RNA–Protein interactions for RNA: ENST00000370888.5

LRRC1-202, Transcript of leucine rich repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-202ENST00000370888 MROH2AA6NES4 1674 aa25.05■■□□□ 1.6
LRRC1-202ENST00000370888 ARAP3Q8WWN8 1544 aa25.05■■□□□ 1.6
LRRC1-202ENST00000370888 GSE1Q14687 1217 aa25.05■■□□□ 1.6
LRRC1-202ENST00000370888 U2AF1L5P0DN76 240 aaPredicted RBP25.04■■□□□ 1.6
LRRC1-202ENST00000370888 U2AF1Q01081 240 aaKnown RBP eCLIP25.04■■□□□ 1.6
LRRC1-202ENST00000370888 KIAA1210Q9ULL0 1709 aa25.04■■□□□ 1.6
LRRC1-202ENST00000370888 EFCAB6Q5THR3 1501 aa25.03■■□□□ 1.6
LRRC1-202ENST00000370888 KIF1BO60333 1816 aa25.03■■□□□ 1.6
LRRC1-202ENST00000370888 C14orf93Q9H972 538 aaKnown RBP25.03■■□□□ 1.6
LRRC1-202ENST00000370888 ASXL2Q76L83 1435 aa25.03■■□□□ 1.6
LRRC1-202ENST00000370888 CABP2Q9NPB3 220 aa25.02■■□□□ 1.6
LRRC1-202ENST00000370888 PCDHB15Q9Y5E8 787 aa25.02■■□□□ 1.6
LRRC1-202ENST00000370888 ABCA9Q8IUA7 1624 aa25.02■■□□□ 1.6
LRRC1-202ENST00000370888 PPRC1Q5VV67 1664 aaKnown RBP25.02■■□□□ 1.6
LRRC1-202ENST00000370888 BRPF3Q9ULD4 1205 aa25.01■■□□□ 1.59
LRRC1-202ENST00000370888 NGEFQ8N5V2 710 aa25■■□□□ 1.59
LRRC1-202ENST00000370888 STK26Q9P289 416 aa25■■□□□ 1.59
LRRC1-202ENST00000370888 CFAP53Q96M91 514 aa24.99■■□□□ 1.59
LRRC1-202ENST00000370888 NPATQ14207 1427 aa24.98■■□□□ 1.59
LRRC1-202ENST00000370888 USP19O94966 1318 aa24.98■■□□□ 1.59
LRRC1-202ENST00000370888 SBNO2Q9Y2G9 1366 aa24.97■■□□□ 1.59
LRRC1-202ENST00000370888 TSR2Q969E8 191 aaKnown RBP24.97■■□□□ 1.59
LRRC1-202ENST00000370888 SLKQ9H2G2 1235 aaPredicted RBP24.97■■□□□ 1.59
LRRC1-202ENST00000370888 U2SURPO15042 1029 aaKnown RBP24.96■■□□□ 1.59
LRRC1-202ENST00000370888 MAPK8IP3Q9UPT6 1336 aa24.95■■□□□ 1.58
LRRC1-202ENST00000370888 NRXN1Q9ULB1 1477 aa24.95■■□□□ 1.58
LRRC1-202ENST00000370888 KIDINS220Q9ULH0 1771 aa24.94■■□□□ 1.58
LRRC1-202ENST00000370888 NPM1P06748 294 aaKnown RBP eCLIP24.93■■□□□ 1.58
LRRC1-202ENST00000370888 PDZRN3Q9UPQ7 1066 aa24.93■■□□□ 1.58
LRRC1-202ENST00000370888 WDR63Q8IWG1 891 aa24.92■■□□□ 1.58
LRRC1-202ENST00000370888 GGNBP2Q9H3C7 697 aa24.92■■□□□ 1.58
LRRC1-202ENST00000370888 ADGRB3O60242 1522 aa24.92■■□□□ 1.58
LRRC1-202ENST00000370888 RAPGEF3O95398 923 aa24.91■■□□□ 1.58
LRRC1-202ENST00000370888 EVC2Q86UK5 1308 aa24.91■■□□□ 1.58
LRRC1-202ENST00000370888 PMFBP1Q8TBY8 1022 aa24.91■■□□□ 1.58
LRRC1-202ENST00000370888 SRPK2P78362 688 aaKnown RBP24.91■■□□□ 1.58
LRRC1-202ENST00000370888 ZNF518AQ6AHZ1 1483 aa24.9■■□□□ 1.58
LRRC1-202ENST00000370888 FTSJ3Q8IY81 847 aaKnown RBP24.9■■□□□ 1.58
LRRC1-202ENST00000370888 IFT172Q9UG01 1749 aa24.9■■□□□ 1.58
LRRC1-202ENST00000370888 SHPRHQ149N8 1683 aa24.9■■□□□ 1.58
LRRC1-202ENST00000370888 NINLQ9Y2I6 1382 aa24.9■■□□□ 1.58
LRRC1-202ENST00000370888 NEURL4Q96JN8 1562 aa24.9■■□□□ 1.58
LRRC1-202ENST00000370888 PHF23Q9BUL5 403 aaPredicted RBP24.89■■□□□ 1.58
LRRC1-202ENST00000370888 MYH16Q9H6N6 1097 aa24.89■■□□□ 1.57
LRRC1-202ENST00000370888 QRICH2Q9H0J4 1663 aa24.89■■□□□ 1.57
LRRC1-202ENST00000370888 SPRYD3Q8NCJ5 442 aa24.87■■□□□ 1.57
LRRC1-202ENST00000370888 IQSEC2Q5JU85 1478 aa24.86■■□□□ 1.57
LRRC1-202ENST00000370888 MYO3AQ8NEV4 1616 aa24.86■■□□□ 1.57
LRRC1-202ENST00000370888 ADGRB1O14514 1584 aa24.86■■□□□ 1.57
LRRC1-202ENST00000370888 SMC4Q9NTJ3 1288 aa24.86■■□□□ 1.57
LRRC1-202ENST00000370888 EXOSC9Q06265 439 aaKnown RBP24.85■■□□□ 1.57
LRRC1-202ENST00000370888 RWDD1Q9H446 243 aaPredicted RBP24.85■■□□□ 1.57
LRRC1-202ENST00000370888 VGFO15240 615 aaPredicted RBP24.84■■□□□ 1.57
LRRC1-202ENST00000370888 MINK1Q8N4C8 1332 aaPredicted RBP24.84■■□□□ 1.57
LRRC1-202ENST00000370888 UPF2Q9HAU5 1272 aaKnown RBP24.83■■□□□ 1.57
LRRC1-202ENST00000370888 SETBP1Q9Y6X0 1596 aa24.83■■□□□ 1.57
LRRC1-202ENST00000370888 CD109Q6YHK3 1445 aa24.83■■□□□ 1.57
LRRC1-202ENST00000370888 BECN1Q14457 450 aa24.83■■□□□ 1.57
LRRC1-202ENST00000370888 MVPQ14764 893 aaKnown RBP24.83■■□□□ 1.57
LRRC1-202ENST00000370888 ZKSCAN2Q63HK3 967 aa24.83■■□□□ 1.57
LRRC1-202ENST00000370888 DZIP1LQ8IYY4 767 aaKnown RBP24.82■■□□□ 1.56
LRRC1-202ENST00000370888 ANKRD36BQ8N2N9 1353 aa24.82■■□□□ 1.56
LRRC1-202ENST00000370888 ANO8Q9HCE9 1232 aaPredicted RBP24.82■■□□□ 1.56
LRRC1-202ENST00000370888 LMTK2Q8IWU2 1503 aa24.81■■□□□ 1.56
LRRC1-202ENST00000370888 CCDC27Q2M243 656 aa24.81■■□□□ 1.56
LRRC1-202ENST00000370888 ITPRIPQ8IWB1 547 aa24.81■■□□□ 1.56
LRRC1-202ENST00000370888 IDI1Q13907 227 aa24.81■■□□□ 1.56
LRRC1-202ENST00000370888 RPGRIP1LQ68CZ1 1315 aa24.8■■□□□ 1.56
LRRC1-202ENST00000370888 A0A1W2PP64 1363 aa24.79■■□□□ 1.56
LRRC1-202ENST00000370888 PPLO60437 1756 aa24.78■■□□□ 1.56
LRRC1-202ENST00000370888 POGZQ7Z3K3 1410 aa24.78■■□□□ 1.56
LRRC1-202ENST00000370888 SSH1Q8WYL5 1049 aa24.78■■□□□ 1.56
LRRC1-202ENST00000370888 TULP4Q9NRJ4 1543 aa24.78■■□□□ 1.56
LRRC1-202ENST00000370888 POGKQ9P215 609 aa24.78■■□□□ 1.56
LRRC1-202ENST00000370888 FRMPD1Q5SYB0 1578 aa24.78■■□□□ 1.56
LRRC1-202ENST00000370888 TMPOP42166 694 aaKnown RBP24.78■■□□□ 1.56
LRRC1-202ENST00000370888 TRIM27P14373 513 aa24.77■■□□□ 1.56
LRRC1-202ENST00000370888 FBLN1P23142 703 aa24.77■■□□□ 1.56
LRRC1-202ENST00000370888 ARXQ96QS3 562 aa24.76■■□□□ 1.55
LRRC1-202ENST00000370888 GLI2P10070 1586 aa24.76■■□□□ 1.55
LRRC1-202ENST00000370888 MFAP1P55081 439 aaKnown RBP24.75■■□□□ 1.55
LRRC1-202ENST00000370888 PRAM1Q96QH2 718 aa24.75■■□□□ 1.55
LRRC1-202ENST00000370888 TRIM35Q9UPQ4 493 aa24.75■■□□□ 1.55
LRRC1-202ENST00000370888 TBC1D32Q96NH3 1257 aa24.75■■□□□ 1.55
LRRC1-202ENST00000370888 NOB1Q9ULX3 412 aaKnown RBP24.75■■□□□ 1.55
LRRC1-202ENST00000370888 ZC3H13Q5T200 1668 aaKnown RBP24.74■■□□□ 1.55
LRRC1-202ENST00000370888 NLRP1Q9C000 1473 aa24.74■■□□□ 1.55
LRRC1-202ENST00000370888 RIPK4P57078 832 aa24.74■■□□□ 1.55
LRRC1-202ENST00000370888 TBC1D2Q9BYX2 928 aa24.74■■□□□ 1.55
LRRC1-202ENST00000370888 ABCC3O15438 1527 aa24.74■■□□□ 1.55
LRRC1-202ENST00000370888 PLEKHF1Q96S99 279 aa24.73■■□□□ 1.55
LRRC1-202ENST00000370888 FYB1O15117 783 aa24.73■■□□□ 1.55
LRRC1-202ENST00000370888 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.73■■□□□ 1.55
LRRC1-202ENST00000370888 AAMPQ13685 434 aa24.71■■□□□ 1.55
LRRC1-202ENST00000370888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.7■■□□□ 1.542e-6■□□□□ 11.1
LRRC1-202ENST00000370888 TMEM57Q8N5G2 664 aa24.7■■□□□ 1.54
LRRC1-202ENST00000370888 ATF7IPQ6VMQ6 1270 aa24.69■■□□□ 1.54
LRRC1-202ENST00000370888 NSD2O96028 1365 aa24.69■■□□□ 1.54
LRRC1-202ENST00000370888 MLH3Q9UHC1 1453 aa24.68■■□□□ 1.54
LRRC1-202ENST00000370888 TERF2IPQ9NYB0 399 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms