RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 APAF1O14727 1248 aa16.83■□□□□ 0.29
RNF220-202ENST00000355387 NPM2Q86SE8 214 aaKnown RBP16.83■□□□□ 0.29
RNF220-202ENST00000355387 ADGRB2O60241 1585 aa16.82■□□□□ 0.28
RNF220-202ENST00000355387 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
RNF220-202ENST00000355387 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
RNF220-202ENST00000355387 SIGLEC1Q9BZZ2 1709 aa16.81■□□□□ 0.28
RNF220-202ENST00000355387 NEXMIFQ5QGS0 1516 aa16.81■□□□□ 0.28
RNF220-202ENST00000355387 ANKRD26Q9UPS8 1709 aa16.81■□□□□ 0.28
RNF220-202ENST00000355387 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
RNF220-202ENST00000355387 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
RNF220-202ENST00000355387 CCDC27Q2M243 656 aa16.8■□□□□ 0.28
RNF220-202ENST00000355387 NEO1Q92859 1461 aa16.8■□□□□ 0.28
RNF220-202ENST00000355387 ZFYVE9O95405 1425 aa16.8■□□□□ 0.28
RNF220-202ENST00000355387 CCDC146Q8IYE0 955 aa16.79■□□□□ 0.28
RNF220-202ENST00000355387 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
RNF220-202ENST00000355387 WWC1Q8IX03 1113 aa16.78■□□□□ 0.28
RNF220-202ENST00000355387 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
RNF220-202ENST00000355387 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
RNF220-202ENST00000355387 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
RNF220-202ENST00000355387 TULP4Q9NRJ4 1543 aa16.77■□□□□ 0.28
RNF220-202ENST00000355387 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.27
RNF220-202ENST00000355387 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
RNF220-202ENST00000355387 CD109Q6YHK3 1445 aa16.76■□□□□ 0.27
RNF220-202ENST00000355387 DIP2CQ9Y2E4 1556 aa16.75■□□□□ 0.27
RNF220-202ENST00000355387 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
RNF220-202ENST00000355387 NEFMP07197 916 aa16.74■□□□□ 0.27
RNF220-202ENST00000355387 MED14O60244 1454 aa16.74■□□□□ 0.27
RNF220-202ENST00000355387 BCAR3O75815 825 aa16.73■□□□□ 0.27
RNF220-202ENST00000355387 RICTORQ6R327 1708 aa16.73■□□□□ 0.27
RNF220-202ENST00000355387 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
RNF220-202ENST00000355387 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
RNF220-202ENST00000355387 CFAP65Q6ZU64 1925 aaKnown RBP16.72■□□□□ 0.27
RNF220-202ENST00000355387 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
RNF220-202ENST00000355387 EVC2Q86UK5 1308 aa16.71■□□□□ 0.27
RNF220-202ENST00000355387 PRKCSHP14314 528 aaPredicted RBP16.71■□□□□ 0.27
RNF220-202ENST00000355387 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
RNF220-202ENST00000355387 SKAP1Q86WV1 359 aa16.7■□□□□ 0.26
RNF220-202ENST00000355387 VGFO15240 615 aaPredicted RBP16.7■□□□□ 0.26
RNF220-202ENST00000355387 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
RNF220-202ENST00000355387 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
RNF220-202ENST00000355387 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
RNF220-202ENST00000355387 RARSP54136 660 aaKnown RBP16.68■□□□□ 0.26
RNF220-202ENST00000355387 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
RNF220-202ENST00000355387 DAXXQ9UER7 740 aaPredicted RBP16.68■□□□□ 0.26
RNF220-202ENST00000355387 TRAK1Q9UPV9 953 aa16.68■□□□□ 0.26
RNF220-202ENST00000355387 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
RNF220-202ENST00000355387 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
RNF220-202ENST00000355387 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
RNF220-202ENST00000355387 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
RNF220-202ENST00000355387 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
RNF220-202ENST00000355387 MYH16Q9H6N6 1097 aa16.66■□□□□ 0.26
RNF220-202ENST00000355387 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
RNF220-202ENST00000355387 IGHDP01880 384 aa16.66■□□□□ 0.26
RNF220-202ENST00000355387 MYO5BQ9ULV0 1848 aa16.65■□□□□ 0.26
RNF220-202ENST00000355387 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
RNF220-202ENST00000355387 KIF20BQ96Q89 1820 aa16.65■□□□□ 0.26
RNF220-202ENST00000355387 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
RNF220-202ENST00000355387 MTHFSP49914 203 aa16.64■□□□□ 0.25
RNF220-202ENST00000355387 PTPRMP28827 1452 aa16.63■□□□□ 0.25
RNF220-202ENST00000355387 RGS3P49796 1198 aa16.63■□□□□ 0.25
RNF220-202ENST00000355387 NFKBIBQ15653 356 aa16.63■□□□□ 0.25
RNF220-202ENST00000355387 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
RNF220-202ENST00000355387 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
RNF220-202ENST00000355387 SLC52A1Q9NWF4 448 aa16.63■□□□□ 0.25
RNF220-202ENST00000355387 USP19O94966 1318 aa16.62■□□□□ 0.25
RNF220-202ENST00000355387 IL16Q14005 1332 aa16.62■□□□□ 0.25
RNF220-202ENST00000355387 COG6Q9Y2V7 657 aa16.61■□□□□ 0.25
RNF220-202ENST00000355387 GGT6Q6P531 493 aa16.61■□□□□ 0.25
RNF220-202ENST00000355387 PANK1Q8TE04 598 aa16.61■□□□□ 0.25
RNF220-202ENST00000355387 TMEM132EQ6IEE7 984 aa16.6■□□□□ 0.25
RNF220-202ENST00000355387 REREQ9P2R6 1566 aa16.59■□□□□ 0.25
RNF220-202ENST00000355387 GSE1Q14687 1217 aa16.59■□□□□ 0.25
RNF220-202ENST00000355387 DLC1Q96QB1 1528 aa16.59■□□□□ 0.25
RNF220-202ENST00000355387 A0A1W2PP64 1363 aa16.59■□□□□ 0.25
RNF220-202ENST00000355387 RWDD1Q9H446 243 aaPredicted RBP16.58■□□□□ 0.24
RNF220-202ENST00000355387 CD163L1Q9NR16 1453 aa16.58■□□□□ 0.24
RNF220-202ENST00000355387 BECN1Q14457 450 aa16.57■□□□□ 0.24
RNF220-202ENST00000355387 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
RNF220-202ENST00000355387 MVPQ14764 893 aaKnown RBP16.56■□□□□ 0.24
RNF220-202ENST00000355387 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
RNF220-202ENST00000355387 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
RNF220-202ENST00000355387 PNNQ9H307 717 aaKnown RBP16.55■□□□□ 0.24
RNF220-202ENST00000355387 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
RNF220-202ENST00000355387 YTHDC2Q9H6S0 1430 aaKnown RBP16.55■□□□□ 0.24
RNF220-202ENST00000355387 FRAT1Q92837 279 aaPredicted RBP16.54■□□□□ 0.24
RNF220-202ENST00000355387 RLBP1P12271 317 aa16.54■□□□□ 0.24
RNF220-202ENST00000355387 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
RNF220-202ENST00000355387 PCDHB15Q9Y5E8 787 aa16.54■□□□□ 0.24
RNF220-202ENST00000355387 SETD1AO15047 1707 aaKnown RBP16.54■□□□□ 0.24
RNF220-202ENST00000355387 ARHGEF40Q8TER5 1519 aa16.54■□□□□ 0.24
RNF220-202ENST00000355387 TERF2IPQ9NYB0 399 aa16.54■□□□□ 0.24
RNF220-202ENST00000355387 U2AF1L5P0DN76 240 aaPredicted RBP16.53■□□□□ 0.24
RNF220-202ENST00000355387 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
RNF220-202ENST00000355387 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
RNF220-202ENST00000355387 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
RNF220-202ENST00000355387 ATP7BP35670 1465 aa16.53■□□□□ 0.24
RNF220-202ENST00000355387 TNNT2P45379 298 aaPredicted RBP16.52■□□□□ 0.24
RNF220-202ENST00000355387 HDAC1Q13547 482 aaPredicted RBP16.52■□□□□ 0.24
RNF220-202ENST00000355387 UPF2Q9HAU5 1272 aaKnown RBP16.52■□□□□ 0.24
RNF220-202ENST00000355387 IDI1Q13907 227 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms