RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
CNOT3-202ENST00000358389 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
CNOT3-202ENST00000358389 MORC1Q86VD1 984 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 NOL7Q9UMY1 257 aaKnown RBP14.13□□□□□ -0.15
CNOT3-202ENST00000358389 NLRP1Q9C000 1473 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 IGSF3O75054 1194 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 PRIM1P49642 420 aaKnown RBP14.13□□□□□ -0.15
CNOT3-202ENST00000358389 ZSCAN23Q3MJ62 389 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 CDK11BP21127 795 aaKnown RBP14.12□□□□□ -0.15
CNOT3-202ENST00000358389 KIAA2012Q0VF49 1180 aa14.12□□□□□ -0.15
CNOT3-202ENST00000358389 MLECQ14165 292 aa14.12□□□□□ -0.15
CNOT3-202ENST00000358389 CCDC39Q9UFE4 941 aa14.12□□□□□ -0.15
CNOT3-202ENST00000358389 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
CNOT3-202ENST00000358389 GAS2L2Q8NHY3 880 aa14.12□□□□□ -0.15
CNOT3-202ENST00000358389 ZKSCAN5Q9Y2L8 839 aa14.12□□□□□ -0.15
CNOT3-202ENST00000358389 SOX12O15370 315 aa14.12□□□□□ -0.15
CNOT3-202ENST00000358389 TERF1P54274 439 aa14.12□□□□□ -0.15
CNOT3-202ENST00000358389 SYCE3A1L190 88 aa14.11□□□□□ -0.15
CNOT3-202ENST00000358389 PRG4Q92954 1404 aaPredicted RBP14.11□□□□□ -0.15
CNOT3-202ENST00000358389 JARID2Q92833 1246 aaPredicted RBP14.11□□□□□ -0.15
CNOT3-202ENST00000358389 TSR2Q969E8 191 aaKnown RBP14.11□□□□□ -0.15
CNOT3-202ENST00000358389 CCDC94Q9BW85 323 aaPredicted RBP14.1□□□□□ -0.15
CNOT3-202ENST00000358389 CTTNBP2Q8WZ74 1663 aa14.1□□□□□ -0.15
CNOT3-202ENST00000358389 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
CNOT3-202ENST00000358389 CD2BP2O95400 341 aaKnown RBP14.1□□□□□ -0.15
CNOT3-202ENST00000358389 U2AF1L5P0DN76 240 aaPredicted RBP14.1□□□□□ -0.15
CNOT3-202ENST00000358389 U2AF1Q01081 240 aaKnown RBP eCLIP14.1□□□□□ -0.15
CNOT3-202ENST00000358389 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
CNOT3-202ENST00000358389 JPH4Q96JJ6 628 aa14.1□□□□□ -0.15
CNOT3-202ENST00000358389 SNX21Q969T3 373 aa14.09□□□□□ -0.15
CNOT3-202ENST00000358389 GGT6Q6P531 493 aa14.09□□□□□ -0.15
CNOT3-202ENST00000358389 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
CNOT3-202ENST00000358389 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
CNOT3-202ENST00000358389 NESP48681 1621 aa14.09□□□□□ -0.15
CNOT3-202ENST00000358389 RUNDC1Q96C34 613 aa14.08□□□□□ -0.16
CNOT3-202ENST00000358389 STK26Q9P289 416 aa14.08□□□□□ -0.16
CNOT3-202ENST00000358389 COL17A1Q9UMD9 1497 aaPredicted RBP14.08□□□□□ -0.16
CNOT3-202ENST00000358389 PRAG1Q86YV5 1406 aa14.08□□□□□ -0.16
CNOT3-202ENST00000358389 PPP4R3BQ5MIZ7 849 aa14.08□□□□□ -0.16
CNOT3-202ENST00000358389 ZNF771Q7L3S4 317 aaPredicted RBP14.08□□□□□ -0.16
CNOT3-202ENST00000358389 NGEFQ8N5V2 710 aa14.08□□□□□ -0.16
CNOT3-202ENST00000358389 NUCB2P80303 420 aa14.07□□□□□ -0.16
CNOT3-202ENST00000358389 ZNF830Q96NB3 372 aaPredicted RBP14.07□□□□□ -0.16
CNOT3-202ENST00000358389 ZNF500O60304 480 aaPredicted RBP14.07□□□□□ -0.16
CNOT3-202ENST00000358389 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
CNOT3-202ENST00000358389 CUL7Q14999 1698 aa14.06□□□□□ -0.16
CNOT3-202ENST00000358389 HS1BP3Q53T59 392 aa14.06□□□□□ -0.16
CNOT3-202ENST00000358389 SRPK2P78362 688 aaKnown RBP14.05□□□□□ -0.16
CNOT3-202ENST00000358389 DMTNQ08495 405 aa14.05□□□□□ -0.16
CNOT3-202ENST00000358389 APBB1O00213 710 aa14.05□□□□□ -0.16
CNOT3-202ENST00000358389 RBM25P49756 843 aaKnown RBP14.05□□□□□ -0.16
CNOT3-202ENST00000358389 EXOSC9Q06265 439 aaKnown RBP14.05□□□□□ -0.16
CNOT3-202ENST00000358389 NOL8Q76FK4 1167 aaKnown RBP14.05□□□□□ -0.16
CNOT3-202ENST00000358389 C1orf115Q9H7X2 142 aa14.05□□□□□ -0.16
CNOT3-202ENST00000358389 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-202ENST00000358389 KIF16BQ96L93 1317 aa14.05□□□□□ -0.16
CNOT3-202ENST00000358389 DNMT1P26358 1616 aaKnown RBP14.05□□□□□ -0.16
CNOT3-202ENST00000358389 CHAMP1Q96JM3 812 aa14.05□□□□□ -0.16
CNOT3-202ENST00000358389 BCL11BQ9C0K0 894 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-202ENST00000358389 CHD1LQ86WJ1 897 aa14.04□□□□□ -0.16
CNOT3-202ENST00000358389 ARHGEF12Q9NZN5 1544 aa14.04□□□□□ -0.16
CNOT3-202ENST00000358389 CHAF1AQ13111 956 aaPredicted RBP14.04□□□□□ -0.16
CNOT3-202ENST00000358389 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
CNOT3-202ENST00000358389 NOB1Q9ULX3 412 aaKnown RBP14.04□□□□□ -0.16
CNOT3-202ENST00000358389 TRIM27P14373 513 aa14.04□□□□□ -0.16
CNOT3-202ENST00000358389 TMEM57Q8N5G2 664 aa14.04□□□□□ -0.16
CNOT3-202ENST00000358389 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
CNOT3-202ENST00000358389 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
CNOT3-202ENST00000358389 CGNQ9P2M7 1197 aaKnown RBP14.03□□□□□ -0.16
CNOT3-202ENST00000358389 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
CNOT3-202ENST00000358389 SAMD9Q5K651 1589 aa14.03□□□□□ -0.16
CNOT3-202ENST00000358389 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
CNOT3-202ENST00000358389 ZNF445P59923 1031 aa14.03□□□□□ -0.16
CNOT3-202ENST00000358389 MAGI2Q86UL8 1455 aa14.02□□□□□ -0.16
CNOT3-202ENST00000358389 PKP1Q13835 747 aa14.02□□□□□ -0.17
CNOT3-202ENST00000358389 TBC1D9Q6ZT07 1266 aa14.02□□□□□ -0.17
CNOT3-202ENST00000358389 C17orf53Q8N3J3 647 aaPredicted RBP14.02□□□□□ -0.17
CNOT3-202ENST00000358389 VGLL3A8MV65 326 aa14.02□□□□□ -0.17
CNOT3-202ENST00000358389 KIF3AQ9Y496 699 aa14.02□□□□□ -0.17
CNOT3-202ENST00000358389 A0A0G2JS52 829 aa14.01□□□□□ -0.17
CNOT3-202ENST00000358389 IPO8O15397 1037 aaKnown RBP14.01□□□□□ -0.17
CNOT3-202ENST00000358389 MCM5P33992 734 aa14.01□□□□□ -0.17
CNOT3-202ENST00000358389 ATF7IPQ6VMQ6 1270 aa14.01□□□□□ -0.17
CNOT3-202ENST00000358389 SSH1Q8WYL5 1049 aa14.01□□□□□ -0.17
CNOT3-202ENST00000358389 HMGN5P82970 282 aaKnown RBP14.01□□□□□ -0.17
CNOT3-202ENST00000358389 CHMP4BQ9H444 224 aaKnown RBP14.01□□□□□ -0.17
CNOT3-202ENST00000358389 PDCL2Q8N4E4 241 aa14□□□□□ -0.17
CNOT3-202ENST00000358389 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14□□□□□ -0.17
CNOT3-202ENST00000358389 ZSCAN20P17040 1043 aaPredicted RBP14□□□□□ -0.17
CNOT3-202ENST00000358389 DDIT3P35638 169 aa14□□□□□ -0.17
CNOT3-202ENST00000358389 WDR63Q8IWG1 891 aa14□□□□□ -0.17
CNOT3-202ENST00000358389 LMBRD1Q9NUN5 540 aa14□□□□□ -0.17
CNOT3-202ENST00000358389 HDAC1Q13547 482 aaPredicted RBP14□□□□□ -0.17
CNOT3-202ENST00000358389 EIF2AK3Q9NZJ5 1116 aaKnown RBP14□□□□□ -0.17
CNOT3-202ENST00000358389 MTHFSP49914 203 aa14□□□□□ -0.17
CNOT3-202ENST00000358389 ST18O60284 1047 aa13.99□□□□□ -0.17
CNOT3-202ENST00000358389 TSPY26PQ9H489 355 aa13.99□□□□□ -0.17
CNOT3-202ENST00000358389 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
CNOT3-202ENST00000358389 TTC12Q9H892 705 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms