RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 SLC12A5Q9H2X9 1139 aa28.28■■■□□ 2.12
FAM3A-202ENST00000359889 ATAD2Q6PL18 1390 aa28.28■■■□□ 2.12
FAM3A-202ENST00000359889 CABP2Q9NPB3 220 aa28.27■■■□□ 2.12
FAM3A-202ENST00000359889 NRXN3Q9Y4C0 1643 aa28.27■■■□□ 2.12
FAM3A-202ENST00000359889 METP08581 1390 aa28.26■■■□□ 2.12
FAM3A-202ENST00000359889 SLIT1O75093 1534 aa28.26■■■□□ 2.11
FAM3A-202ENST00000359889 CARD14Q9BXL6 1004 aa28.26■■■□□ 2.11
FAM3A-202ENST00000359889 SETD1AO15047 1707 aaKnown RBP28.25■■■□□ 2.11
FAM3A-202ENST00000359889 LTKP29376 864 aa28.24■■■□□ 2.11
FAM3A-202ENST00000359889 ARHGAP23Q9P227 1491 aa28.24■■■□□ 2.11
FAM3A-202ENST00000359889 ZBED9Q6R2W3 1325 aa28.23■■■□□ 2.11
FAM3A-202ENST00000359889 FAM135BQ49AJ0 1406 aa28.22■■■□□ 2.11
FAM3A-202ENST00000359889 ANKRD36BQ8N2N9 1353 aa28.22■■■□□ 2.11
FAM3A-202ENST00000359889 PPP2R1AP30153 589 aa28.21■■■□□ 2.11
FAM3A-202ENST00000359889 NSD3Q9BZ95 1437 aa28.21■■■□□ 2.11
FAM3A-202ENST00000359889 TECPR2O15040 1411 aa28.21■■■□□ 2.11
FAM3A-202ENST00000359889 RIMS1Q86UR5 1692 aaKnown RBP28.2■■■□□ 2.11
FAM3A-202ENST00000359889 ADAMTS13Q76LX8 1427 aa28.2■■■□□ 2.1
FAM3A-202ENST00000359889 WAPLQ7Z5K2 1190 aa28.2■■■□□ 2.1
FAM3A-202ENST00000359889 CDK19Q9BWU1 502 aa28.2■■■□□ 2.1
FAM3A-202ENST00000359889 CGNL1Q0VF96 1302 aa28.19■■■□□ 2.1
FAM3A-202ENST00000359889 TERF2IPQ9NYB0 399 aa28.18■■■□□ 2.1
FAM3A-202ENST00000359889 ADAMTSL3P82987 1691 aa28.17■■■□□ 2.1
FAM3A-202ENST00000359889 TBX22Q9Y458 520 aa28.15■■■□□ 2.1
FAM3A-202ENST00000359889 PLEKHH1Q9ULM0 1364 aa28.14■■■□□ 2.1
FAM3A-202ENST00000359889 CEP170BQ9Y4F5 1589 aaPredicted RBP28.14■■■□□ 2.1
FAM3A-202ENST00000359889 KNDC1Q76NI1 1749 aa28.14■■■□□ 2.09
FAM3A-202ENST00000359889 INSRP06213 1382 aa28.13■■■□□ 2.09
FAM3A-202ENST00000359889 NSD2O96028 1365 aa28.13■■■□□ 2.09
FAM3A-202ENST00000359889 HDGFL2Q7Z4V5 671 aaPredicted RBP28.12■■■□□ 2.09
FAM3A-202ENST00000359889 MORC1Q86VD1 984 aa28.12■■■□□ 2.09
FAM3A-202ENST00000359889 CPS1P31327 1500 aa28.12■■■□□ 2.09
FAM3A-202ENST00000359889 MED14O60244 1454 aa28.12■■■□□ 2.09
FAM3A-202ENST00000359889 SLC26A8Q96RN1 970 aa28.11■■■□□ 2.09
FAM3A-202ENST00000359889 WASLO00401 505 aaPredicted RBP28.1■■■□□ 2.09
FAM3A-202ENST00000359889 USP32Q8NFA0 1604 aa28.1■■■□□ 2.09
FAM3A-202ENST00000359889 DIP2AQ14689 1571 aa28.08■■■□□ 2.09
FAM3A-202ENST00000359889 WDR43Q15061 677 aaKnown RBP eCLIP28.08■■■□□ 2.09
FAM3A-202ENST00000359889 A0A1W2PP64 1363 aa28.07■■■□□ 2.08
FAM3A-202ENST00000359889 ANKLE2Q86XL3 938 aa28.06■■■□□ 2.08
FAM3A-202ENST00000359889 CABP1Q9NZU7 370 aa28.05■■■□□ 2.08
FAM3A-202ENST00000359889 ROBO2Q9HCK4 1378 aa28.05■■■□□ 2.08
FAM3A-202ENST00000359889 AMOTL2Q9Y2J4 779 aa28.03■■■□□ 2.08
FAM3A-202ENST00000359889 NEFLP07196 543 aa28.02■■■□□ 2.08
FAM3A-202ENST00000359889 PIK3R4Q99570 1358 aa28■■■□□ 2.07
FAM3A-202ENST00000359889 ATP7BP35670 1465 aa28■■■□□ 2.07
FAM3A-202ENST00000359889 ZNF142P52746 1687 aaPredicted RBP27.99■■■□□ 2.07
FAM3A-202ENST00000359889 NUDT16Q96DE0 195 aaKnown RBP27.98■■■□□ 2.07
FAM3A-202ENST00000359889 PTPRUQ92729 1446 aa27.98■■■□□ 2.07
FAM3A-202ENST00000359889 CCDC61Q9Y6R9 512 aa27.98■■■□□ 2.07
FAM3A-202ENST00000359889 BLMP54132 1417 aaPredicted RBP27.97■■■□□ 2.07
FAM3A-202ENST00000359889 PTCH1Q13635 1447 aa27.97■■■□□ 2.07
FAM3A-202ENST00000359889 CD163L1Q9NR16 1453 aa27.97■■■□□ 2.07
FAM3A-202ENST00000359889 POLR3AO14802 1390 aaPredicted RBP27.96■■■□□ 2.07
FAM3A-202ENST00000359889 CFAP53Q96M91 514 aa27.95■■■□□ 2.07
FAM3A-202ENST00000359889 ADAMTS8Q9UP79 889 aa27.95■■■□□ 2.07
FAM3A-202ENST00000359889 PPIP5K1Q6PFW1 1433 aa27.95■■■□□ 2.06
FAM3A-202ENST00000359889 TNNT2P45379 298 aaPredicted RBP27.94■■■□□ 2.06
FAM3A-202ENST00000359889 SETD1BQ9UPS6 1966 aaKnown RBP27.93■■■□□ 2.06
FAM3A-202ENST00000359889 ADGRB2O60241 1585 aa27.92■■■□□ 2.06
FAM3A-202ENST00000359889 SMG6Q86US8 1419 aaKnown RBP27.91■■■□□ 2.06
FAM3A-202ENST00000359889 FYB1O15117 783 aa27.9■■■□□ 2.06
FAM3A-202ENST00000359889 PDE3BQ13370 1112 aa27.9■■■□□ 2.06
FAM3A-202ENST00000359889 ZNF692Q9BU19 519 aaPredicted RBP27.89■■■□□ 2.06
FAM3A-202ENST00000359889 GGNBP2Q9H3C7 697 aa27.89■■■□□ 2.06
FAM3A-202ENST00000359889 NUDCQ9Y266 331 aa27.89■■■□□ 2.05
FAM3A-202ENST00000359889 CPSF1Q10570 1443 aaKnown RBP27.87■■■□□ 2.05
FAM3A-202ENST00000359889 MTHFSP49914 203 aa27.87■■■□□ 2.05
FAM3A-202ENST00000359889 EDC4Q6P2E9 1401 aaKnown RBP27.86■■■□□ 2.05
FAM3A-202ENST00000359889 SUPT16HQ9Y5B9 1047 aaKnown RBP27.86■■■□□ 2.05
FAM3A-202ENST00000359889 FKBP8Q14318 412 aa27.84■■■□□ 2.05
FAM3A-202ENST00000359889 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.83■■■□□ 2.05
FAM3A-202ENST00000359889 CDC42BPGQ6DT37 1551 aa27.83■■■□□ 2.05
FAM3A-202ENST00000359889 KCNA6P17658 529 aa27.83■■■□□ 2.05
FAM3A-202ENST00000359889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.83■■■□□ 2.05
FAM3A-202ENST00000359889 XRN1Q8IZH2 1706 aaKnown RBP27.82■■■□□ 2.04
FAM3A-202ENST00000359889 PRR36Q9H6K5 1346 aa27.82■■■□□ 2.04
FAM3A-202ENST00000359889 SENP3-EIF4A1A0A087X0R7 540 aa27.82■■■□□ 2.04
FAM3A-202ENST00000359889 SALL2Q9Y467 1007 aaPredicted RBP27.82■■■□□ 2.04
FAM3A-202ENST00000359889 NPHP4O75161 1426 aaPredicted RBP27.82■■■□□ 2.04
FAM3A-202ENST00000359889 PLEKHG3A1L390 1219 aa27.8■■■□□ 2.04
FAM3A-202ENST00000359889 NGEFQ8N5V2 710 aa27.8■■■□□ 2.04
FAM3A-202ENST00000359889 NCKAP5LQ9HCH0 1330 aa27.77■■■□□ 2.04
FAM3A-202ENST00000359889 ANKRD26Q9UPS8 1709 aa27.76■■■□□ 2.04
FAM3A-202ENST00000359889 NUTM2FA1L443 756 aa27.74■■■□□ 2.03
FAM3A-202ENST00000359889 KIF20BQ96Q89 1820 aa27.73■■■□□ 2.03
FAM3A-202ENST00000359889 ACEP12821 1306 aa27.73■■■□□ 2.03
FAM3A-202ENST00000359889 CCDC146Q8IYE0 955 aa27.72■■■□□ 2.03
FAM3A-202ENST00000359889 COG3Q96JB2 828 aa27.72■■■□□ 2.03
FAM3A-202ENST00000359889 ANKARQ7Z5J8 1434 aa27.72■■■□□ 2.03
FAM3A-202ENST00000359889 NME9Q86XW9 330 aa27.7■■■□□ 2.03
FAM3A-202ENST00000359889 RUNDC1Q96C34 613 aa27.69■■■□□ 2.02
FAM3A-202ENST00000359889 ITSN1Q15811 1721 aa27.69■■■□□ 2.02
FAM3A-202ENST00000359889 TOPAZ1Q8N9V7 1692 aa27.69■■■□□ 2.02
FAM3A-202ENST00000359889 MON2Q7Z3U7 1717 aa27.68■■■□□ 2.02
FAM3A-202ENST00000359889 APAF1O14727 1248 aa27.68■■■□□ 2.02
FAM3A-202ENST00000359889 ERICH6BQ5W0A0 696 aa27.68■■■□□ 2.02
FAM3A-202ENST00000359889 TTC21BQ7Z4L5 1316 aa27.67■■■□□ 2.02
FAM3A-202ENST00000359889 U2AF1L5P0DN76 240 aaPredicted RBP27.67■■■□□ 2.02
FAM3A-202ENST00000359889 U2AF1Q01081 240 aaKnown RBP eCLIP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms