RNA–Protein interactions for RNA: ENST00000354480.2

RBM3-201, Transcript of RNA binding motif protein 3, humanhuman

TSL 2 BASIC

Gene RBM3, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-201ENST00000354480 ARHGAP23Q9P227 1491 aa17.1■□□□□ 0.33
RBM3-201ENST00000354480 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
RBM3-201ENST00000354480 SAFB2Q14151 953 aaKnown RBP eCLIP17.1■□□□□ 0.33
RBM3-201ENST00000354480 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
RBM3-201ENST00000354480 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
RBM3-201ENST00000354480 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
RBM3-201ENST00000354480 METP08581 1390 aa17.09■□□□□ 0.33
RBM3-201ENST00000354480 FAM135BQ49AJ0 1406 aa17.08■□□□□ 0.33
RBM3-201ENST00000354480 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.33
RBM3-201ENST00000354480 SLC12A5Q9H2X9 1139 aa17.08■□□□□ 0.33
RBM3-201ENST00000354480 LTKP29376 864 aa17.07■□□□□ 0.32
RBM3-201ENST00000354480 CABP2Q9NPB3 220 aa17.07■□□□□ 0.32
RBM3-201ENST00000354480 TECPR2O15040 1411 aa17.07■□□□□ 0.32
RBM3-201ENST00000354480 ANKRD36BQ8N2N9 1353 aa17.07■□□□□ 0.32
RBM3-201ENST00000354480 ZBED9Q6R2W3 1325 aa17.07■□□□□ 0.32
RBM3-201ENST00000354480 ADAMTSL3P82987 1691 aa17.06■□□□□ 0.32
RBM3-201ENST00000354480 RIMS1Q86UR5 1692 aaKnown RBP17.06■□□□□ 0.32
RBM3-201ENST00000354480 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
RBM3-201ENST00000354480 INSRP06213 1382 aa17.06■□□□□ 0.32
RBM3-201ENST00000354480 PPP2R1AP30153 589 aa17.05■□□□□ 0.32
RBM3-201ENST00000354480 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
RBM3-201ENST00000354480 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
RBM3-201ENST00000354480 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
RBM3-201ENST00000354480 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
RBM3-201ENST00000354480 TERF2IPQ9NYB0 399 aa17.04■□□□□ 0.32
RBM3-201ENST00000354480 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
RBM3-201ENST00000354480 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
RBM3-201ENST00000354480 MED14O60244 1454 aa17.03■□□□□ 0.32
RBM3-201ENST00000354480 CPS1P31327 1500 aa17.03■□□□□ 0.32
RBM3-201ENST00000354480 NSD2O96028 1365 aa17.02■□□□□ 0.32
RBM3-201ENST00000354480 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.32
RBM3-201ENST00000354480 USP32Q8NFA0 1604 aa17.01■□□□□ 0.31
RBM3-201ENST00000354480 DIP2AQ14689 1571 aa17.01■□□□□ 0.31
RBM3-201ENST00000354480 HDGFL2Q7Z4V5 671 aaPredicted RBP17.01■□□□□ 0.31
RBM3-201ENST00000354480 PLEKHH1Q9ULM0 1364 aa17.01■□□□□ 0.31
RBM3-201ENST00000354480 MORC1Q86VD1 984 aa17■□□□□ 0.31
RBM3-201ENST00000354480 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
RBM3-201ENST00000354480 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
RBM3-201ENST00000354480 SLC26A8Q96RN1 970 aa16.97■□□□□ 0.31
RBM3-201ENST00000354480 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
RBM3-201ENST00000354480 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
RBM3-201ENST00000354480 PIK3R4Q99570 1358 aa16.96■□□□□ 0.31
RBM3-201ENST00000354480 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
RBM3-201ENST00000354480 ROBO2Q9HCK4 1378 aa16.96■□□□□ 0.3
RBM3-201ENST00000354480 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
RBM3-201ENST00000354480 ATP7BP35670 1465 aa16.95■□□□□ 0.3
RBM3-201ENST00000354480 AMOTL2Q9Y2J4 779 aa16.95■□□□□ 0.3
RBM3-201ENST00000354480 BLMP54132 1417 aaPredicted RBP16.93■□□□□ 0.3
RBM3-201ENST00000354480 PTCH1Q13635 1447 aa16.93■□□□□ 0.3
RBM3-201ENST00000354480 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
RBM3-201ENST00000354480 NEFLP07196 543 aa16.92■□□□□ 0.3
RBM3-201ENST00000354480 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
RBM3-201ENST00000354480 CCDC61Q9Y6R9 512 aa16.92■□□□□ 0.3
RBM3-201ENST00000354480 POLR3AO14802 1390 aaPredicted RBP16.92■□□□□ 0.3
RBM3-201ENST00000354480 CD163L1Q9NR16 1453 aa16.92■□□□□ 0.3
RBM3-201ENST00000354480 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
RBM3-201ENST00000354480 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
RBM3-201ENST00000354480 CFAP53Q96M91 514 aa16.9■□□□□ 0.3
RBM3-201ENST00000354480 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
RBM3-201ENST00000354480 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
RBM3-201ENST00000354480 PPIP5K1Q6PFW1 1433 aa16.89■□□□□ 0.29
RBM3-201ENST00000354480 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
RBM3-201ENST00000354480 SMG6Q86US8 1419 aaKnown RBP16.88■□□□□ 0.29
RBM3-201ENST00000354480 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
RBM3-201ENST00000354480 FYB1O15117 783 aa16.87■□□□□ 0.29
RBM3-201ENST00000354480 EDC4Q6P2E9 1401 aaKnown RBP16.86■□□□□ 0.29
RBM3-201ENST00000354480 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
RBM3-201ENST00000354480 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
RBM3-201ENST00000354480 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
RBM3-201ENST00000354480 MTHFSP49914 203 aa16.84■□□□□ 0.29
RBM3-201ENST00000354480 GGNBP2Q9H3C7 697 aa16.84■□□□□ 0.29
RBM3-201ENST00000354480 XRN1Q8IZH2 1706 aaKnown RBP16.84■□□□□ 0.29
RBM3-201ENST00000354480 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.84■□□□□ 0.29
RBM3-201ENST00000354480 CDC42BPGQ6DT37 1551 aa16.84■□□□□ 0.29
RBM3-201ENST00000354480 NGEFQ8N5V2 710 aa16.84■□□□□ 0.29
RBM3-201ENST00000354480 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
RBM3-201ENST00000354480 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
RBM3-201ENST00000354480 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
RBM3-201ENST00000354480 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
RBM3-201ENST00000354480 KCNA6P17658 529 aa16.82■□□□□ 0.28
RBM3-201ENST00000354480 ANKRD26Q9UPS8 1709 aa16.81■□□□□ 0.28
RBM3-201ENST00000354480 FKBP8Q14318 412 aa16.8■□□□□ 0.28
RBM3-201ENST00000354480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.8■□□□□ 0.28
RBM3-201ENST00000354480 KIF20BQ96Q89 1820 aa16.78■□□□□ 0.28
RBM3-201ENST00000354480 ANKARQ7Z5J8 1434 aa16.78■□□□□ 0.28
RBM3-201ENST00000354480 SALL2Q9Y467 1007 aaPredicted RBP16.78■□□□□ 0.28
RBM3-201ENST00000354480 ERICH6BQ5W0A0 696 aa16.77■□□□□ 0.27
RBM3-201ENST00000354480 ACEP12821 1306 aa16.76■□□□□ 0.27
RBM3-201ENST00000354480 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
RBM3-201ENST00000354480 COG3Q96JB2 828 aa16.76■□□□□ 0.27
RBM3-201ENST00000354480 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
RBM3-201ENST00000354480 ITSN1Q15811 1721 aa16.76■□□□□ 0.27
RBM3-201ENST00000354480 MON2Q7Z3U7 1717 aa16.75■□□□□ 0.27
RBM3-201ENST00000354480 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
RBM3-201ENST00000354480 AKAP12Q02952 1782 aa16.75■□□□□ 0.27
RBM3-201ENST00000354480 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
RBM3-201ENST00000354480 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
RBM3-201ENST00000354480 NME9Q86XW9 330 aa16.73■□□□□ 0.27
RBM3-201ENST00000354480 CCDC146Q8IYE0 955 aa16.73■□□□□ 0.27
RBM3-201ENST00000354480 AATKQ6ZMQ8 1374 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms