RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 PDE4AP27815 886 aa20.85■□□□□ 0.93
COL4A2-201ENST00000360467 LNPKQ9C0E8 428 aa20.84■□□□□ 0.93
COL4A2-201ENST00000360467 DNAJC2Q99543 621 aaKnown RBP20.84■□□□□ 0.93
COL4A2-201ENST00000360467 DCAF8L1A6NGE4 600 aa20.83■□□□□ 0.93
COL4A2-201ENST00000360467 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
COL4A2-201ENST00000360467 TXNDC2Q86VQ3 553 aa20.83■□□□□ 0.93
COL4A2-201ENST00000360467 DDX11L8A8MPP1 907 aa20.83■□□□□ 0.92
COL4A2-201ENST00000360467 TPM1P09493 284 aa20.83■□□□□ 0.92
COL4A2-201ENST00000360467 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.92
COL4A2-201ENST00000360467 API5Q9BZZ5 524 aaKnown RBP20.83■□□□□ 0.92
COL4A2-201ENST00000360467 PANK1Q8TE04 598 aa20.82■□□□□ 0.92
COL4A2-201ENST00000360467 KIF6Q6ZMV9 814 aa20.81■□□□□ 0.92
COL4A2-201ENST00000360467 AFAP1Q8N556 730 aa20.8■□□□□ 0.92
COL4A2-201ENST00000360467 UBTFL1P0CB47 393 aaPredicted RBP20.79■□□□□ 0.92
COL4A2-201ENST00000360467 CCDC47Q96A33 483 aaKnown RBP20.79■□□□□ 0.92
COL4A2-201ENST00000360467 ATP6V1DQ9Y5K8 247 aa20.79■□□□□ 0.92
COL4A2-201ENST00000360467 XPCQ01831 940 aaPredicted RBP20.79■□□□□ 0.92
COL4A2-201ENST00000360467 REC8O95072 547 aa20.79■□□□□ 0.92
COL4A2-201ENST00000360467 RNF20Q5VTR2 975 aa20.79■□□□□ 0.92
COL4A2-201ENST00000360467 GPRASP1Q5JY77 1395 aa20.79■□□□□ 0.92
COL4A2-201ENST00000360467 GNAI1P63096 354 aa20.78■□□□□ 0.92
COL4A2-201ENST00000360467 SF3B2Q13435 895 aaKnown RBP20.78■□□□□ 0.92
COL4A2-201ENST00000360467 ROCK1Q13464 1354 aa20.77■□□□□ 0.92
COL4A2-201ENST00000360467 TNNT3P45378 269 aaPredicted RBP20.77■□□□□ 0.92
COL4A2-201ENST00000360467 C1orf115Q9H7X2 142 aa20.77■□□□□ 0.92
COL4A2-201ENST00000360467 RRP12Q5JTH9 1297 aaKnown RBP20.77■□□□□ 0.92
COL4A2-201ENST00000360467 RALYLQ86SE5 291 aaKnown RBP20.77■□□□□ 0.92
COL4A2-201ENST00000360467 NAP1L1P55209 391 aaKnown RBP20.76■□□□□ 0.91
COL4A2-201ENST00000360467 ATP2B2Q01814 1243 aa20.76■□□□□ 0.91
COL4A2-201ENST00000360467 MIA2Q96PC5 1412 aa20.76■□□□□ 0.91
COL4A2-201ENST00000360467 PRAM1Q96QH2 718 aa20.76■□□□□ 0.91
COL4A2-201ENST00000360467 SMC3Q9UQE7 1217 aa20.76■□□□□ 0.91
COL4A2-201ENST00000360467 TMEM132AQ24JP5 1023 aa20.75■□□□□ 0.91
COL4A2-201ENST00000360467 ERC2O15083 957 aa20.75■□□□□ 0.91
COL4A2-201ENST00000360467 TOM1L2Q6ZVM7 507 aa20.74■□□□□ 0.91
COL4A2-201ENST00000360467 CFAP70Q5T0N1 1121 aa20.74■□□□□ 0.91
COL4A2-201ENST00000360467 CHMP4CQ96CF2 233 aa20.74■□□□□ 0.91
COL4A2-201ENST00000360467 FSD1Q9BTV5 496 aa20.74■□□□□ 0.91
COL4A2-201ENST00000360467 CCAR1Q8IX12 1150 aaKnown RBP20.74■□□□□ 0.91
COL4A2-201ENST00000360467 MYL6BP14649 208 aa20.73■□□□□ 0.91
COL4A2-201ENST00000360467 MTHFSP49914 203 aa20.73■□□□□ 0.91
COL4A2-201ENST00000360467 INTS3Q68E01 1043 aaKnown RBP20.73■□□□□ 0.91
COL4A2-201ENST00000360467 CNNM1Q9NRU3 951 aa20.72■□□□□ 0.91
COL4A2-201ENST00000360467 ATP2B1P20020 1258 aa20.72■□□□□ 0.91
COL4A2-201ENST00000360467 MYOM3Q5VTT5 1437 aa20.72■□□□□ 0.91
COL4A2-201ENST00000360467 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.72■□□□□ 0.913e-10■■■■■ 153.8
COL4A2-201ENST00000360467 MAP4K4O95819 1239 aaPredicted RBP20.71■□□□□ 0.91
COL4A2-201ENST00000360467 SAFBQ15424 915 aaKnown RBP eCLIP20.71■□□□□ 0.91
COL4A2-201ENST00000360467 SIL1Q9H173 461 aa20.71■□□□□ 0.91
COL4A2-201ENST00000360467 ANKRD20A12PQ8NF67 263 aa20.71■□□□□ 0.91
COL4A2-201ENST00000360467 RBM5P52756 815 aaKnown RBP eCLIP20.7■□□□□ 0.9
COL4A2-201ENST00000360467 CABP4P57796 275 aa20.7■□□□□ 0.9
COL4A2-201ENST00000360467 TTC39AQ5SRH9 613 aa20.7■□□□□ 0.9
COL4A2-201ENST00000360467 SPINK5Q9NQ38 1064 aaPredicted RBP20.7■□□□□ 0.9
COL4A2-201ENST00000360467 BICDL1Q6ZP65 573 aa20.69■□□□□ 0.9
COL4A2-201ENST00000360467 ZBED9Q6R2W3 1325 aa20.69■□□□□ 0.9
COL4A2-201ENST00000360467 ZFYVE27Q5T4F4 411 aa20.69■□□□□ 0.9
COL4A2-201ENST00000360467 HOOK1Q9UJC3 728 aaKnown RBP20.69■□□□□ 0.9
COL4A2-201ENST00000360467 CT47A1Q5JQC4 288 aaPredicted RBP20.69■□□□□ 0.9
COL4A2-201ENST00000360467 PRKAR2BP31323 418 aa20.68■□□□□ 0.9
COL4A2-201ENST00000360467 PLEKHO1Q53GL0 409 aaPredicted RBP20.68■□□□□ 0.9
COL4A2-201ENST00000360467 HOMER1Q86YM7 354 aa20.68■□□□□ 0.9
COL4A2-201ENST00000360467 SURF6O75683 361 aaKnown RBP20.68■□□□□ 0.9
COL4A2-201ENST00000360467 EPS15P42566 896 aa20.68■□□□□ 0.9
COL4A2-201ENST00000360467 HSP90AB4PQ58FF6 505 aa20.68■□□□□ 0.9
COL4A2-201ENST00000360467 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
COL4A2-201ENST00000360467 IPO7O95373 1038 aaKnown RBP20.67■□□□□ 0.9
COL4A2-201ENST00000360467 KIF7Q2M1P5 1343 aa20.67■□□□□ 0.9
COL4A2-201ENST00000360467 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
COL4A2-201ENST00000360467 CCDC70Q6NSX1 233 aa20.67■□□□□ 0.9
COL4A2-201ENST00000360467 CCDC30Q5VVM6 783 aa20.67■□□□□ 0.9
COL4A2-201ENST00000360467 SASS6Q6UVJ0 657 aa20.66■□□□□ 0.9
COL4A2-201ENST00000360467 TBC1D2BQ9UPU7 963 aa20.66■□□□□ 0.9
COL4A2-201ENST00000360467 CDK19Q9BWU1 502 aa20.66■□□□□ 0.9
COL4A2-201ENST00000360467 ADAMTS8Q9UP79 889 aa20.66■□□□□ 0.9
COL4A2-201ENST00000360467 R3HCC1Q9Y3T6 440 aaKnown RBP20.66■□□□□ 0.9
COL4A2-201ENST00000360467 TTLL5Q6EMB2 1281 aa20.66■□□□□ 0.9
COL4A2-201ENST00000360467 BRMS1Q9HCU9 246 aa20.66■□□□□ 0.9
COL4A2-201ENST00000360467 CNTROBQ8N137 903 aa20.65■□□□□ 0.9
COL4A2-201ENST00000360467 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
COL4A2-201ENST00000360467 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
COL4A2-201ENST00000360467 ODF2Q5BJF6 829 aa20.65■□□□□ 0.9
COL4A2-201ENST00000360467 PDILTQ8N807 584 aa20.64■□□□□ 0.89
COL4A2-201ENST00000360467 IBSPP21815 317 aaPredicted RBP20.63■□□□□ 0.89
COL4A2-201ENST00000360467 TSR2Q969E8 191 aaKnown RBP20.63■□□□□ 0.89
COL4A2-201ENST00000360467 CEBPZQ03701 1054 aaKnown RBP20.63■□□□□ 0.89
COL4A2-201ENST00000360467 ANKRD50Q9ULJ7 1429 aa20.63■□□□□ 0.89
COL4A2-201ENST00000360467 SKOR2Q2VWA4 1001 aaPredicted RBP20.62■□□□□ 0.89
COL4A2-201ENST00000360467 FGD6Q6ZV73 1430 aa20.62■□□□□ 0.89
COL4A2-201ENST00000360467 IGF1RP08069 1367 aa20.62■□□□□ 0.89
COL4A2-201ENST00000360467 CCDC85AQ96PX6 553 aaPredicted RBP20.62■□□□□ 0.89
COL4A2-201ENST00000360467 SULT6B1Q6IMI4 303 aa20.62■□□□□ 0.89
COL4A2-201ENST00000360467 GAS2L2Q8NHY3 880 aa20.62■□□□□ 0.89
COL4A2-201ENST00000360467 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
COL4A2-201ENST00000360467 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
COL4A2-201ENST00000360467 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
COL4A2-201ENST00000360467 CCDC73Q6ZRK6 1079 aa20.61■□□□□ 0.89
COL4A2-201ENST00000360467 CUX1P39880 1505 aa20.6■□□□□ 0.89
COL4A2-201ENST00000360467 CNTLNQ9NXG0 1405 aa20.6■□□□□ 0.89
COL4A2-201ENST00000360467 STK3Q13188 491 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms