RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 NWD1Q149M9 1564 aa14.88□□□□□ -0.03
H3F3A-202ENST00000366814 AMOTL2Q9Y2J4 779 aa14.88□□□□□ -0.03
H3F3A-202ENST00000366814 NEXMIFQ5QGS0 1516 aa14.88□□□□□ -0.03
H3F3A-202ENST00000366814 NKTRP30414 1462 aaKnown RBP14.88□□□□□ -0.03
H3F3A-202ENST00000366814 MYOM2P54296 1465 aa14.88□□□□□ -0.03
H3F3A-202ENST00000366814 C14orf37Q86TY3 774 aa14.87□□□□□ -0.03
H3F3A-202ENST00000366814 PIK3R4Q99570 1358 aa14.87□□□□□ -0.03
H3F3A-202ENST00000366814 HSPA1LP34931 641 aa14.86□□□□□ -0.03
H3F3A-202ENST00000366814 ALKQ9UM73 1620 aa14.85□□□□□ -0.03
H3F3A-202ENST00000366814 TMF1P82094 1093 aa14.85□□□□□ -0.03
H3F3A-202ENST00000366814 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
H3F3A-202ENST00000366814 KTN1Q86UP2 1357 aaKnown RBP14.85□□□□□ -0.03
H3F3A-202ENST00000366814 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
H3F3A-202ENST00000366814 SETBP1Q9Y6X0 1596 aa14.85□□□□□ -0.03
H3F3A-202ENST00000366814 MRS2Q9HD23 443 aa14.84□□□□□ -0.03
H3F3A-202ENST00000366814 MSH6P52701 1360 aa14.84□□□□□ -0.03
H3F3A-202ENST00000366814 NRXN3Q9Y4C0 1643 aa14.84□□□□□ -0.03
H3F3A-202ENST00000366814 PPLO60437 1756 aa14.83□□□□□ -0.04
H3F3A-202ENST00000366814 METP08581 1390 aa14.82□□□□□ -0.04
H3F3A-202ENST00000366814 PTPRUQ92729 1446 aa14.82□□□□□ -0.04
H3F3A-202ENST00000366814 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
H3F3A-202ENST00000366814 CDCA8Q53HL2 280 aa14.81□□□□□ -0.04
H3F3A-202ENST00000366814 HNRNPUQ00839 825 aaKnown RBP eCLIP14.8□□□□□ -0.04
H3F3A-202ENST00000366814 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
H3F3A-202ENST00000366814 TESK2Q96S53 571 aa14.8□□□□□ -0.04
H3F3A-202ENST00000366814 C19orf44Q9H6X5 657 aa14.8□□□□□ -0.04
H3F3A-202ENST00000366814 SLAIN2Q9P270 581 aa14.8□□□□□ -0.04
H3F3A-202ENST00000366814 NCOA3Q9Y6Q9 1424 aa14.8□□□□□ -0.04
H3F3A-202ENST00000366814 ATF3P18847 181 aa14.79□□□□□ -0.04
H3F3A-202ENST00000366814 ADGRF5Q8IZF2 1346 aa14.79□□□□□ -0.04
H3F3A-202ENST00000366814 RALBP1Q15311 655 aa14.78□□□□□ -0.04
H3F3A-202ENST00000366814 NRXN1Q9ULB1 1477 aa14.78□□□□□ -0.04
H3F3A-202ENST00000366814 DISP3Q9P2K9 1392 aa14.78□□□□□ -0.04
H3F3A-202ENST00000366814 FAM135BQ49AJ0 1406 aa14.77□□□□□ -0.04
H3F3A-202ENST00000366814 CADPS2Q86UW7 1296 aa14.77□□□□□ -0.05
H3F3A-202ENST00000366814 XRN1Q8IZH2 1706 aaKnown RBP14.77□□□□□ -0.05
H3F3A-202ENST00000366814 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
H3F3A-202ENST00000366814 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.76□□□□□ -0.05
H3F3A-202ENST00000366814 ROBO1Q9Y6N7 1651 aa14.75□□□□□ -0.05
H3F3A-202ENST00000366814 CCDC184Q52MB2 194 aa14.74□□□□□ -0.05
H3F3A-202ENST00000366814 MYBBP1AQ9BQG0 1328 aaKnown RBP14.74□□□□□ -0.05
H3F3A-202ENST00000366814 SETD1AO15047 1707 aaKnown RBP14.74□□□□□ -0.05
H3F3A-202ENST00000366814 CNGB1Q14028 1251 aaPredicted RBP14.74□□□□□ -0.05
H3F3A-202ENST00000366814 NEFLP07196 543 aa14.73□□□□□ -0.05
H3F3A-202ENST00000366814 FKBP8Q14318 412 aa14.73□□□□□ -0.05
H3F3A-202ENST00000366814 CFAP70Q5T0N1 1121 aa14.73□□□□□ -0.05
H3F3A-202ENST00000366814 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
H3F3A-202ENST00000366814 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
H3F3A-202ENST00000366814 STK26Q9P289 416 aa14.72□□□□□ -0.05
H3F3A-202ENST00000366814 PIK3C2GO75747 1445 aa14.72□□□□□ -0.05
H3F3A-202ENST00000366814 TMEM132EQ6IEE7 984 aa14.71□□□□□ -0.05
H3F3A-202ENST00000366814 ROBO2Q9HCK4 1378 aa14.7□□□□□ -0.06
H3F3A-202ENST00000366814 ZBED9Q6R2W3 1325 aa14.7□□□□□ -0.06
H3F3A-202ENST00000366814 PANK3Q9H999 370 aa14.69□□□□□ -0.06
H3F3A-202ENST00000366814 PARD3Q8TEW0 1356 aa14.69□□□□□ -0.06
H3F3A-202ENST00000366814 SUPT16HQ9Y5B9 1047 aaKnown RBP14.69□□□□□ -0.06
H3F3A-202ENST00000366814 PER1O15534 1290 aaPredicted RBP14.68□□□□□ -0.06
H3F3A-202ENST00000366814 DCCP43146 1447 aa14.68□□□□□ -0.06
H3F3A-202ENST00000366814 PTCH1Q13635 1447 aa14.68□□□□□ -0.06
H3F3A-202ENST00000366814 NLRP13Q86W25 1043 aa14.68□□□□□ -0.06
H3F3A-202ENST00000366814 C14orf93Q9H972 538 aaKnown RBP14.68□□□□□ -0.06
H3F3A-202ENST00000366814 ADGRL3Q9HAR2 1447 aa14.68□□□□□ -0.06
H3F3A-202ENST00000366814 SBNO2Q9Y2G9 1366 aa14.68□□□□□ -0.06
H3F3A-202ENST00000366814 PHLPP1O60346 1717 aa14.68□□□□□ -0.06
H3F3A-202ENST00000366814 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
H3F3A-202ENST00000366814 NALCNQ8IZF0 1738 aa14.67□□□□□ -0.06
H3F3A-202ENST00000366814 KNSTRNQ9Y448 316 aa14.66□□□□□ -0.06
H3F3A-202ENST00000366814 LRPPRCP42704 1394 aaKnown RBP14.66□□□□□ -0.06
H3F3A-202ENST00000366814 BRINP3Q76B58 766 aa14.65□□□□□ -0.06
H3F3A-202ENST00000366814 WAPLQ7Z5K2 1190 aa14.65□□□□□ -0.06
H3F3A-202ENST00000366814 CENPJQ9HC77 1338 aaPredicted RBP14.65□□□□□ -0.06
H3F3A-202ENST00000366814 MED1Q15648 1581 aaPredicted RBP14.65□□□□□ -0.06
H3F3A-202ENST00000366814 MST1RQ04912 1400 aa14.64□□□□□ -0.07
H3F3A-202ENST00000366814 ABCC11Q96J66 1382 aa14.64□□□□□ -0.07
H3F3A-202ENST00000366814 PNISRQ8TF01 805 aaKnown RBP14.64□□□□□ -0.07
H3F3A-202ENST00000366814 YTHDC2Q9H6S0 1430 aaKnown RBP14.64□□□□□ -0.07
H3F3A-202ENST00000366814 MYOM1P52179 1685 aa14.64□□□□□ -0.07
H3F3A-202ENST00000366814 ADGRB1O14514 1584 aa14.64□□□□□ -0.07
H3F3A-202ENST00000366814 QRICH2Q9H0J4 1663 aa14.63□□□□□ -0.07
H3F3A-202ENST00000366814 CC2D1BQ5T0F9 858 aaKnown RBP14.63□□□□□ -0.07
H3F3A-202ENST00000366814 ASXL1Q8IXJ9 1541 aa14.62□□□□□ -0.07
H3F3A-202ENST00000366814 ILDR2Q71H61 639 aa14.62□□□□□ -0.07
H3F3A-202ENST00000366814 TECPR2O15040 1411 aa14.61□□□□□ -0.07
H3F3A-202ENST00000366814 TRAK1Q9UPV9 953 aa14.61□□□□□ -0.07
H3F3A-202ENST00000366814 KNDC1Q76NI1 1749 aa14.61□□□□□ -0.07
H3F3A-202ENST00000366814 JCADQ9P266 1359 aa14.6□□□□□ -0.07
H3F3A-202ENST00000366814 SIRT1Q96EB6 747 aa14.6□□□□□ -0.07
H3F3A-202ENST00000366814 PLEKHH1Q9ULM0 1364 aa14.6□□□□□ -0.07
H3F3A-202ENST00000366814 C1orf167Q5SNV9 1468 aa14.6□□□□□ -0.07
H3F3A-202ENST00000366814 ORAI2Q96SN7 254 aa14.59□□□□□ -0.07
H3F3A-202ENST00000366814 POGKQ9P215 609 aa14.59□□□□□ -0.07
H3F3A-202ENST00000366814 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
H3F3A-202ENST00000366814 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
H3F3A-202ENST00000366814 COL16A1Q07092 1604 aaPredicted RBP14.59□□□□□ -0.07
H3F3A-202ENST00000366814 SAFB2Q14151 953 aaKnown RBP eCLIP14.59□□□□□ -0.07
H3F3A-202ENST00000366814 DDX17Q92841 729 aaKnown RBP14.59□□□□□ -0.07
H3F3A-202ENST00000366814 NUTM2FA1L443 756 aa14.58□□□□□ -0.08
H3F3A-202ENST00000366814 PRAM1Q96QH2 718 aa14.58□□□□□ -0.08
H3F3A-202ENST00000366814 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.08
H3F3A-202ENST00000366814 ESCO1Q5FWF5 840 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms