RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 FBXO41Q8TF61 875 aa34.56■■■■□ 3.12
ALKAL1-201ENST00000358543 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.55■■■■□ 3.12
ALKAL1-201ENST00000358543 ATF3P18847 181 aa34.55■■■■□ 3.12
ALKAL1-201ENST00000358543 CARD11Q9BXL7 1154 aa34.55■■■■□ 3.12
ALKAL1-201ENST00000358543 NALCNQ8IZF0 1738 aa34.54■■■■□ 3.12
ALKAL1-201ENST00000358543 ARHGEF28Q8N1W1 1705 aaKnown RBP34.54■■■■□ 3.12
ALKAL1-201ENST00000358543 SAFB2Q14151 953 aaKnown RBP eCLIP34.49■■■■□ 3.11
ALKAL1-201ENST00000358543 SLAIN2Q9P270 581 aa34.47■■■■□ 3.11
ALKAL1-201ENST00000358543 EIF3AQ14152 1382 aaKnown RBP34.46■■■■□ 3.11
ALKAL1-201ENST00000358543 CENPJQ9HC77 1338 aaPredicted RBP34.45■■■■□ 3.11
ALKAL1-201ENST00000358543 CDC42BPGQ6DT37 1551 aa34.45■■■■□ 3.1
ALKAL1-201ENST00000358543 ADGRB2O60241 1585 aa34.4■■■■□ 3.1
ALKAL1-201ENST00000358543 MST1RQ04912 1400 aa34.4■■■■□ 3.1
ALKAL1-201ENST00000358543 MINK1Q8N4C8 1332 aaPredicted RBP34.4■■■■□ 3.1
ALKAL1-201ENST00000358543 PIP4K2BP78356 416 aa34.4■■■■□ 3.1
ALKAL1-201ENST00000358543 HIRIP3Q9BW71 556 aaPredicted RBP34.36■■■■□ 3.09
ALKAL1-201ENST00000358543 WASLO00401 505 aaPredicted RBP34.35■■■■□ 3.09
ALKAL1-201ENST00000358543 SCAF1Q9H7N4 1312 aaKnown RBP34.33■■■■□ 3.09
ALKAL1-201ENST00000358543 C1orf167Q5SNV9 1468 aa34.33■■■■□ 3.09
ALKAL1-201ENST00000358543 QRICH2Q9H0J4 1663 aa34.31■■■■□ 3.08
ALKAL1-201ENST00000358543 FMN2Q9NZ56 1722 aa34.31■■■■□ 3.08
ALKAL1-201ENST00000358543 SBNO2Q9Y2G9 1366 aa34.3■■■■□ 3.08
ALKAL1-201ENST00000358543 USP47Q96K76 1375 aa34.29■■■■□ 3.08
ALKAL1-201ENST00000358543 BRINP3Q76B58 766 aa34.27■■■■□ 3.08
ALKAL1-201ENST00000358543 ILDR1Q86SU0 546 aaPredicted RBP34.27■■■■□ 3.08
ALKAL1-201ENST00000358543 ROBO1Q9Y6N7 1651 aa34.27■■■■□ 3.08
ALKAL1-201ENST00000358543 ST20-MTHFSA0A0A6YYL1 179 aa34.26■■■■□ 3.08
ALKAL1-201ENST00000358543 CDK19Q9BWU1 502 aa34.26■■■■□ 3.08
ALKAL1-201ENST00000358543 ANKARQ7Z5J8 1434 aa34.26■■■■□ 3.07
ALKAL1-201ENST00000358543 NUTM2FA1L443 756 aa34.24■■■■□ 3.07
ALKAL1-201ENST00000358543 SLC24A1O60721 1099 aa34.24■■■■□ 3.07
ALKAL1-201ENST00000358543 ORAI2Q96SN7 254 aa34.23■■■■□ 3.07
ALKAL1-201ENST00000358543 EVC2Q86UK5 1308 aa34.23■■■■□ 3.07
ALKAL1-201ENST00000358543 TULP4Q9NRJ4 1543 aa34.22■■■■□ 3.07
ALKAL1-201ENST00000358543 ESCO1Q5FWF5 840 aa34.21■■■■□ 3.07
ALKAL1-201ENST00000358543 TESK2Q96S53 571 aa34.2■■■■□ 3.07
ALKAL1-201ENST00000358543 PRR36Q9H6K5 1346 aa34.18■■■■□ 3.06
ALKAL1-201ENST00000358543 USP32Q8NFA0 1604 aa34.17■■■■□ 3.06
ALKAL1-201ENST00000358543 NUDT16Q96DE0 195 aaKnown RBP34.17■■■■□ 3.06
ALKAL1-201ENST00000358543 EIF4G2P78344 907 aaKnown RBP eCLIP34.16■■■■□ 3.06
ALKAL1-201ENST00000358543 SRPK2P78362 688 aaKnown RBP34.16■■■■□ 3.06
ALKAL1-201ENST00000358543 RGPD8O14715 1765 aaPredicted RBP34.14■■■■□ 3.06
ALKAL1-201ENST00000358543 HSPA1LP34931 641 aa34.14■■■■□ 3.06
ALKAL1-201ENST00000358543 CABP2Q9NPB3 220 aa34.14■■■■□ 3.06
ALKAL1-201ENST00000358543 ATP7BP35670 1465 aa34.14■■■■□ 3.06
ALKAL1-201ENST00000358543 PHF8Q9UPP1 1060 aa34.13■■■■□ 3.05
ALKAL1-201ENST00000358543 CCDC61Q9Y6R9 512 aa34.13■■■■□ 3.05
ALKAL1-201ENST00000358543 AHDC1Q5TGY3 1603 aaPredicted RBP34.12■■■■□ 3.05
ALKAL1-201ENST00000358543 ZEB1P37275 1124 aaPredicted RBP34.1■■■■□ 3.05
ALKAL1-201ENST00000358543 PUS7Q96PZ0 661 aaKnown RBP34.1■■■■□ 3.05
ALKAL1-201ENST00000358543 KIF1AQ12756 1690 aa34.09■■■■□ 3.05
ALKAL1-201ENST00000358543 HSPA5P11021 654 aaKnown RBP34.08■■■■□ 3.05
ALKAL1-201ENST00000358543 NHSL1Q5SYE7 1610 aa34.08■■■■□ 3.05
ALKAL1-201ENST00000358543 NPHP3Q7Z494 1330 aa34.06■■■■□ 3.04
ALKAL1-201ENST00000358543 TMF1P82094 1093 aa34.06■■■■□ 3.04
ALKAL1-201ENST00000358543 ITSN1Q15811 1721 aa34.05■■■■□ 3.04
ALKAL1-201ENST00000358543 PLEKHG3A1L390 1219 aa34.05■■■■□ 3.04
ALKAL1-201ENST00000358543 FOXO3O43524 673 aa34.05■■■■□ 3.04
ALKAL1-201ENST00000358543 ATAD2Q6PL18 1390 aa34.04■■■■□ 3.04
ALKAL1-201ENST00000358543 PHLPP1O60346 1717 aa34.04■■■■□ 3.04
ALKAL1-201ENST00000358543 SOS2Q07890 1332 aaPredicted RBP34.04■■■■□ 3.04
ALKAL1-201ENST00000358543 PMFBP1Q8TBY8 1022 aa34.03■■■■□ 3.04
ALKAL1-201ENST00000358543 DDX17Q92841 729 aaKnown RBP34.03■■■■□ 3.04
ALKAL1-201ENST00000358543 TOPAZ1Q8N9V7 1692 aa34.03■■■■□ 3.04
ALKAL1-201ENST00000358543 PPIP5K1Q6PFW1 1433 aa34■■■■□ 3.03
ALKAL1-201ENST00000358543 CDCA8Q53HL2 280 aa33.99■■■■□ 3.03
ALKAL1-201ENST00000358543 COL16A1Q07092 1604 aaPredicted RBP33.99■■■■□ 3.03
ALKAL1-201ENST00000358543 NGDNQ8NEJ9 315 aaKnown RBP33.98■■■■□ 3.03
ALKAL1-201ENST00000358543 CABP1Q9NZU7 370 aa33.98■■■■□ 3.03
ALKAL1-201ENST00000358543 POLR3AO14802 1390 aaPredicted RBP33.98■■■■□ 3.03
ALKAL1-201ENST00000358543 DISP3Q9P2K9 1392 aa33.98■■■■□ 3.03
ALKAL1-201ENST00000358543 LRRC59Q96AG4 307 aaKnown RBP33.97■■■■□ 3.03
ALKAL1-201ENST00000358543 PSME1Q06323 249 aa33.96■■■■□ 3.03
ALKAL1-201ENST00000358543 PXDNQ92626 1479 aa33.95■■■■□ 3.03
ALKAL1-201ENST00000358543 KRT28Q7Z3Y7 464 aa33.95■■■■□ 3.03
ALKAL1-201ENST00000358543 ACEP12821 1306 aa33.94■■■■□ 3.02
ALKAL1-201ENST00000358543 XPCQ01831 940 aaPredicted RBP33.91■■■■□ 3.02
ALKAL1-201ENST00000358543 JCADQ9P266 1359 aa33.9■■■■□ 3.02
ALKAL1-201ENST00000358543 SBNO1A3KN83 1393 aa33.88■■■■□ 3.01
ALKAL1-201ENST00000358543 NINLQ9Y2I6 1382 aa33.88■■■■□ 3.01
ALKAL1-201ENST00000358543 ZNF692Q9BU19 519 aaPredicted RBP33.87■■■■□ 3.01
ALKAL1-201ENST00000358543 TMC1Q8TDI8 760 aa33.85■■■■□ 3.01
ALKAL1-201ENST00000358543 SPATA31A3Q5VYP0 1347 aa33.84■■■■□ 3.01
ALKAL1-201ENST00000358543 SLC12A5Q9H2X9 1139 aa33.84■■■■□ 3.01
ALKAL1-201ENST00000358543 BRD4O60885 1362 aaPredicted RBP33.84■■■■□ 3.01
ALKAL1-201ENST00000358543 CPSF1Q10570 1443 aaKnown RBP33.83■■■■□ 3.01
ALKAL1-201ENST00000358543 PNPLA6Q8IY17 1366 aa33.8■■■■□ 3
ALKAL1-201ENST00000358543 SHPRHQ149N8 1683 aa33.8■■■■□ 3
ALKAL1-201ENST00000358543 TNS3Q68CZ2 1445 aa33.79■■■■□ 3
ALKAL1-201ENST00000358543 TRPM3Q9HCF6 1732 aaPredicted RBP33.79■■■■□ 3
ALKAL1-201ENST00000358543 USP6P35125 1406 aa33.79■■■■□ 3
ALKAL1-201ENST00000358543 CD163L1Q9NR16 1453 aa33.78■■■■□ 3
ALKAL1-201ENST00000358543 C11orf95C9JLR9 678 aaPredicted RBP33.78■■■■□ 3
ALKAL1-201ENST00000358543 TERF2IPQ9NYB0 399 aa33.78■■■■□ 3
ALKAL1-201ENST00000358543 HDGFL2Q7Z4V5 671 aaPredicted RBP33.77■■■■□ 3
ALKAL1-201ENST00000358543 SPATA31A6Q5VVP1 1343 aa33.77■■■■□ 3
ALKAL1-201ENST00000358543 AKAP12Q02952 1782 aa33.75■■■□□ 2.99
ALKAL1-201ENST00000358543 ARHGEF10O15013 1369 aa33.75■■■□□ 2.99
ALKAL1-201ENST00000358543 SSH2Q76I76 1423 aa33.75■■■□□ 2.99
ALKAL1-201ENST00000358543 PAK3O75914 559 aaPredicted RBP33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms