RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
PRPF38B-202ENST00000370022 DCCP43146 1447 aa22■■□□□ 1.11
PRPF38B-202ENST00000370022 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
PRPF38B-202ENST00000370022 CENPJQ9HC77 1338 aaPredicted RBP21.98■■□□□ 1.11
PRPF38B-202ENST00000370022 NALCNQ8IZF0 1738 aa21.97■■□□□ 1.11
PRPF38B-202ENST00000370022 CADPS2Q86UW7 1296 aa21.96■■□□□ 1.11
PRPF38B-202ENST00000370022 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.11
PRPF38B-202ENST00000370022 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.95■■□□□ 1.1
PRPF38B-202ENST00000370022 ATF3P18847 181 aa21.95■■□□□ 1.1
PRPF38B-202ENST00000370022 CDC42BPGQ6DT37 1551 aa21.94■■□□□ 1.1
PRPF38B-202ENST00000370022 TOM1O60784 492 aa21.94■■□□□ 1.1
PRPF38B-202ENST00000370022 USP47Q96K76 1375 aa21.93■■□□□ 1.1
PRPF38B-202ENST00000370022 ADGRB2O60241 1585 aa21.93■■□□□ 1.1
PRPF38B-202ENST00000370022 SBNO2Q9Y2G9 1366 aa21.91■■□□□ 1.1
PRPF38B-202ENST00000370022 SLC24A1O60721 1099 aa21.91■■□□□ 1.1
PRPF38B-202ENST00000370022 MINK1Q8N4C8 1332 aaPredicted RBP21.9■■□□□ 1.1
PRPF38B-202ENST00000370022 QRICH2Q9H0J4 1663 aa21.9■■□□□ 1.1
PRPF38B-202ENST00000370022 UBAP1LF5GYI3 381 aa21.89■■□□□ 1.09
PRPF38B-202ENST00000370022 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
PRPF38B-202ENST00000370022 ST20-MTHFSA0A0A6YYL1 179 aa21.87■■□□□ 1.09
PRPF38B-202ENST00000370022 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
PRPF38B-202ENST00000370022 WASLO00401 505 aaPredicted RBP21.87■■□□□ 1.09
PRPF38B-202ENST00000370022 SLAIN2Q9P270 581 aa21.87■■□□□ 1.09
PRPF38B-202ENST00000370022 MST1RQ04912 1400 aa21.85■■□□□ 1.09
PRPF38B-202ENST00000370022 EVC2Q86UK5 1308 aa21.84■■□□□ 1.09
PRPF38B-202ENST00000370022 FMN2Q9NZ56 1722 aa21.84■■□□□ 1.09
PRPF38B-202ENST00000370022 ANKARQ7Z5J8 1434 aa21.83■■□□□ 1.09
PRPF38B-202ENST00000370022 TESK2Q96S53 571 aa21.82■■□□□ 1.08
PRPF38B-202ENST00000370022 C1orf167Q5SNV9 1468 aa21.82■■□□□ 1.08
PRPF38B-202ENST00000370022 CDK19Q9BWU1 502 aa21.82■■□□□ 1.08
PRPF38B-202ENST00000370022 TULP4Q9NRJ4 1543 aa21.81■■□□□ 1.08
PRPF38B-202ENST00000370022 HSPA5P11021 654 aaKnown RBP21.79■■□□□ 1.08
PRPF38B-202ENST00000370022 SRPK2P78362 688 aaKnown RBP21.78■■□□□ 1.08
PRPF38B-202ENST00000370022 PIP4K2BP78356 416 aa21.78■■□□□ 1.08
PRPF38B-202ENST00000370022 TMF1P82094 1093 aa21.78■■□□□ 1.08
PRPF38B-202ENST00000370022 PUS7Q96PZ0 661 aaKnown RBP21.77■■□□□ 1.08
PRPF38B-202ENST00000370022 NUTM2FA1L443 756 aa21.76■■□□□ 1.07
PRPF38B-202ENST00000370022 BRINP3Q76B58 766 aa21.75■■□□□ 1.07
PRPF38B-202ENST00000370022 NUDT16Q96DE0 195 aaKnown RBP21.75■■□□□ 1.07
PRPF38B-202ENST00000370022 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
PRPF38B-202ENST00000370022 ATP7BP35670 1465 aa21.75■■□□□ 1.07
PRPF38B-202ENST00000370022 CDCA8Q53HL2 280 aa21.74■■□□□ 1.07
PRPF38B-202ENST00000370022 ESCO1Q5FWF5 840 aa21.74■■□□□ 1.07
PRPF38B-202ENST00000370022 USP32Q8NFA0 1604 aa21.74■■□□□ 1.07
PRPF38B-202ENST00000370022 ROBO1Q9Y6N7 1651 aa21.74■■□□□ 1.07
PRPF38B-202ENST00000370022 CABP2Q9NPB3 220 aa21.74■■□□□ 1.07
PRPF38B-202ENST00000370022 CCDC61Q9Y6R9 512 aa21.74■■□□□ 1.07
PRPF38B-202ENST00000370022 PRR36Q9H6K5 1346 aa21.73■■□□□ 1.07
PRPF38B-202ENST00000370022 ATAD2Q6PL18 1390 aa21.73■■□□□ 1.07
PRPF38B-202ENST00000370022 ORAI2Q96SN7 254 aa21.73■■□□□ 1.07
PRPF38B-202ENST00000370022 KIF1AQ12756 1690 aa21.71■■□□□ 1.07
PRPF38B-202ENST00000370022 ITSN1Q15811 1721 aa21.71■■□□□ 1.07
PRPF38B-202ENST00000370022 PHF8Q9UPP1 1060 aa21.7■■□□□ 1.06
PRPF38B-202ENST00000370022 DISP3Q9P2K9 1392 aa21.7■■□□□ 1.06
PRPF38B-202ENST00000370022 TOPAZ1Q8N9V7 1692 aa21.68■■□□□ 1.06
PRPF38B-202ENST00000370022 RGPD8O14715 1765 aaPredicted RBP21.68■■□□□ 1.06
PRPF38B-202ENST00000370022 PPIP5K1Q6PFW1 1433 aa21.67■■□□□ 1.06
PRPF38B-202ENST00000370022 PLEKHG3A1L390 1219 aa21.67■■□□□ 1.06
PRPF38B-202ENST00000370022 AHDC1Q5TGY3 1603 aaPredicted RBP21.67■■□□□ 1.06
PRPF38B-202ENST00000370022 NPHP3Q7Z494 1330 aa21.66■■□□□ 1.06
PRPF38B-202ENST00000370022 NINLQ9Y2I6 1382 aa21.66■■□□□ 1.06
PRPF38B-202ENST00000370022 PMFBP1Q8TBY8 1022 aa21.65■■□□□ 1.06
PRPF38B-202ENST00000370022 NHSL1Q5SYE7 1610 aa21.64■■□□□ 1.05
PRPF38B-202ENST00000370022 CABP1Q9NZU7 370 aa21.64■■□□□ 1.05
PRPF38B-202ENST00000370022 POLR3AO14802 1390 aaPredicted RBP21.63■■□□□ 1.05
PRPF38B-202ENST00000370022 FOXO3O43524 673 aa21.63■■□□□ 1.05
PRPF38B-202ENST00000370022 NGDNQ8NEJ9 315 aaKnown RBP21.63■■□□□ 1.05
PRPF38B-202ENST00000370022 ACEP12821 1306 aa21.61■■□□□ 1.05
PRPF38B-202ENST00000370022 SOS2Q07890 1332 aaPredicted RBP21.6■■□□□ 1.05
PRPF38B-202ENST00000370022 PSME1Q06323 249 aa21.6■■□□□ 1.05
PRPF38B-202ENST00000370022 TMC1Q8TDI8 760 aa21.6■■□□□ 1.05
PRPF38B-202ENST00000370022 PHLPP1O60346 1717 aa21.59■■□□□ 1.05
PRPF38B-202ENST00000370022 HSPA1LP34931 641 aa21.59■■□□□ 1.05
PRPF38B-202ENST00000370022 ZNF692Q9BU19 519 aaPredicted RBP21.59■■□□□ 1.05
PRPF38B-202ENST00000370022 PXDNQ92626 1479 aa21.58■■□□□ 1.05
PRPF38B-202ENST00000370022 KRT28Q7Z3Y7 464 aa21.57■■□□□ 1.04
PRPF38B-202ENST00000370022 DDX17Q92841 729 aaKnown RBP21.57■■□□□ 1.04
PRPF38B-202ENST00000370022 BRD4O60885 1362 aaPredicted RBP21.57■■□□□ 1.04
PRPF38B-202ENST00000370022 C11orf95C9JLR9 678 aaPredicted RBP21.57■■□□□ 1.04
PRPF38B-202ENST00000370022 LRRC59Q96AG4 307 aaKnown RBP21.57■■□□□ 1.04
PRPF38B-202ENST00000370022 SLC12A5Q9H2X9 1139 aa21.57■■□□□ 1.04
PRPF38B-202ENST00000370022 TERF2IPQ9NYB0 399 aa21.57■■□□□ 1.04
PRPF38B-202ENST00000370022 COL16A1Q07092 1604 aaPredicted RBP21.56■■□□□ 1.04
PRPF38B-202ENST00000370022 CPSF1Q10570 1443 aaKnown RBP21.56■■□□□ 1.04
PRPF38B-202ENST00000370022 SBNO1A3KN83 1393 aa21.55■■□□□ 1.04
PRPF38B-202ENST00000370022 HDGFL2Q7Z4V5 671 aaPredicted RBP21.55■■□□□ 1.04
PRPF38B-202ENST00000370022 KIF7Q2M1P5 1343 aa21.55■■□□□ 1.04
PRPF38B-202ENST00000370022 USP6P35125 1406 aa21.53■■□□□ 1.04
PRPF38B-202ENST00000370022 XPCQ01831 940 aaPredicted RBP21.53■■□□□ 1.04
PRPF38B-202ENST00000370022 POLR3GLQ9BT43 218 aa21.53■■□□□ 1.04
PRPF38B-202ENST00000370022 CD163L1Q9NR16 1453 aa21.53■■□□□ 1.04
PRPF38B-202ENST00000370022 ANKRD36BQ8N2N9 1353 aa21.53■■□□□ 1.04
PRPF38B-202ENST00000370022 CCDC7Q96M83 1385 aa21.52■■□□□ 1.04
PRPF38B-202ENST00000370022 MYOM1P52179 1685 aa21.52■■□□□ 1.04
PRPF38B-202ENST00000370022 KTN1Q86UP2 1357 aaKnown RBP21.51■■□□□ 1.03
PRPF38B-202ENST00000370022 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
PRPF38B-202ENST00000370022 SPATA31A3Q5VYP0 1347 aa21.51■■□□□ 1.03
PRPF38B-202ENST00000370022 WASHC2AQ641Q2 1341 aa21.51■■□□□ 1.03
PRPF38B-202ENST00000370022 A0A1W2PP64 1363 aa21.51■■□□□ 1.03
PRPF38B-202ENST00000370022 JCADQ9P266 1359 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms