RNA–Protein interactions for RNA: ENST00000357227.8

CDK16-202, Transcript of cyclin dependent kinase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK16, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-202ENST00000357227 TAF3Q5VWG9 929 aa19.64■□□□□ 0.73
CDK16-202ENST00000357227 NCOA3Q9Y6Q9 1424 aa19.64■□□□□ 0.73
CDK16-202ENST00000357227 TCOF1Q13428 1488 aaKnown RBP19.64■□□□□ 0.73
CDK16-202ENST00000357227 CCDC39Q9UFE4 941 aa19.64■□□□□ 0.73
CDK16-202ENST00000357227 PMFBP1Q8TBY8 1022 aa19.63■□□□□ 0.73
CDK16-202ENST00000357227 MCTP1Q6DN14 999 aa19.63■□□□□ 0.73
CDK16-202ENST00000357227 RNF214Q8ND24 703 aa19.63■□□□□ 0.73
CDK16-202ENST00000357227 RBM27Q9P2N5 1060 aaKnown RBP19.63■□□□□ 0.73
CDK16-202ENST00000357227 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
CDK16-202ENST00000357227 E9PCH4 1651 aa19.62■□□□□ 0.73
CDK16-202ENST00000357227 KIAA2012Q0VF49 1180 aa19.62■□□□□ 0.73
CDK16-202ENST00000357227 RGL3Q3MIN7 710 aa19.62■□□□□ 0.73
CDK16-202ENST00000357227 PRG4Q92954 1404 aaPredicted RBP19.62■□□□□ 0.73
CDK16-202ENST00000357227 AEBP1Q8IUX7 1158 aa19.62■□□□□ 0.73
CDK16-202ENST00000357227 PDCL2Q8N4E4 241 aa19.62■□□□□ 0.73
CDK16-202ENST00000357227 BAG4O95429 457 aaKnown RBP19.61■□□□□ 0.73
CDK16-202ENST00000357227 C17orf53Q8N3J3 647 aaPredicted RBP19.61■□□□□ 0.73
CDK16-202ENST00000357227 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
CDK16-202ENST00000357227 CD2BP2O95400 341 aaKnown RBP19.61■□□□□ 0.73
CDK16-202ENST00000357227 ZNF445P59923 1031 aa19.61■□□□□ 0.73
CDK16-202ENST00000357227 MCM5P33992 734 aa19.6■□□□□ 0.73
CDK16-202ENST00000357227 PDE3AQ14432 1141 aa19.6■□□□□ 0.73
CDK16-202ENST00000357227 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
CDK16-202ENST00000357227 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
CDK16-202ENST00000357227 ARHGEF11O15085 1522 aa19.6■□□□□ 0.73
CDK16-202ENST00000357227 BCL2L12Q9HB09 334 aa19.6■□□□□ 0.73
CDK16-202ENST00000357227 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.59■□□□□ 0.733e-6■■■□□ 15.5
CDK16-202ENST00000357227 APAF1O14727 1248 aa19.59■□□□□ 0.73
CDK16-202ENST00000357227 KIF3AQ9Y496 699 aa19.58■□□□□ 0.73
CDK16-202ENST00000357227 BCL2L13Q9BXK5 485 aa19.58■□□□□ 0.72
CDK16-202ENST00000357227 IBTKQ9P2D0 1353 aaPredicted RBP19.58■□□□□ 0.72
CDK16-202ENST00000357227 NUP155O75694 1391 aa19.57■□□□□ 0.72
CDK16-202ENST00000357227 RALGAPBQ86X10 1494 aa19.57■□□□□ 0.72
CDK16-202ENST00000357227 RLBP1P12271 317 aa19.57■□□□□ 0.72
CDK16-202ENST00000357227 ZBTB9Q96C00 473 aa19.57■□□□□ 0.72
CDK16-202ENST00000357227 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
CDK16-202ENST00000357227 INSRP06213 1382 aa19.57■□□□□ 0.72
CDK16-202ENST00000357227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.722e-6■□□□□ 9.3
CDK16-202ENST00000357227 NBPF1Q3BBV0 1214 aa19.56■□□□□ 0.72
CDK16-202ENST00000357227 IRX3P78415 501 aaPredicted RBP19.55■□□□□ 0.72
CDK16-202ENST00000357227 GAS2L2Q8NHY3 880 aa19.55■□□□□ 0.72
CDK16-202ENST00000357227 SECISBP2LQ93073 1101 aaKnown RBP19.55■□□□□ 0.72
CDK16-202ENST00000357227 RBM42Q9BTD8 480 aaKnown RBP19.55■□□□□ 0.72
CDK16-202ENST00000357227 RWDD1Q9H446 243 aaPredicted RBP19.55■□□□□ 0.72
CDK16-202ENST00000357227 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
CDK16-202ENST00000357227 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
CDK16-202ENST00000357227 TRMT2AQ8IZ69 625 aaKnown RBP19.54■□□□□ 0.72
CDK16-202ENST00000357227 SNX21Q969T3 373 aa19.54■□□□□ 0.72
CDK16-202ENST00000357227 PRIMPOLQ96LW4 560 aa19.54■□□□□ 0.72
CDK16-202ENST00000357227 SYCE3A1L190 88 aa19.54■□□□□ 0.72
CDK16-202ENST00000357227 HNRNPMP52272 730 aaKnown RBP eCLIP19.53■□□□□ 0.729e-7■■■□□ 18.6
CDK16-202ENST00000357227 HMGN5P82970 282 aaKnown RBP19.53■□□□□ 0.72
CDK16-202ENST00000357227 ROCK1Q13464 1354 aa19.53■□□□□ 0.72
CDK16-202ENST00000357227 PBRM1Q86U86 1689 aa19.53■□□□□ 0.72
CDK16-202ENST00000357227 PLEKHD1A6NEE1 506 aa19.52■□□□□ 0.72
CDK16-202ENST00000357227 TRERF1Q96PN7 1200 aa19.51■□□□□ 0.71
CDK16-202ENST00000357227 CAMSAP2Q08AD1 1489 aa19.51■□□□□ 0.71
CDK16-202ENST00000357227 RBM25P49756 843 aaKnown RBP19.51■□□□□ 0.71
CDK16-202ENST00000357227 PRPF40AO75400 957 aaKnown RBP19.5■□□□□ 0.71
CDK16-202ENST00000357227 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
CDK16-202ENST00000357227 CHAMP1Q96JM3 812 aa19.5■□□□□ 0.71
CDK16-202ENST00000357227 K7ELQ4 463 aaPredicted RBP19.49■□□□□ 0.71
CDK16-202ENST00000357227 NOLC1Q14978 699 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDK16-202ENST00000357227 GTF2F1P35269 517 aaKnown RBP eCLIP19.49■□□□□ 0.711e-13■■■■■ 55.2
CDK16-202ENST00000357227 LMBRD1Q9NUN5 540 aa19.49■□□□□ 0.71
CDK16-202ENST00000357227 PZPP20742 1482 aa19.49■□□□□ 0.71
CDK16-202ENST00000357227 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
CDK16-202ENST00000357227 ANKRD30AQ9BXX3 1397 aa19.48■□□□□ 0.71
CDK16-202ENST00000357227 TRIM6-TRIM34B2RNG4 842 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 TRIM34Q9BYJ4 488 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 TTC12Q9H892 705 aaPredicted RBP19.47■□□□□ 0.71
CDK16-202ENST00000357227 PLB1Q6P1J6 1458 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.47■□□□□ 0.71
CDK16-202ENST00000357227 ERICH4A6NGS2 130 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 PKP1Q13835 747 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 TEX2Q8IWB9 1127 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 GPT2Q8TD30 523 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 ZMYM3Q14202 1370 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 KIAA1107Q9UPP5 1409 aa19.47■□□□□ 0.71
CDK16-202ENST00000357227 DNAJC2Q99543 621 aaKnown RBP19.47■□□□□ 0.71
CDK16-202ENST00000357227 SCAPERQ9BY12 1400 aa19.46■□□□□ 0.71
CDK16-202ENST00000357227 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
CDK16-202ENST00000357227 CHMP4CQ96CF2 233 aa19.46■□□□□ 0.71
CDK16-202ENST00000357227 DISP3Q9P2K9 1392 aa19.46■□□□□ 0.71
CDK16-202ENST00000357227 TMEM63CQ9P1W3 806 aa19.45■□□□□ 0.7
CDK16-202ENST00000357227 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
CDK16-202ENST00000357227 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
CDK16-202ENST00000357227 RGS22Q8NE09 1264 aa19.45■□□□□ 0.7
CDK16-202ENST00000357227 JPH4Q96JJ6 628 aa19.45■□□□□ 0.7
CDK16-202ENST00000357227 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
CDK16-202ENST00000357227 MAGI1Q96QZ7 1491 aaPredicted RBP19.45■□□□□ 0.7
CDK16-202ENST00000357227 LRSAM1Q6UWE0 723 aa19.45■□□□□ 0.7
CDK16-202ENST00000357227 GRIN2AQ12879 1464 aa19.44■□□□□ 0.7
CDK16-202ENST00000357227 KIF2CQ99661 725 aa19.44■□□□□ 0.7
CDK16-202ENST00000357227 NSFL1CQ9UNZ2 370 aaKnown RBP19.44■□□□□ 0.7
CDK16-202ENST00000357227 UHRF1BP1Q6BDS2 1440 aa19.44■□□□□ 0.7
CDK16-202ENST00000357227 PIBF1Q8WXW3 757 aa19.44■□□□□ 0.7
CDK16-202ENST00000357227 RIOK3O14730 519 aaKnown RBP19.43■□□□□ 0.7
CDK16-202ENST00000357227 FOXD4L5Q5VV16 416 aaPredicted RBP19.43■□□□□ 0.7
CDK16-202ENST00000357227 FOXD4L4Q8WXT5 416 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms