RNA–Protein interactions for RNA: ENST00000371021.4

FRAT1-201, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

APPRIS P1 BASIC

Gene FRAT1, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-201ENST00000371021 CABP2Q9NPB3 220 aa28.44■■■□□ 2.14
FRAT1-201ENST00000371021 KDM2BQ8NHM5 1336 aa28.44■■■□□ 2.14
FRAT1-201ENST00000371021 SIGLEC1Q9BZZ2 1709 aa28.44■■■□□ 2.14
FRAT1-201ENST00000371021 QRICH2Q9H0J4 1663 aa28.43■■■□□ 2.14
FRAT1-201ENST00000371021 WWC1Q8IX03 1113 aa28.43■■■□□ 2.14
FRAT1-201ENST00000371021 NKTRP30414 1462 aaKnown RBP28.42■■■□□ 2.14
FRAT1-201ENST00000371021 MTHFSP49914 203 aa28.42■■■□□ 2.14
FRAT1-201ENST00000371021 NEO1Q92859 1461 aa28.42■■■□□ 2.14
FRAT1-201ENST00000371021 YEATS2Q9ULM3 1422 aa28.41■■■□□ 2.14
FRAT1-201ENST00000371021 CAMSAP1Q5T5Y3 1602 aa28.41■■■□□ 2.14
FRAT1-201ENST00000371021 EVC2Q86UK5 1308 aa28.4■■■□□ 2.14
FRAT1-201ENST00000371021 CGNL1Q0VF96 1302 aa28.38■■■□□ 2.13
FRAT1-201ENST00000371021 DIP2CQ9Y2E4 1556 aa28.38■■■□□ 2.13
FRAT1-201ENST00000371021 CENPQQ7L2Z9 268 aaPredicted RBP28.38■■■□□ 2.13
FRAT1-201ENST00000371021 TCP11L2Q8N4U5 519 aa28.36■■■□□ 2.13
FRAT1-201ENST00000371021 ZC3H13Q5T200 1668 aaKnown RBP28.35■■■□□ 2.13
FRAT1-201ENST00000371021 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
FRAT1-201ENST00000371021 GLI2P10070 1586 aa28.35■■■□□ 2.13
FRAT1-201ENST00000371021 NEXMIFQ5QGS0 1516 aa28.35■■■□□ 2.13
FRAT1-201ENST00000371021 CYB5RLQ6IPT4 315 aa28.35■■■□□ 2.13
FRAT1-201ENST00000371021 FBXO31Q5XUX0 539 aaPredicted RBP28.33■■■□□ 2.13
FRAT1-201ENST00000371021 NGEFQ8N5V2 710 aa28.33■■■□□ 2.13
FRAT1-201ENST00000371021 TULP4Q9NRJ4 1543 aa28.32■■■□□ 2.12
FRAT1-201ENST00000371021 SRPK2P78362 688 aaKnown RBP28.31■■■□□ 2.12
FRAT1-201ENST00000371021 SLC52A1Q9NWF4 448 aa28.31■■■□□ 2.12
FRAT1-201ENST00000371021 PIK3C2BO00750 1634 aa28.3■■■□□ 2.12
FRAT1-201ENST00000371021 ANKRD36BQ8N2N9 1353 aa28.29■■■□□ 2.12
FRAT1-201ENST00000371021 CFAP53Q96M91 514 aa28.29■■■□□ 2.12
FRAT1-201ENST00000371021 RGS3P49796 1198 aa28.28■■■□□ 2.12
FRAT1-201ENST00000371021 ARHGAP31Q2M1Z3 1444 aa28.28■■■□□ 2.12
FRAT1-201ENST00000371021 MINK1Q8N4C8 1332 aaPredicted RBP28.28■■■□□ 2.12
FRAT1-201ENST00000371021 PANK1Q8TE04 598 aa28.28■■■□□ 2.12
FRAT1-201ENST00000371021 SHPRHQ149N8 1683 aa28.27■■■□□ 2.12
FRAT1-201ENST00000371021 CANXP27824 592 aaKnown RBP28.27■■■□□ 2.12
FRAT1-201ENST00000371021 FRAT1Q92837 279 aaPredicted RBP28.27■■■□□ 2.12
FRAT1-201ENST00000371021 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.12
FRAT1-201ENST00000371021 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.12
FRAT1-201ENST00000371021 PUS7Q96PZ0 661 aaKnown RBP28.26■■■□□ 2.11
FRAT1-201ENST00000371021 GGNBP2Q9H3C7 697 aa28.25■■■□□ 2.11
FRAT1-201ENST00000371021 COG6Q9Y2V7 657 aa28.25■■■□□ 2.11
FRAT1-201ENST00000371021 PRAM1Q96QH2 718 aa28.24■■■□□ 2.11
FRAT1-201ENST00000371021 ARHGEF28Q8N1W1 1705 aaKnown RBP28.24■■■□□ 2.11
FRAT1-201ENST00000371021 IGHDP01880 384 aa28.24■■■□□ 2.11
FRAT1-201ENST00000371021 RICTORQ6R327 1708 aa28.24■■■□□ 2.11
FRAT1-201ENST00000371021 BCL2L13Q9BXK5 485 aa28.22■■■□□ 2.11
FRAT1-201ENST00000371021 POGKQ9P215 609 aa28.22■■■□□ 2.11
FRAT1-201ENST00000371021 A0A1W2PP64 1363 aa28.22■■■□□ 2.11
FRAT1-201ENST00000371021 PHF23Q9BUL5 403 aaPredicted RBP28.21■■■□□ 2.11
FRAT1-201ENST00000371021 DEKP35659 375 aaKnown RBP28.21■■■□□ 2.11
FRAT1-201ENST00000371021 RARSP54136 660 aaKnown RBP28.2■■■□□ 2.1
FRAT1-201ENST00000371021 FAM69CQ0P6D2 419 aa28.2■■■□□ 2.1
FRAT1-201ENST00000371021 TNNQ9UQP3 1299 aa28.2■■■□□ 2.1
FRAT1-201ENST00000371021 PDE3AQ14432 1141 aa28.2■■■□□ 2.1
FRAT1-201ENST00000371021 LAS1LQ9Y4W2 734 aaKnown RBP28.19■■■□□ 2.1
FRAT1-201ENST00000371021 STAG3Q9UJ98 1225 aa28.18■■■□□ 2.1
FRAT1-201ENST00000371021 IQSEC2Q5JU85 1478 aa28.18■■■□□ 2.1
FRAT1-201ENST00000371021 WDR63Q8IWG1 891 aa28.18■■■□□ 2.1
FRAT1-201ENST00000371021 ZFYVE9O95405 1425 aa28.17■■■□□ 2.1
FRAT1-201ENST00000371021 U2SURPO15042 1029 aaKnown RBP28.17■■■□□ 2.1
FRAT1-201ENST00000371021 C8orf34Q49A92 452 aa28.17■■■□□ 2.1
FRAT1-201ENST00000371021 FAM161AQ3B820 660 aa28.16■■■□□ 2.1
FRAT1-201ENST00000371021 USP32Q8NFA0 1604 aa28.16■■■□□ 2.1
FRAT1-201ENST00000371021 MYO5BQ9ULV0 1848 aa28.15■■■□□ 2.1
FRAT1-201ENST00000371021 NSD2O96028 1365 aa28.15■■■□□ 2.1
FRAT1-201ENST00000371021 FYB1O15117 783 aa28.14■■■□□ 2.1
FRAT1-201ENST00000371021 CLUAP1Q96AJ1 413 aa28.14■■■□□ 2.1
FRAT1-201ENST00000371021 RLBP1P12271 317 aa28.13■■■□□ 2.09
FRAT1-201ENST00000371021 ABCC11Q96J66 1382 aa28.13■■■□□ 2.09
FRAT1-201ENST00000371021 YTHDC2Q9H6S0 1430 aaKnown RBP28.12■■■□□ 2.09
FRAT1-201ENST00000371021 PTPRMP28827 1452 aa28.12■■■□□ 2.09
FRAT1-201ENST00000371021 TMEM131LA2VDJ0 1609 aa28.12■■■□□ 2.09
FRAT1-201ENST00000371021 CCDC27Q2M243 656 aa28.12■■■□□ 2.09
FRAT1-201ENST00000371021 SLC4A3P48751 1232 aa28.11■■■□□ 2.09
FRAT1-201ENST00000371021 CDK19Q9BWU1 502 aa28.11■■■□□ 2.09
FRAT1-201ENST00000371021 PREX1Q8TCU6 1659 aa28.11■■■□□ 2.09
FRAT1-201ENST00000371021 TERF2IPQ9NYB0 399 aa28.1■■■□□ 2.09
FRAT1-201ENST00000371021 MLECQ14165 292 aa28.1■■■□□ 2.09
FRAT1-201ENST00000371021 CABP1Q9NZU7 370 aa28.09■■■□□ 2.09
FRAT1-201ENST00000371021 TSR2Q969E8 191 aaKnown RBP28.09■■■□□ 2.09
FRAT1-201ENST00000371021 RTL5Q5HYW3 569 aaPredicted RBP28.08■■■□□ 2.09
FRAT1-201ENST00000371021 WAPLQ7Z5K2 1190 aa28.07■■■□□ 2.08
FRAT1-201ENST00000371021 MYH16Q9H6N6 1097 aa28.06■■■□□ 2.08
FRAT1-201ENST00000371021 ATAD2Q6PL18 1390 aa28.06■■■□□ 2.08
FRAT1-201ENST00000371021 FBLN1P23142 703 aa28.06■■■□□ 2.08
FRAT1-201ENST00000371021 PLEKHF1Q96S99 279 aa28.06■■■□□ 2.08
FRAT1-201ENST00000371021 DDRGK1Q96HY6 314 aa28.05■■■□□ 2.08
FRAT1-201ENST00000371021 NINLQ9Y2I6 1382 aa28.05■■■□□ 2.08
FRAT1-201ENST00000371021 CD163L1Q9NR16 1453 aa28.04■■■□□ 2.08
FRAT1-201ENST00000371021 PCDHB15Q9Y5E8 787 aa28.04■■■□□ 2.08
FRAT1-201ENST00000371021 TMPOP42166 694 aaKnown RBP28.03■■■□□ 2.08
FRAT1-201ENST00000371021 HDGFL2Q7Z4V5 671 aaPredicted RBP28.03■■■□□ 2.08
FRAT1-201ENST00000371021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.03■■■□□ 2.08
FRAT1-201ENST00000371021 TRIM35Q9UPQ4 493 aa28.01■■■□□ 2.07
FRAT1-201ENST00000371021 ALKQ9UM73 1620 aa28.01■■■□□ 2.07
FRAT1-201ENST00000371021 NEFMP07197 916 aa28■■■□□ 2.07
FRAT1-201ENST00000371021 EXOSC9Q06265 439 aaKnown RBP27.99■■■□□ 2.07
FRAT1-201ENST00000371021 MAPK8IP3Q9UPT6 1336 aa27.99■■■□□ 2.07
FRAT1-201ENST00000371021 PPM1GO15355 546 aaPredicted RBP27.99■■■□□ 2.07
FRAT1-201ENST00000371021 DIAPH1O60610 1272 aaKnown RBP27.97■■■□□ 2.07
FRAT1-201ENST00000371021 NLRP1Q9C000 1473 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms