RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 NHSL1Q5SYE7 1610 aa30.02■■■□□ 2.4
SMNDC1-201ENST00000369592 CDC42BPGQ6DT37 1551 aa30.02■■■□□ 2.4
SMNDC1-201ENST00000369592 WAPLQ7Z5K2 1190 aa30.01■■■□□ 2.39
SMNDC1-201ENST00000369592 PLEKHH1Q9ULM0 1364 aa30.01■■■□□ 2.39
SMNDC1-201ENST00000369592 DLC1Q96QB1 1528 aa29.97■■■□□ 2.39
SMNDC1-201ENST00000369592 KDM2AQ9Y2K7 1162 aa29.97■■■□□ 2.39
SMNDC1-201ENST00000369592 JCADQ9P266 1359 aa29.95■■■□□ 2.39
SMNDC1-201ENST00000369592 TRIM26Q12899 539 aaPredicted RBP29.94■■■□□ 2.38
SMNDC1-201ENST00000369592 SHPRHQ149N8 1683 aa29.91■■■□□ 2.38
SMNDC1-201ENST00000369592 FMN2Q9NZ56 1722 aa29.89■■■□□ 2.38
SMNDC1-201ENST00000369592 KIAA1210Q9ULL0 1709 aa29.89■■■□□ 2.38
SMNDC1-201ENST00000369592 ORAI2Q96SN7 254 aa29.89■■■□□ 2.38
SMNDC1-201ENST00000369592 DDX17Q92841 729 aaKnown RBP29.85■■■□□ 2.37
SMNDC1-201ENST00000369592 PRAM1Q96QH2 718 aa29.85■■■□□ 2.37
SMNDC1-201ENST00000369592 SIN3AQ96ST3 1273 aa29.83■■■□□ 2.37
SMNDC1-201ENST00000369592 ADGRB2O60241 1585 aa29.82■■■□□ 2.36
SMNDC1-201ENST00000369592 SOS2Q07890 1332 aaPredicted RBP29.82■■■□□ 2.36
SMNDC1-201ENST00000369592 SPATA31A6Q5VVP1 1343 aa29.82■■■□□ 2.36
SMNDC1-201ENST00000369592 ARHGEF28Q8N1W1 1705 aaKnown RBP29.8■■■□□ 2.36
SMNDC1-201ENST00000369592 TRAK1Q9UPV9 953 aa29.8■■■□□ 2.36
SMNDC1-201ENST00000369592 LRP6O75581 1613 aa29.8■■■□□ 2.36
SMNDC1-201ENST00000369592 L3MBTL2Q969R5 705 aa29.79■■■□□ 2.36
SMNDC1-201ENST00000369592 LRRC59Q96AG4 307 aaKnown RBP29.78■■■□□ 2.36
SMNDC1-201ENST00000369592 RGPD8O14715 1765 aaPredicted RBP29.77■■■□□ 2.36
SMNDC1-201ENST00000369592 ESCO1Q5FWF5 840 aa29.75■■■□□ 2.35
SMNDC1-201ENST00000369592 PNPLA6Q8IY17 1366 aa29.75■■■□□ 2.35
SMNDC1-201ENST00000369592 PXDNQ92626 1479 aa29.74■■■□□ 2.35
SMNDC1-201ENST00000369592 POGKQ9P215 609 aa29.74■■■□□ 2.35
SMNDC1-201ENST00000369592 USP32Q8NFA0 1604 aa29.74■■■□□ 2.35
SMNDC1-201ENST00000369592 SAFB2Q14151 953 aaKnown RBP eCLIP29.73■■■□□ 2.35
SMNDC1-201ENST00000369592 NBPF1Q3BBV0 1214 aa29.73■■■□□ 2.35
SMNDC1-201ENST00000369592 UPF1Q92900 1129 aaKnown RBP eCLIP29.72■■■□□ 2.35
SMNDC1-201ENST00000369592 KIF1AQ12756 1690 aa29.72■■■□□ 2.35
SMNDC1-201ENST00000369592 NUTM2FA1L443 756 aa29.71■■■□□ 2.35
SMNDC1-201ENST00000369592 NPHP3Q7Z494 1330 aa29.71■■■□□ 2.35
SMNDC1-201ENST00000369592 ANKARQ7Z5J8 1434 aa29.69■■■□□ 2.34
SMNDC1-201ENST00000369592 COL22A1Q8NFW1 1626 aaPredicted RBP29.67■■■□□ 2.34
SMNDC1-201ENST00000369592 FOXO3O43524 673 aa29.67■■■□□ 2.34
SMNDC1-201ENST00000369592 NEUROD1Q13562 356 aa29.67■■■□□ 2.34
SMNDC1-201ENST00000369592 MEX3CQ5U5Q3 659 aaKnown RBP29.66■■■□□ 2.34
SMNDC1-201ENST00000369592 TRPM1Q7Z4N2 1603 aa29.66■■■□□ 2.34
SMNDC1-201ENST00000369592 MINK1Q8N4C8 1332 aaPredicted RBP29.65■■■□□ 2.34
SMNDC1-201ENST00000369592 ZNF772Q68DY9 489 aaPredicted RBP29.64■■■□□ 2.34
SMNDC1-201ENST00000369592 TULP4Q9NRJ4 1543 aa29.63■■■□□ 2.33
SMNDC1-201ENST00000369592 WASLO00401 505 aaPredicted RBP29.63■■■□□ 2.33
SMNDC1-201ENST00000369592 HIRIP3Q9BW71 556 aaPredicted RBP29.63■■■□□ 2.33
SMNDC1-201ENST00000369592 PHF8Q9UPP1 1060 aa29.62■■■□□ 2.33
SMNDC1-201ENST00000369592 PRR36Q9H6K5 1346 aa29.62■■■□□ 2.33
SMNDC1-201ENST00000369592 EIF3AQ14152 1382 aaKnown RBP29.59■■■□□ 2.33
SMNDC1-201ENST00000369592 XPCQ01831 940 aaPredicted RBP29.58■■■□□ 2.33
SMNDC1-201ENST00000369592 NUTM2BA6NNL0 878 aaPredicted RBP29.57■■■□□ 2.32
SMNDC1-201ENST00000369592 NUTM2EB1AL46 878 aaPredicted RBP29.57■■■□□ 2.32
SMNDC1-201ENST00000369592 NUTM2AQ8IVF1 878 aaPredicted RBP29.57■■■□□ 2.32
SMNDC1-201ENST00000369592 NBPF8Q3BBV2 869 aa29.56■■■□□ 2.32
SMNDC1-201ENST00000369592 SPATA31A3Q5VYP0 1347 aa29.55■■■□□ 2.32
SMNDC1-201ENST00000369592 ATP7BP35670 1465 aa29.55■■■□□ 2.32
SMNDC1-201ENST00000369592 KRT28Q7Z3Y7 464 aa29.54■■■□□ 2.32
SMNDC1-201ENST00000369592 GPRASP1Q5JY77 1395 aa29.53■■■□□ 2.32
SMNDC1-201ENST00000369592 SBNO1A3KN83 1393 aa29.52■■■□□ 2.32
SMNDC1-201ENST00000369592 RXRBP28702 533 aa29.51■■■□□ 2.31
SMNDC1-201ENST00000369592 TRPM3Q9HCF6 1732 aaPredicted RBP29.51■■■□□ 2.31
SMNDC1-201ENST00000369592 ITSN1Q15811 1721 aa29.5■■■□□ 2.31
SMNDC1-201ENST00000369592 CENPJQ9HC77 1338 aaPredicted RBP29.49■■■□□ 2.31
SMNDC1-201ENST00000369592 PMFBP1Q8TBY8 1022 aa29.49■■■□□ 2.31
SMNDC1-201ENST00000369592 CDK19Q9BWU1 502 aa29.49■■■□□ 2.31
SMNDC1-201ENST00000369592 TOPAZ1Q8N9V7 1692 aa29.49■■■□□ 2.31
SMNDC1-201ENST00000369592 QRICH2Q9H0J4 1663 aa29.49■■■□□ 2.31
SMNDC1-201ENST00000369592 TNS3Q68CZ2 1445 aa29.48■■■□□ 2.31
SMNDC1-201ENST00000369592 CDK12Q9NYV4 1490 aaPredicted RBP29.48■■■□□ 2.31
SMNDC1-201ENST00000369592 NUDT16Q96DE0 195 aaKnown RBP29.47■■■□□ 2.31
SMNDC1-201ENST00000369592 MARF1Q9Y4F3 1742 aaKnown RBP29.47■■■□□ 2.31
SMNDC1-201ENST00000369592 PSME1Q06323 249 aa29.46■■■□□ 2.31
SMNDC1-201ENST00000369592 ROCK2O75116 1388 aaKnown RBP29.46■■■□□ 2.31
SMNDC1-201ENST00000369592 AFF2P51816 1311 aa29.45■■■□□ 2.31
SMNDC1-201ENST00000369592 TONSLQ96HA7 1378 aa29.45■■■□□ 2.31
SMNDC1-201ENST00000369592 ALS2Q96Q42 1657 aa29.44■■■□□ 2.3
SMNDC1-201ENST00000369592 RALGAPBQ86X10 1494 aa29.42■■■□□ 2.3
SMNDC1-201ENST00000369592 ADAMTS2O95450 1211 aa29.42■■■□□ 2.3
SMNDC1-201ENST00000369592 C8orf37Q96NL8 207 aa29.42■■■□□ 2.3
SMNDC1-201ENST00000369592 POLR3AO14802 1390 aaPredicted RBP29.4■■■□□ 2.3
SMNDC1-201ENST00000369592 PLEKHG3A1L390 1219 aa29.4■■■□□ 2.3
SMNDC1-201ENST00000369592 FNBP4Q8N3X1 1017 aaPredicted RBP29.4■■■□□ 2.3
SMNDC1-201ENST00000369592 CCDC61Q9Y6R9 512 aa29.4■■■□□ 2.3
SMNDC1-201ENST00000369592 ABCA3Q99758 1704 aa29.4■■■□□ 2.3
SMNDC1-201ENST00000369592 ARHGEF10O15013 1369 aa29.39■■■□□ 2.29
SMNDC1-201ENST00000369592 NGLY1Q96IV0 654 aa29.36■■■□□ 2.29
SMNDC1-201ENST00000369592 RGS12O14924 1447 aa29.36■■■□□ 2.29
SMNDC1-201ENST00000369592 NGDNQ8NEJ9 315 aaKnown RBP29.35■■■□□ 2.29
SMNDC1-201ENST00000369592 PCGF6Q9BYE7 350 aa29.35■■■□□ 2.29
SMNDC1-201ENST00000369592 SRCAPQ6ZRS2 3230 aa29.34■■■□□ 2.29
SMNDC1-201ENST00000369592 CRYBG1Q9Y4K1 1723 aa29.34■■■□□ 2.29
SMNDC1-201ENST00000369592 CLSPNQ9HAW4 1339 aa29.33■■■□□ 2.29
SMNDC1-201ENST00000369592 BCL9LQ86UU0 1499 aa29.32■■■□□ 2.28
SMNDC1-201ENST00000369592 SBNO2Q9Y2G9 1366 aa29.32■■■□□ 2.28
SMNDC1-201ENST00000369592 CABP2Q9NPB3 220 aa29.32■■■□□ 2.28
SMNDC1-201ENST00000369592 ACEP12821 1306 aa29.31■■■□□ 2.28
SMNDC1-201ENST00000369592 SLIT2O94813 1529 aa29.3■■■□□ 2.28
SMNDC1-201ENST00000369592 CABLES1Q8TDN4 633 aa29.3■■■□□ 2.28
SMNDC1-201ENST00000369592 QTRT2Q9H974 415 aaKnown RBP29.3■■■□□ 2.28
SMNDC1-201ENST00000369592 SRPK2P78362 688 aaKnown RBP29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms