RNA–Protein interactions for RNA: ENST00000359062.3

PDE3A-201, Transcript of phosphodiesterase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE3A, Length 7,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-201ENST00000359062 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
PDE3A-201ENST00000359062 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
PDE3A-201ENST00000359062 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
PDE3A-201ENST00000359062 SKIDA1Q1XH10 827 aa18.73■□□□□ 0.59
PDE3A-201ENST00000359062 RBM33Q96EV2 1170 aaKnown RBP18.73■□□□□ 0.59
PDE3A-201ENST00000359062 WASHC4Q2M389 1173 aa18.73■□□□□ 0.59
PDE3A-201ENST00000359062 RIC3Q7Z5B4 369 aa18.73■□□□□ 0.59
PDE3A-201ENST00000359062 CAGE1Q8TC20 777 aa18.73■□□□□ 0.59
PDE3A-201ENST00000359062 KLHL34Q8N239 644 aa18.73■□□□□ 0.59
PDE3A-201ENST00000359062 FAM43AQ8N2R8 423 aa18.73■□□□□ 0.59
PDE3A-201ENST00000359062 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
PDE3A-201ENST00000359062 NUCB2P80303 420 aa18.72■□□□□ 0.59
PDE3A-201ENST00000359062 RALYLQ86SE5 291 aaKnown RBP18.72■□□□□ 0.59
PDE3A-201ENST00000359062 ARGLU1Q9NWB6 273 aaPredicted RBP18.72■□□□□ 0.59
PDE3A-201ENST00000359062 ERC2O15083 957 aa18.72■□□□□ 0.59
PDE3A-201ENST00000359062 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
PDE3A-201ENST00000359062 C22orf23Q9BZE7 217 aa18.71■□□□□ 0.59
PDE3A-201ENST00000359062 NAT10Q9H0A0 1025 aaKnown RBP18.71■□□□□ 0.58
PDE3A-201ENST00000359062 BRMS1Q9HCU9 246 aa18.71■□□□□ 0.58
PDE3A-201ENST00000359062 CDR1P51861 262 aa18.7■□□□□ 0.58
PDE3A-201ENST00000359062 NOM1Q5C9Z4 860 aaKnown RBP18.7■□□□□ 0.58
PDE3A-201ENST00000359062 MAP7D2Q96T17 732 aa18.7■□□□□ 0.58
PDE3A-201ENST00000359062 ACBD3Q9H3P7 528 aa18.7■□□□□ 0.58
PDE3A-201ENST00000359062 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
PDE3A-201ENST00000359062 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
PDE3A-201ENST00000359062 HSP90B2PQ58FF3 399 aa18.68■□□□□ 0.58
PDE3A-201ENST00000359062 R3HCC1Q9Y3T6 440 aaKnown RBP18.68■□□□□ 0.58
PDE3A-201ENST00000359062 OFD1O75665 1012 aa18.67■□□□□ 0.58
PDE3A-201ENST00000359062 NASPP49321 788 aaPredicted RBP18.67■□□□□ 0.58
PDE3A-201ENST00000359062 IKQ13123 557 aaPredicted RBP18.67■□□□□ 0.58
PDE3A-201ENST00000359062 PANK1Q8TE04 598 aa18.67■□□□□ 0.58
PDE3A-201ENST00000359062 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.66■□□□□ 0.58
PDE3A-201ENST00000359062 RNF214Q8ND24 703 aa18.65■□□□□ 0.58
PDE3A-201ENST00000359062 CCDC173Q0VFZ6 552 aa18.65■□□□□ 0.58
PDE3A-201ENST00000359062 CNTROBQ8N137 903 aa18.65■□□□□ 0.58
PDE3A-201ENST00000359062 NUTM2GQ5VZR2 741 aa18.65■□□□□ 0.58
PDE3A-201ENST00000359062 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
PDE3A-201ENST00000359062 XBP1P17861 261 aa18.65■□□□□ 0.58
PDE3A-201ENST00000359062 SDF4Q9BRK5 362 aa18.65■□□□□ 0.58
PDE3A-201ENST00000359062 FANCIQ9NVI1 1328 aa18.64■□□□□ 0.57
PDE3A-201ENST00000359062 SMC2O95347 1197 aa18.64■□□□□ 0.57
PDE3A-201ENST00000359062 HSP90AB4PQ58FF6 505 aa18.64■□□□□ 0.57
PDE3A-201ENST00000359062 DHX57Q6P158 1386 aaKnown RBP18.64■□□□□ 0.57
PDE3A-201ENST00000359062 UBTFL1P0CB47 393 aaPredicted RBP18.63■□□□□ 0.57
PDE3A-201ENST00000359062 BRPF1P55201 1214 aaPredicted RBP18.63■□□□□ 0.57
PDE3A-201ENST00000359062 PSMA5P28066 241 aa18.62■□□□□ 0.57
PDE3A-201ENST00000359062 TMEM132AQ24JP5 1023 aa18.62■□□□□ 0.57
PDE3A-201ENST00000359062 GNAI1P63096 354 aa18.62■□□□□ 0.57
PDE3A-201ENST00000359062 JPH4Q96JJ6 628 aa18.61■□□□□ 0.57
PDE3A-201ENST00000359062 CAVIN1Q6NZI2 390 aaKnown RBP18.61■□□□□ 0.57
PDE3A-201ENST00000359062 NFKBIBQ15653 356 aa18.61■□□□□ 0.57
PDE3A-201ENST00000359062 TRIM5Q9C035 493 aa18.6■□□□□ 0.57
PDE3A-201ENST00000359062 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
PDE3A-201ENST00000359062 CDC45O75419 566 aa18.6■□□□□ 0.57
PDE3A-201ENST00000359062 H0YHG0 523 aa18.6■□□□□ 0.57
PDE3A-201ENST00000359062 DNAJC2Q99543 621 aaKnown RBP18.6■□□□□ 0.57
PDE3A-201ENST00000359062 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
PDE3A-201ENST00000359062 FAM177BA6PVY3 158 aa18.6■□□□□ 0.57
PDE3A-201ENST00000359062 FSD1Q9BTV5 496 aa18.6■□□□□ 0.57
PDE3A-201ENST00000359062 CEBPZQ03701 1054 aaKnown RBP18.59■□□□□ 0.57
PDE3A-201ENST00000359062 MYO6Q9UM54 1294 aa18.59■□□□□ 0.57
PDE3A-201ENST00000359062 CDK5RAP3Q96JB5 506 aa18.59■□□□□ 0.57
PDE3A-201ENST00000359062 ATP2B1P20020 1258 aa18.59■□□□□ 0.57
PDE3A-201ENST00000359062 MAGEC2Q9UBF1 373 aaPredicted RBP18.58■□□□□ 0.57
PDE3A-201ENST00000359062 FMNL2Q96PY5 1086 aa18.58■□□□□ 0.56
PDE3A-201ENST00000359062 DCTN1Q14203 1278 aa18.58■□□□□ 0.56
PDE3A-201ENST00000359062 SPC24Q8NBT2 197 aa18.58■□□□□ 0.56
PDE3A-201ENST00000359062 LETM1O95202 739 aaPredicted RBP18.57■□□□□ 0.56
PDE3A-201ENST00000359062 STK11IPQ8N1F8 1099 aa18.57■□□□□ 0.56
PDE3A-201ENST00000359062 CCDC191Q8NCU4 936 aa18.56■□□□□ 0.56
PDE3A-201ENST00000359062 KINO60870 393 aaKnown RBP18.56■□□□□ 0.56
PDE3A-201ENST00000359062 SART3Q15020 963 aaKnown RBP18.56■□□□□ 0.56
PDE3A-201ENST00000359062 SMARCE1Q969G3 411 aa18.56■□□□□ 0.56
PDE3A-201ENST00000359062 TSPY26PQ9H489 355 aa18.56■□□□□ 0.56
PDE3A-201ENST00000359062 CABP2Q9NPB3 220 aa18.56■□□□□ 0.56
PDE3A-201ENST00000359062 CWC15Q9P013 229 aaKnown RBP18.56■□□□□ 0.56
PDE3A-201ENST00000359062 RDXP35241 583 aaKnown RBP18.56■□□□□ 0.56
PDE3A-201ENST00000359062 ATF3P18847 181 aa18.55■□□□□ 0.56
PDE3A-201ENST00000359062 ERCC4Q92889 916 aaPredicted RBP18.55■□□□□ 0.56
PDE3A-201ENST00000359062 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
PDE3A-201ENST00000359062 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
PDE3A-201ENST00000359062 TRAK2O60296 914 aa18.55■□□□□ 0.56
PDE3A-201ENST00000359062 FILIP1LQ4L180 1135 aa18.54■□□□□ 0.56
PDE3A-201ENST00000359062 GGNBP2Q9H3C7 697 aa18.54■□□□□ 0.56
PDE3A-201ENST00000359062 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
PDE3A-201ENST00000359062 KIF6Q6ZMV9 814 aa18.54■□□□□ 0.56
PDE3A-201ENST00000359062 SYCP1Q15431 976 aa18.54■□□□□ 0.56
PDE3A-201ENST00000359062 C1orf115Q9H7X2 142 aa18.54■□□□□ 0.56
PDE3A-201ENST00000359062 MRE11P49959 708 aa18.54■□□□□ 0.56
PDE3A-201ENST00000359062 PRPF40AO75400 957 aaKnown RBP18.53■□□□□ 0.56
PDE3A-201ENST00000359062 WWC2Q6AWC2 1192 aa18.53■□□□□ 0.56
PDE3A-201ENST00000359062 NLRP2Q9NX02 1062 aa18.53■□□□□ 0.56
PDE3A-201ENST00000359062 PLCD4Q9BRC7 762 aa18.52■□□□□ 0.56
PDE3A-201ENST00000359062 TXLNAP40222 546 aa18.52■□□□□ 0.56
PDE3A-201ENST00000359062 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
PDE3A-201ENST00000359062 KRT18P05783 430 aaKnown RBP18.51■□□□□ 0.55
PDE3A-201ENST00000359062 PAF1Q8N7H5 531 aa18.51■□□□□ 0.55
PDE3A-201ENST00000359062 SURF6O75683 361 aaKnown RBP18.51■□□□□ 0.55
PDE3A-201ENST00000359062 NEFHP12036 1026 aa18.51■□□□□ 0.55
PDE3A-201ENST00000359062 TTC39AQ5SRH9 613 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms