RNA–Protein interactions for RNA: ENST00000365233.1

RNU4-12P-201, Transcript of RNA, U4 small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4-12P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-12P-201ENST00000365233 GDF9O60383 454 aa8.9□□□□□ -0.98
RNU4-12P-201ENST00000365233 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.98
RNU4-12P-201ENST00000365233 REPIN1Q9BWE0 567 aaKnown RBP8.9□□□□□ -0.98
RNU4-12P-201ENST00000365233 SSTR3P32745 418 aaPredicted RBP8.89□□□□□ -0.99
RNU4-12P-201ENST00000365233 NUTM1Q86Y26 1132 aa8.89□□□□□ -0.99
RNU4-12P-201ENST00000365233 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
RNU4-12P-201ENST00000365233 DGAT1O75907 488 aa8.87□□□□□ -0.99
RNU4-12P-201ENST00000365233 CD2BP2O95400 341 aaKnown RBP8.87□□□□□ -0.99
RNU4-12P-201ENST00000365233 TTLL12Q14166 644 aaPredicted RBP8.87□□□□□ -0.99
RNU4-12P-201ENST00000365233 HLA-CQ95604 372 aa8.87□□□□□ -0.99
RNU4-12P-201ENST00000365233 GIGYF2Q6Y7W6 1299 aaKnown RBP8.85□□□□□ -0.99
RNU4-12P-201ENST00000365233 PKD2L1Q9P0L9 805 aa8.85□□□□□ -0.99
RNU4-12P-201ENST00000365233 ZBTB24O43167 697 aaPredicted RBP8.84□□□□□ -0.99
RNU4-12P-201ENST00000365233 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
RNU4-12P-201ENST00000365233 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
RNU4-12P-201ENST00000365233 AK7Q96M32 723 aa8.84□□□□□ -0.99
RNU4-12P-201ENST00000365233 TNFRSF10AO00220 468 aa8.83□□□□□ -1
RNU4-12P-201ENST00000365233 TRIM66O15016 1216 aa8.83□□□□□ -1
RNU4-12P-201ENST00000365233 FDX1P10109 184 aa8.83□□□□□ -1
RNU4-12P-201ENST00000365233 GUCA2AQ02747 115 aa8.83□□□□□ -1
RNU4-12P-201ENST00000365233 PKDCCQ504Y2 493 aa8.83□□□□□ -1
RNU4-12P-201ENST00000365233 JUNDP17535 347 aa8.82□□□□□ -1
RNU4-12P-201ENST00000365233 PARP9Q8IXQ6 854 aa8.82□□□□□ -1
RNU4-12P-201ENST00000365233 GJA5P36382 358 aa8.81□□□□□ -1
RNU4-12P-201ENST00000365233 DIXDC1Q155Q3 683 aa8.81□□□□□ -1
RNU4-12P-201ENST00000365233 TRIM32Q13049 653 aa8.8□□□□□ -1
RNU4-12P-201ENST00000365233 PCDHGC3Q9UN70 934 aa8.8□□□□□ -1
RNU4-12P-201ENST00000365233 FAM187AA6NFU0 413 aa8.79□□□□□ -1
RNU4-12P-201ENST00000365233 MYT1Q01538 1121 aa8.79□□□□□ -1
RNU4-12P-201ENST00000365233 FOXC1Q12948 553 aa8.79□□□□□ -1
RNU4-12P-201ENST00000365233 BEGAINQ9BUH8 593 aa8.79□□□□□ -1
RNU4-12P-201ENST00000365233 TOR4AQ9NXH8 423 aa8.79□□□□□ -1
RNU4-12P-201ENST00000365233 WNT7AO00755 349 aa8.78□□□□□ -1
RNU4-12P-201ENST00000365233 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
RNU4-12P-201ENST00000365233 MOXD2PA6NHM9 499 aa8.77□□□□□ -1.01
RNU4-12P-201ENST00000365233 SPDYE5A6NIY4 337 aa8.77□□□□□ -1.01
RNU4-12P-201ENST00000365233 C6orf229H3BNL8 230 aa8.77□□□□□ -1.01
RNU4-12P-201ENST00000365233 MS4A1P11836 297 aa8.76□□□□□ -1.01
RNU4-12P-201ENST00000365233 NDUFV2P19404 249 aa8.76□□□□□ -1.01
RNU4-12P-201ENST00000365233 CYP4X1Q8N118 509 aa8.76□□□□□ -1.01
RNU4-12P-201ENST00000365233 TBC1D2Q9BYX2 928 aa8.76□□□□□ -1.01
RNU4-12P-201ENST00000365233 AVPP01185 164 aa8.75□□□□□ -1.01
RNU4-12P-201ENST00000365233 WNT7BP56706 349 aa8.75□□□□□ -1.01
RNU4-12P-201ENST00000365233 DESI1Q6ICB0 168 aa8.75□□□□□ -1.01
RNU4-12P-201ENST00000365233 CRIPAKQ8N1N5 446 aa8.75□□□□□ -1.01
RNU4-12P-201ENST00000365233 CCDC24Q8N4L8 307 aa8.75□□□□□ -1.01
RNU4-12P-201ENST00000365233 NUDT12Q9BQG2 462 aa8.75□□□□□ -1.01
RNU4-12P-201ENST00000365233 PDE4DQ08499 809 aa8.74□□□□□ -1.01
RNU4-12P-201ENST00000365233 MTMR2Q13614 643 aa8.74□□□□□ -1.01
RNU4-12P-201ENST00000365233 PTPRNQ16849 979 aa8.74□□□□□ -1.01
RNU4-12P-201ENST00000365233 RSBN1LQ6PCB5 846 aaPredicted RBP8.74□□□□□ -1.01
RNU4-12P-201ENST00000365233 SPTLC1O15269 473 aa8.73□□□□□ -1.01
RNU4-12P-201ENST00000365233 CCNYL3P0C7X3 344 aa8.72□□□□□ -1.01
RNU4-12P-201ENST00000365233 ZNF787Q6DD87 383 aa8.72□□□□□ -1.01
RNU4-12P-201ENST00000365233 SNIP1Q8TAD8 396 aaKnown RBP8.72□□□□□ -1.01
RNU4-12P-201ENST00000365233 SLC24A3Q9HC58 644 aa8.72□□□□□ -1.01
RNU4-12P-201ENST00000365233 TTC24A2A3L6 582 aaPredicted RBP8.71□□□□□ -1.02
RNU4-12P-201ENST00000365233 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.02
RNU4-12P-201ENST00000365233 PRPF38BQ5VTL8 546 aaKnown RBP8.71□□□□□ -1.02
RNU4-12P-201ENST00000365233 PRR7Q8TB68 274 aa8.71□□□□□ -1.02
RNU4-12P-201ENST00000365233 AAASQ9NRG9 546 aa8.71□□□□□ -1.02
RNU4-12P-201ENST00000365233 SMCPP49901 116 aaPredicted RBP8.7□□□□□ -1.02
RNU4-12P-201ENST00000365233 SKOR1P84550 965 aa8.7□□□□□ -1.02
RNU4-12P-201ENST00000365233 TUSC1Q2TAM9 212 aa8.7□□□□□ -1.02
RNU4-12P-201ENST00000365233 BCANQ96GW7 911 aa8.7□□□□□ -1.02
RNU4-12P-201ENST00000365233 MRGPRX2Q96LB1 330 aa8.7□□□□□ -1.02
RNU4-12P-201ENST00000365233 RC3H1Q5TC82 1133 aaKnown RBP8.69□□□□□ -1.02
RNU4-12P-201ENST00000365233 ZBTB3Q9H5J0 574 aa8.69□□□□□ -1.02
RNU4-12P-201ENST00000365233 EVA1BQ9NVM1 165 aa8.69□□□□□ -1.02
RNU4-12P-201ENST00000365233 PTCRAQ6ISU1 281 aaPredicted RBP8.68□□□□□ -1.02
RNU4-12P-201ENST00000365233 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
RNU4-12P-201ENST00000365233 SMPD1P17405 629 aa8.67□□□□□ -1.02
RNU4-12P-201ENST00000365233 KCNH2Q12809 1159 aa8.67□□□□□ -1.02
RNU4-12P-201ENST00000365233 PCDHB15Q9Y5E8 787 aa8.67□□□□□ -1.02
RNU4-12P-201ENST00000365233 AXIN1O15169 862 aa8.66□□□□□ -1.02
RNU4-12P-201ENST00000365233 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
RNU4-12P-201ENST00000365233 SLC24A1O60721 1099 aa8.66□□□□□ -1.02
RNU4-12P-201ENST00000365233 HRCP23327 699 aa8.66□□□□□ -1.02
RNU4-12P-201ENST00000365233 MYSM1Q5VVJ2 828 aa8.66□□□□□ -1.02
RNU4-12P-201ENST00000365233 LYPD8Q6UX82 237 aa8.66□□□□□ -1.02
RNU4-12P-201ENST00000365233 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
RNU4-12P-201ENST00000365233 CFAP99D6REC4 459 aa8.63□□□□□ -1.03
RNU4-12P-201ENST00000365233 J3QL48 77 aa8.63□□□□□ -1.03
RNU4-12P-201ENST00000365233 SIAH2O43255 324 aa8.63□□□□□ -1.03
RNU4-12P-201ENST00000365233 SH3BP2P78314 561 aa8.63□□□□□ -1.03
RNU4-12P-201ENST00000365233 EHBP1Q8NDI1 1231 aa8.62□□□□□ -1.03
RNU4-12P-201ENST00000365233 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
RNU4-12P-201ENST00000365233 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
RNU4-12P-201ENST00000365233 LILRB3O75022 631 aa8.61□□□□□ -1.03
RNU4-12P-201ENST00000365233 F12P00748 615 aaPredicted RBP8.61□□□□□ -1.03
RNU4-12P-201ENST00000365233 POTECB2RU33 542 aa8.6□□□□□ -1.03
RNU4-12P-201ENST00000365233 ZNF511Q8NB15 262 aa8.6□□□□□ -1.03
RNU4-12P-201ENST00000365233 CABLES1Q8TDN4 633 aa8.6□□□□□ -1.03
RNU4-12P-201ENST00000365233 VARSP26640 1264 aaKnown RBP8.59□□□□□ -1.03
RNU4-12P-201ENST00000365233 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
RNU4-12P-201ENST00000365233 MPNDQ8N594 471 aa8.59□□□□□ -1.03
RNU4-12P-201ENST00000365233 BAP1Q92560 729 aa8.59□□□□□ -1.03
RNU4-12P-201ENST00000365233 QPCTQ16769 361 aa8.58□□□□□ -1.04
RNU4-12P-201ENST00000365233 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
RNU4-12P-201ENST00000365233 HPS1Q92902 700 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms