RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 UQCRHP07919 91 aa15.9■□□□□ 0.14
VAMP1-201ENST00000361716 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
VAMP1-201ENST00000361716 MBD5Q9P267 1494 aa15.9■□□□□ 0.14
VAMP1-201ENST00000361716 GGT6Q6P531 493 aa15.9■□□□□ 0.14
VAMP1-201ENST00000361716 GOLGA6L22H0YM25 854 aa15.89■□□□□ 0.13
VAMP1-201ENST00000361716 RWDD1Q9H446 243 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-201ENST00000361716 SYCP2Q9BX26 1530 aa15.89■□□□□ 0.13
VAMP1-201ENST00000361716 SPAG9O60271 1321 aaKnown RBP15.89■□□□□ 0.13
VAMP1-201ENST00000361716 RALGAPBQ86X10 1494 aa15.89■□□□□ 0.13
VAMP1-201ENST00000361716 ZSCAN30Q86W11 494 aa15.88■□□□□ 0.13
VAMP1-201ENST00000361716 KIF3BO15066 747 aa15.88■□□□□ 0.13
VAMP1-201ENST00000361716 PTMAP06454 111 aaKnown RBP15.88■□□□□ 0.13
VAMP1-201ENST00000361716 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-201ENST00000361716 TSR2Q969E8 191 aaKnown RBP15.88■□□□□ 0.13
VAMP1-201ENST00000361716 FOXD4L5Q5VV16 416 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-201ENST00000361716 FOXD4L4Q8WXT5 416 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-201ENST00000361716 SMC4Q9NTJ3 1288 aa15.87■□□□□ 0.13
VAMP1-201ENST00000361716 MYO5CQ9NQX4 1742 aa15.87■□□□□ 0.13
VAMP1-201ENST00000361716 TRAPPC8Q9Y2L5 1435 aa15.87■□□□□ 0.13
VAMP1-201ENST00000361716 CALD1Q05682 793 aaKnown RBP15.87■□□□□ 0.13
VAMP1-201ENST00000361716 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
VAMP1-201ENST00000361716 TMEM132EQ6IEE7 984 aa15.86■□□□□ 0.13
VAMP1-201ENST00000361716 ELL2O00472 640 aaPredicted RBP15.86■□□□□ 0.13
VAMP1-201ENST00000361716 SLC12A5Q9H2X9 1139 aa15.86■□□□□ 0.13
VAMP1-201ENST00000361716 STK26Q9P289 416 aa15.86■□□□□ 0.13
VAMP1-201ENST00000361716 MLECQ14165 292 aa15.85■□□□□ 0.13
VAMP1-201ENST00000361716 SCAPERQ9BY12 1400 aa15.85■□□□□ 0.13
VAMP1-201ENST00000361716 APBB1O00213 710 aa15.85■□□□□ 0.13
VAMP1-201ENST00000361716 RLBP1P12271 317 aa15.85■□□□□ 0.13
VAMP1-201ENST00000361716 MAST1Q9Y2H9 1570 aa15.85■□□□□ 0.13
VAMP1-201ENST00000361716 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
VAMP1-201ENST00000361716 RIPK4P57078 832 aa15.84■□□□□ 0.13
VAMP1-201ENST00000361716 CCDC173Q0VFZ6 552 aa15.84■□□□□ 0.13
VAMP1-201ENST00000361716 WWC1Q8IX03 1113 aa15.84■□□□□ 0.13
VAMP1-201ENST00000361716 RNF214Q8ND24 703 aa15.83■□□□□ 0.12
VAMP1-201ENST00000361716 ARHGEF12Q9NZN5 1544 aa15.83■□□□□ 0.12
VAMP1-201ENST00000361716 MCTP1Q6DN14 999 aa15.82■□□□□ 0.12
VAMP1-201ENST00000361716 SSFA2P28290 1259 aa15.82■□□□□ 0.12
VAMP1-201ENST00000361716 EIF3AQ14152 1382 aaKnown RBP15.82■□□□□ 0.12
VAMP1-201ENST00000361716 KDM5CP41229 1560 aa15.82■□□□□ 0.12
VAMP1-201ENST00000361716 TRHP20396 242 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-201ENST00000361716 MTHFSP49914 203 aa15.82■□□□□ 0.12
VAMP1-201ENST00000361716 AAMPQ13685 434 aa15.82■□□□□ 0.12
VAMP1-201ENST00000361716 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
VAMP1-201ENST00000361716 LNPKQ9C0E8 428 aa15.82■□□□□ 0.12
VAMP1-201ENST00000361716 KDM5DQ9BY66 1539 aa15.81■□□□□ 0.12
VAMP1-201ENST00000361716 OFD1O75665 1012 aa15.81■□□□□ 0.12
VAMP1-201ENST00000361716 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
VAMP1-201ENST00000361716 PRAG1Q86YV5 1406 aa15.81■□□□□ 0.12
VAMP1-201ENST00000361716 TSC1Q92574 1164 aa15.81■□□□□ 0.12
VAMP1-201ENST00000361716 PRDM4Q9UKN5 801 aa15.81■□□□□ 0.12
VAMP1-201ENST00000361716 WDR7Q9Y4E6 1490 aa15.8■□□□□ 0.12
VAMP1-201ENST00000361716 FAM177BA6PVY3 158 aa15.8■□□□□ 0.12
VAMP1-201ENST00000361716 PLEKHH2Q8IVE3 1493 aa15.8■□□□□ 0.12
VAMP1-201ENST00000361716 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
VAMP1-201ENST00000361716 CBX1P83916 185 aa15.79■□□□□ 0.12
VAMP1-201ENST00000361716 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-201ENST00000361716 BLMP54132 1417 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-201ENST00000361716 JARID2Q92833 1246 aaPredicted RBP15.79■□□□□ 0.12
VAMP1-201ENST00000361716 ZMYM4Q5VZL5 1548 aa15.79■□□□□ 0.12
VAMP1-201ENST00000361716 IGSF3O75054 1194 aa15.78■□□□□ 0.12
VAMP1-201ENST00000361716 SKOR2Q2VWA4 1001 aaPredicted RBP15.78■□□□□ 0.12
VAMP1-201ENST00000361716 FOXD4L6Q3SYB3 417 aaPredicted RBP15.78■□□□□ 0.12
VAMP1-201ENST00000361716 FOXD4L3Q6VB84 417 aaPredicted RBP15.78■□□□□ 0.12
VAMP1-201ENST00000361716 PLCH2O75038 1416 aa15.78■□□□□ 0.12
VAMP1-201ENST00000361716 FANCAO15360 1455 aa15.78■□□□□ 0.12
VAMP1-201ENST00000361716 PLCB2Q00722 1185 aa15.78■□□□□ 0.12
VAMP1-201ENST00000361716 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.12
VAMP1-201ENST00000361716 CD109Q6YHK3 1445 aa15.77■□□□□ 0.12
VAMP1-201ENST00000361716 ARAP3Q8WWN8 1544 aa15.77■□□□□ 0.12
VAMP1-201ENST00000361716 C1orf115Q9H7X2 142 aa15.77■□□□□ 0.11
VAMP1-201ENST00000361716 CCDC141Q6ZP82 1450 aa15.77■□□□□ 0.11
VAMP1-201ENST00000361716 PLXNC1O60486 1568 aa15.77■□□□□ 0.11
VAMP1-201ENST00000361716 RARSP54136 660 aaKnown RBP15.77■□□□□ 0.11
VAMP1-201ENST00000361716 UHRF1BP1Q6BDS2 1440 aa15.76■□□□□ 0.11
VAMP1-201ENST00000361716 SRPK2P78362 688 aaKnown RBP15.75■□□□□ 0.11
VAMP1-201ENST00000361716 CARD14Q9BXL6 1004 aa15.75■□□□□ 0.11
VAMP1-201ENST00000361716 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
VAMP1-201ENST00000361716 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
VAMP1-201ENST00000361716 EXOSC9Q06265 439 aaKnown RBP15.75■□□□□ 0.11
VAMP1-201ENST00000361716 MAP7D2Q96T17 732 aa15.75■□□□□ 0.11
VAMP1-201ENST00000361716 RBM27Q9P2N5 1060 aaKnown RBP15.75■□□□□ 0.11
VAMP1-201ENST00000361716 ZKSCAN2Q63HK3 967 aa15.74■□□□□ 0.11
VAMP1-201ENST00000361716 BBXQ8WY36 941 aaPredicted RBP15.74■□□□□ 0.11
VAMP1-201ENST00000361716 ISY1Q9ULR0 285 aaKnown RBP15.74■□□□□ 0.11
VAMP1-201ENST00000361716 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
VAMP1-201ENST00000361716 GGNBP2Q9H3C7 697 aa15.74■□□□□ 0.11
VAMP1-201ENST00000361716 ADGRL1O94910 1474 aa15.73■□□□□ 0.11
VAMP1-201ENST00000361716 ANKRD45Q5TZF3 282 aa15.73■□□□□ 0.11
VAMP1-201ENST00000361716 ABCA9Q8IUA7 1624 aa15.73■□□□□ 0.11
VAMP1-201ENST00000361716 ABCC1P33527 1531 aa15.72■□□□□ 0.11
VAMP1-201ENST00000361716 PRPF40AO75400 957 aaKnown RBP15.72■□□□□ 0.11
VAMP1-201ENST00000361716 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
VAMP1-201ENST00000361716 UNC13BO14795 1591 aa15.72■□□□□ 0.11
VAMP1-201ENST00000361716 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
VAMP1-201ENST00000361716 CHAMP1Q96JM3 812 aa15.72■□□□□ 0.11
VAMP1-201ENST00000361716 FGD1P98174 961 aa15.71■□□□□ 0.11
VAMP1-201ENST00000361716 CABP2Q9NPB3 220 aa15.71■□□□□ 0.11
VAMP1-201ENST00000361716 ADGRF5Q8IZF2 1346 aa15.71■□□□□ 0.11
VAMP1-201ENST00000361716 A2MP01023 1474 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms