RNA–Protein interactions for RNA: ENST00000366959.4

RPS6KC1-201, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RPS6KC1, Length 5,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-201ENST00000366959 RNF20Q5VTR2 975 aa17.36■□□□□ 0.37
RPS6KC1-201ENST00000366959 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
RPS6KC1-201ENST00000366959 TRIM29Q14134 588 aa17.35■□□□□ 0.37
RPS6KC1-201ENST00000366959 SLC12A5Q9H2X9 1139 aa17.35■□□□□ 0.37
RPS6KC1-201ENST00000366959 CFTRP13569 1480 aa17.35■□□□□ 0.37
RPS6KC1-201ENST00000366959 ZNF771Q7L3S4 317 aaPredicted RBP17.35■□□□□ 0.37
RPS6KC1-201ENST00000366959 NASPP49321 788 aaPredicted RBP17.34■□□□□ 0.37
RPS6KC1-201ENST00000366959 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
RPS6KC1-201ENST00000366959 CEP89Q96ST8 783 aa17.34■□□□□ 0.37
RPS6KC1-201ENST00000366959 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
RPS6KC1-201ENST00000366959 CAVIN1Q6NZI2 390 aaKnown RBP17.34■□□□□ 0.37
RPS6KC1-201ENST00000366959 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
RPS6KC1-201ENST00000366959 R3HCC1Q9Y3T6 440 aaKnown RBP17.34■□□□□ 0.37
RPS6KC1-201ENST00000366959 DDX58O95786 925 aaKnown RBP17.33■□□□□ 0.37
RPS6KC1-201ENST00000366959 TPM1P09493 284 aa17.33■□□□□ 0.37
RPS6KC1-201ENST00000366959 IFT57Q9NWB7 429 aa17.33■□□□□ 0.37
RPS6KC1-201ENST00000366959 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
RPS6KC1-201ENST00000366959 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.36
RPS6KC1-201ENST00000366959 ROCK1Q13464 1354 aa17.33■□□□□ 0.36
RPS6KC1-201ENST00000366959 MRE11P49959 708 aa17.33■□□□□ 0.36
RPS6KC1-201ENST00000366959 CHMP4CQ96CF2 233 aa17.33■□□□□ 0.36
RPS6KC1-201ENST00000366959 NLRP6P59044 892 aa17.32■□□□□ 0.36
RPS6KC1-201ENST00000366959 TRDNQ13061 729 aa17.32■□□□□ 0.36
RPS6KC1-201ENST00000366959 PCMTD1Q96MG8 357 aaPredicted RBP17.32■□□□□ 0.36
RPS6KC1-201ENST00000366959 NEK4P51957 841 aa17.32■□□□□ 0.36
RPS6KC1-201ENST00000366959 UBTFL1P0CB47 393 aaPredicted RBP17.31■□□□□ 0.36
RPS6KC1-201ENST00000366959 KDM4AO75164 1064 aa17.31■□□□□ 0.36
RPS6KC1-201ENST00000366959 LRRFIP1Q32MZ4 808 aaKnown RBP17.31■□□□□ 0.36
RPS6KC1-201ENST00000366959 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
RPS6KC1-201ENST00000366959 NFXL1Q6ZNB6 911 aa17.31■□□□□ 0.36
RPS6KC1-201ENST00000366959 FAM69CQ0P6D2 419 aa17.31■□□□□ 0.36
RPS6KC1-201ENST00000366959 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
RPS6KC1-201ENST00000366959 CUX1P39880 1505 aa17.31■□□□□ 0.36
RPS6KC1-201ENST00000366959 MIA2Q96PC5 1412 aa17.3■□□□□ 0.36
RPS6KC1-201ENST00000366959 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
RPS6KC1-201ENST00000366959 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
RPS6KC1-201ENST00000366959 NLRP2Q9NX02 1062 aa17.3■□□□□ 0.36
RPS6KC1-201ENST00000366959 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
RPS6KC1-201ENST00000366959 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
RPS6KC1-201ENST00000366959 ERC2O15083 957 aa17.29■□□□□ 0.36
RPS6KC1-201ENST00000366959 PRPF40AO75400 957 aaKnown RBP17.29■□□□□ 0.36
RPS6KC1-201ENST00000366959 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
RPS6KC1-201ENST00000366959 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
RPS6KC1-201ENST00000366959 MSH5O43196 834 aa17.28■□□□□ 0.36
RPS6KC1-201ENST00000366959 MPNDQ8N594 471 aa17.28■□□□□ 0.36
RPS6KC1-201ENST00000366959 RAPGEF4Q8WZA2 1011 aa17.28■□□□□ 0.36
RPS6KC1-201ENST00000366959 DHX16O60231 1041 aaKnown RBP17.28■□□□□ 0.36
RPS6KC1-201ENST00000366959 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
RPS6KC1-201ENST00000366959 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
RPS6KC1-201ENST00000366959 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
RPS6KC1-201ENST00000366959 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.36
RPS6KC1-201ENST00000366959 FYCO1Q9BQS8 1478 aa17.27■□□□□ 0.36
RPS6KC1-201ENST00000366959 IPO7O95373 1038 aaKnown RBP17.27■□□□□ 0.36
RPS6KC1-201ENST00000366959 VPS37DQ86XT2 251 aa17.27■□□□□ 0.35
RPS6KC1-201ENST00000366959 PRAM1Q96QH2 718 aa17.27■□□□□ 0.35
RPS6KC1-201ENST00000366959 AAMPQ13685 434 aa17.26■□□□□ 0.35
RPS6KC1-201ENST00000366959 TWISTNBQ3B726 338 aaPredicted RBP17.26■□□□□ 0.35
RPS6KC1-201ENST00000366959 RRBP1Q9P2E9 1410 aaKnown RBP17.26■□□□□ 0.35
RPS6KC1-201ENST00000366959 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
RPS6KC1-201ENST00000366959 TPM2P07951 284 aa17.25■□□□□ 0.35
RPS6KC1-201ENST00000366959 FSD1Q9BTV5 496 aa17.25■□□□□ 0.35
RPS6KC1-201ENST00000366959 RALYLQ86SE5 291 aaKnown RBP17.24■□□□□ 0.35
RPS6KC1-201ENST00000366959 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
RPS6KC1-201ENST00000366959 FIBPO43427 364 aa17.24■□□□□ 0.35
RPS6KC1-201ENST00000366959 GPS2Q13227 327 aa17.24■□□□□ 0.35
RPS6KC1-201ENST00000366959 CLASRPQ8N2M8 674 aaKnown RBP17.24■□□□□ 0.35
RPS6KC1-201ENST00000366959 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
RPS6KC1-201ENST00000366959 PRM3Q9NNZ6 103 aa17.24■□□□□ 0.35
RPS6KC1-201ENST00000366959 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
RPS6KC1-201ENST00000366959 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
RPS6KC1-201ENST00000366959 FYB1O15117 783 aa17.23■□□□□ 0.35
RPS6KC1-201ENST00000366959 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
RPS6KC1-201ENST00000366959 ANKRD20A12PQ8NF67 263 aa17.23■□□□□ 0.35
RPS6KC1-201ENST00000366959 ATP2B1P20020 1258 aa17.22■□□□□ 0.35
RPS6KC1-201ENST00000366959 FAM177BA6PVY3 158 aa17.22■□□□□ 0.35
RPS6KC1-201ENST00000366959 PATL2C9JE40 543 aaKnown RBP17.22■□□□□ 0.35
RPS6KC1-201ENST00000366959 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
RPS6KC1-201ENST00000366959 ABTB2Q8N961 1025 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 CCDC70Q6NSX1 233 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 SULT6B1Q6IMI4 303 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 GNAI3P08754 354 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
RPS6KC1-201ENST00000366959 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
RPS6KC1-201ENST00000366959 ERICH2A1L162 156 aa17.2■□□□□ 0.34
RPS6KC1-201ENST00000366959 ARHGAP5Q13017 1502 aa17.2■□□□□ 0.34
RPS6KC1-201ENST00000366959 SAFBQ15424 915 aaKnown RBP eCLIP17.2■□□□□ 0.34
RPS6KC1-201ENST00000366959 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
RPS6KC1-201ENST00000366959 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
RPS6KC1-201ENST00000366959 CCDC39Q9UFE4 941 aa17.2■□□□□ 0.34
RPS6KC1-201ENST00000366959 HOOK1Q9UJC3 728 aaKnown RBP17.2■□□□□ 0.34
RPS6KC1-201ENST00000366959 PDILTQ8N807 584 aa17.19■□□□□ 0.34
RPS6KC1-201ENST00000366959 RBM10P98175 930 aaKnown RBP17.19■□□□□ 0.34
RPS6KC1-201ENST00000366959 RABEP1Q15276 862 aa17.18■□□□□ 0.34
RPS6KC1-201ENST00000366959 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms