST00000372994 ADGRB2O60241 1585 aa21.77■■□□□ 1.08
C9orf16-201ENST00000372994 AFF2P51816 1311 aa21.77■■□□□ 1.07
C9orf16-201ENST00000372994 COL22A1Q8NFW1 1626 aaPredicted RBP21.77■■□□□ 1.07
C9orf16-201ENST00000372994 PHF8Q9UPP1 1060 aa21.76■■□□□ 1.07
C9orf16-201ENST00000372994 KIAA1210Q9ULL0 1709 aa21.75■■□□□ 1.07
C9orf16-201ENST00000372994 C8orf37Q96NL8 207 aa21.75■■□□□ 1.07
C9orf16-201ENST00000372994 ANKARQ7Z5J8 1434 aa21.74■■□□□ 1.07
C9orf16-201ENST00000372994 MINK1Q8N4C8 1332 aaPredicted RBP21.74■■□□□ 1.07
C9orf16-201ENST00000372994 ADAMTS2O95450 1211 aa21.73■■□□□ 1.07
C9orf16-201ENST00000372994 KRT28Q7Z3Y7 464 aa21.73■■□□□ 1.07
C9orf16-201ENST00000372994 HIRIP3Q9BW71 556 aaPredicted RBP21.73■■□□□ 1.07
C9orf16-201ENST00000372994 SPATA31A3Q5VYP0 1347 aa21.73■■□□□ 1.07
C9orf16-201ENST00000372994 USP32Q8NFA0 1604 aa21.72■■□□□ 1.07
C9orf16-201ENST00000372994 ARHGEF28Q8N1W1 1705 aaKnown RBP21.72■■□□□ 1.07
C9orf16-201ENST00000372994 WASLO00401 505 aaPredicted RBP21.71■■□□□ 1.07
C9orf16-201ENST00000372994 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
C9orf16-201ENST00000372994 NGLY1Q96IV0 654 aa21.71■■□□□ 1.07
C9orf16-201ENST00000372994 RXRBP28702 533 aa21.7■■□□□ 1.06
C9orf16-201ENST00000372994 PSME1Q06323 249 aa21.7■■□□□ 1.06
C9orf16-201ENST00000372994 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
C9orf16-201ENST00000372994 SIN3AQ96ST3 1273 aa21.7■■□□□ 1.06
C9orf16-201ENST00000372994 EIF3AQ14152 1382 aaKnown RBP21.7■■□□□ 1.06
C9orf16-201ENST00000372994 FNBP4Q8N3X1 1017 aaPredicted RBP21.68■■□□□ 1.06
C9orf16-201ENST00000372994 QTRT2Q9H974 415 aaKnown RBP21.68■■□□□ 1.06
C9orf16-201ENST00000372994 TULP4Q9NRJ4 1543 aa21.67■■□□□ 1.06
C9orf16-201ENST00000372994 PRR36Q9H6K5 1346 aa21.67■■□□□ 1.06
C9orf16-201ENST00000372994 PMFBP1Q8TBY8 1022 aa21.67■■□□□ 1.06
C9orf16-201ENST00000372994 SBNO1A3KN83 1393 aa21.66■■□□□ 1.06
C9orf16-201ENST00000372994 CDK12Q9NYV4 1490 aaPredicted RBP21.64■■□□□ 1.06
C9orf16-201ENST00000372994 TNS3Q68CZ2 1445 aa21.64■■□□□ 1.06
C9orf16-201ENST00000372994 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
C9orf16-201ENST00000372994 NEUROD1Q13562 356 aa21.64■■□□□ 1.05
C9orf16-201ENST00000372994 RBM6P78332 1123 aaKnown RBP21.63■■□□□ 1.05
C9orf16-201ENST00000372994 USP21Q9UK80 565 aa21.63■■□□□ 1.05
C9orf16-201ENST00000372994 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
C9orf16-201ENST00000372994 NUDT16Q96DE0 195 aaKnown RBP21.61■■□□□ 1.05
C9orf16-201ENST00000372994 CDK19Q9BWU1 502 aa21.61■■□□□ 1.05
C9orf16-201ENST00000372994 ARHGEF10O15013 1369 aa21.61■■□□□ 1.05
C9orf16-201ENST00000372994 TRPC5Q9UL62 973 aaPredicted RBP21.6■■□□□ 1.05
C9orf16-201ENST00000372994 GPRASP1Q5JY77 1395 aa21.6■■□□□ 1.05
C9orf16-201ENST00000372994 ATP7BP35670 1465 aa21.58■■□□□ 1.05
C9orf16-201ENST00000372994 BCL9LQ86UU0 1499 aa21.58■■□□□ 1.05
C9orf16-201ENST00000372994 TRPM3Q9HCF6 1732 aaPredicted RBP21.58■■□□□ 1.04
C9orf16-201ENST00000372994 CENPJQ9HC77 1338 aaPredicted RBP21.57■■□□□ 1.04
C9orf16-201ENST00000372994 LMOD2Q6P5Q4 547 aa21.57■■□□□ 1.04
C9orf16-201ENST00000372994 NGDNQ8NEJ9 315 aaKnown RBP21.57■■□□□ 1.04
C9orf16-201ENST00000372994 ITSN1Q15811 1721 aa21.56■■□□□ 1.04
C9orf16-201ENST00000372994 CABLES1Q8TDN4 633 aa21.56■■□□□ 1.04
C9orf16-201ENST00000372994 CCDC61Q9Y6R9 512 aa21.56■■□□□ 1.04
C9orf16-201ENST00000372994 ATRNO75882 1429 aa21.55■■□□□ 1.04
C9orf16-201ENST00000372994 TRPM1Q7Z4N2 1603 aa21.55■■□□□ 1.04
C9orf16-201ENST00000372994 ALS2Q96Q42 1657 aa21.53■■□□□ 1.04
C9orf16-201ENST00000372994 PLEKHG3A1L390 1219 aa21.53■■□□□ 1.04
C9orf16-201ENST00000372994 HAP1P54257 671 aaPredicted RBP21.53■■□□□ 1.04
C9orf16-201ENST00000372994 SLIT2O94813 1529 aa21.53■■□□□ 1.04
C9orf16-201ENST00000372994 RGS12O14924 1447 aa21.53■■□□□ 1.04
C9orf16-201ENST00000372994 POLR3AO14802 1390 aaPredicted RBP21.51■■□□□ 1.03
C9orf16-201ENST00000372994 NBPF8Q3BBV2 869 aa21.51■■□□□ 1.03
C9orf16-201ENST00000372994 UNC5CLQ8IV45 518 aa21.51■■□□□ 1.03
C9orf16-201ENST00000372994 ABCA3Q99758 1704 aa21.51■■□□□ 1.03
C9orf16-201ENST00000372994 TOPAZ1Q8N9V7 1692 aa21.5■■□□□ 1.03
C9orf16-201ENST00000372994 ROCK2O75116 1388 aaKnown RBP21.5■■□□□ 1.03
C9orf16-201ENST00000372994 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.5■■□□□ 1.03
C9orf16-201ENST00000372994 UPF1Q92900 1129 aaKnown RBP eCLIP21.5■■□□□ 1.03
C9orf16-201ENST00000372994 QRICH2Q9H0J4 1663 aa21.5■■□□□ 1.03
C9orf16-201ENST00000372994 PAK3O75914 559 aaPredicted RBP21.49■■□□□ 1.03
C9orf16-201ENST00000372994 PLEKHG5O94827 1062 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms