RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 SIRT1Q96EB6 747 aa30.2■■■□□ 2.43
MRPL39-202ENST00000352957 SIN3AQ96ST3 1273 aa30.2■■■□□ 2.43
MRPL39-202ENST00000352957 DLC1Q96QB1 1528 aa30.2■■■□□ 2.42
MRPL39-202ENST00000352957 KIAA1210Q9ULL0 1709 aa30.16■■■□□ 2.42
MRPL39-202ENST00000352957 FMN2Q9NZ56 1722 aa30.16■■■□□ 2.42
MRPL39-202ENST00000352957 PRAM1Q96QH2 718 aa30.15■■■□□ 2.42
MRPL39-202ENST00000352957 JCADQ9P266 1359 aa30.14■■■□□ 2.41
MRPL39-202ENST00000352957 NEUROD1Q13562 356 aa30.13■■■□□ 2.41
MRPL39-202ENST00000352957 ORAI2Q96SN7 254 aa30.13■■■□□ 2.41
MRPL39-202ENST00000352957 TRAK1Q9UPV9 953 aa30.13■■■□□ 2.41
MRPL39-202ENST00000352957 SAFB2Q14151 953 aaKnown RBP eCLIP30.12■■■□□ 2.41
MRPL39-202ENST00000352957 DDX17Q92841 729 aaKnown RBP30.12■■■□□ 2.41
MRPL39-202ENST00000352957 SHPRHQ149N8 1683 aa30.11■■■□□ 2.41
MRPL39-202ENST00000352957 ARHGEF28Q8N1W1 1705 aaKnown RBP30.11■■■□□ 2.41
MRPL39-202ENST00000352957 L3MBTL2Q969R5 705 aa30.11■■■□□ 2.41
MRPL39-202ENST00000352957 POGKQ9P215 609 aa30.1■■■□□ 2.41
MRPL39-202ENST00000352957 NUTM2FA1L443 756 aa30.08■■■□□ 2.41
MRPL39-202ENST00000352957 RGPD8O14715 1765 aaPredicted RBP30.07■■■□□ 2.4
MRPL39-202ENST00000352957 ILDR2Q71H61 639 aa30.06■■■□□ 2.4
MRPL39-202ENST00000352957 ADGRB2O60241 1585 aa30.06■■■□□ 2.4
MRPL39-202ENST00000352957 PHF23Q9BUL5 403 aaPredicted RBP30.05■■■□□ 2.4
MRPL39-202ENST00000352957 ESCO1Q5FWF5 840 aa30.04■■■□□ 2.4
MRPL39-202ENST00000352957 NBPF1Q3BBV0 1214 aa30.02■■■□□ 2.4
MRPL39-202ENST00000352957 SPATA31A6Q5VVP1 1343 aa29.99■■■□□ 2.39
MRPL39-202ENST00000352957 KIF1AQ12756 1690 aa29.99■■■□□ 2.39
MRPL39-202ENST00000352957 LRRC59Q96AG4 307 aaKnown RBP29.99■■■□□ 2.39
MRPL39-202ENST00000352957 LRP6O75581 1613 aa29.99■■■□□ 2.39
MRPL39-202ENST00000352957 TRPM1Q7Z4N2 1603 aa29.99■■■□□ 2.39
MRPL39-202ENST00000352957 MINK1Q8N4C8 1332 aaPredicted RBP29.98■■■□□ 2.39
MRPL39-202ENST00000352957 USP32Q8NFA0 1604 aa29.98■■■□□ 2.39
MRPL39-202ENST00000352957 HIRIP3Q9BW71 556 aaPredicted RBP29.98■■■□□ 2.39
MRPL39-202ENST00000352957 SOS2Q07890 1332 aaPredicted RBP29.97■■■□□ 2.39
MRPL39-202ENST00000352957 NPHP3Q7Z494 1330 aa29.95■■■□□ 2.38
MRPL39-202ENST00000352957 PXDNQ92626 1479 aa29.94■■■□□ 2.38
MRPL39-202ENST00000352957 PNPLA6Q8IY17 1366 aa29.94■■■□□ 2.38
MRPL39-202ENST00000352957 FOXO3O43524 673 aa29.93■■■□□ 2.38
MRPL39-202ENST00000352957 RGS17Q9UGC6 210 aaPredicted RBP29.92■■■□□ 2.38
MRPL39-202ENST00000352957 ANKARQ7Z5J8 1434 aa29.91■■■□□ 2.38
MRPL39-202ENST00000352957 XPCQ01831 940 aaPredicted RBP29.9■■■□□ 2.38
MRPL39-202ENST00000352957 NUTM2BA6NNL0 878 aaPredicted RBP29.89■■■□□ 2.38
MRPL39-202ENST00000352957 NUTM2EB1AL46 878 aaPredicted RBP29.89■■■□□ 2.38
MRPL39-202ENST00000352957 NUTM2AQ8IVF1 878 aaPredicted RBP29.89■■■□□ 2.38
MRPL39-202ENST00000352957 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.38
MRPL39-202ENST00000352957 TULP4Q9NRJ4 1543 aa29.89■■■□□ 2.38
MRPL39-202ENST00000352957 TONSLQ96HA7 1378 aa29.89■■■□□ 2.37
MRPL39-202ENST00000352957 WASLO00401 505 aaPredicted RBP29.88■■■□□ 2.37
MRPL39-202ENST00000352957 PHF8Q9UPP1 1060 aa29.88■■■□□ 2.37
MRPL39-202ENST00000352957 MEX3CQ5U5Q3 659 aaKnown RBP29.86■■■□□ 2.37
MRPL39-202ENST00000352957 EIF3AQ14152 1382 aaKnown RBP29.86■■■□□ 2.37
MRPL39-202ENST00000352957 COL22A1Q8NFW1 1626 aaPredicted RBP29.85■■■□□ 2.37
MRPL39-202ENST00000352957 QRICH2Q9H0J4 1663 aa29.85■■■□□ 2.37
MRPL39-202ENST00000352957 NBPF8Q3BBV2 869 aa29.85■■■□□ 2.37
MRPL39-202ENST00000352957 PRR36Q9H6K5 1346 aa29.85■■■□□ 2.37
MRPL39-202ENST00000352957 ROCK2O75116 1388 aaKnown RBP29.83■■■□□ 2.37
MRPL39-202ENST00000352957 ITSN1Q15811 1721 aa29.82■■■□□ 2.36
MRPL39-202ENST00000352957 PMFBP1Q8TBY8 1022 aa29.81■■■□□ 2.36
MRPL39-202ENST00000352957 CENPJQ9HC77 1338 aaPredicted RBP29.8■■■□□ 2.36
MRPL39-202ENST00000352957 KRT28Q7Z3Y7 464 aa29.8■■■□□ 2.36
MRPL39-202ENST00000352957 ATP7BP35670 1465 aa29.79■■■□□ 2.36
MRPL39-202ENST00000352957 CDK19Q9BWU1 502 aa29.78■■■□□ 2.36
MRPL39-202ENST00000352957 POTEAQ6S8J7 498 aa29.77■■■□□ 2.36
MRPL39-202ENST00000352957 TOPAZ1Q8N9V7 1692 aa29.76■■■□□ 2.36
MRPL39-202ENST00000352957 SPATA31A3Q5VYP0 1347 aa29.75■■■□□ 2.35
MRPL39-202ENST00000352957 PSME1Q06323 249 aa29.74■■■□□ 2.35
MRPL39-202ENST00000352957 NUDT16Q96DE0 195 aaKnown RBP29.74■■■□□ 2.35
MRPL39-202ENST00000352957 GPRASP1Q5JY77 1395 aa29.74■■■□□ 2.35
MRPL39-202ENST00000352957 TRPM3Q9HCF6 1732 aaPredicted RBP29.74■■■□□ 2.35
MRPL39-202ENST00000352957 RALGAPBQ86X10 1494 aa29.73■■■□□ 2.35
MRPL39-202ENST00000352957 TNS3Q68CZ2 1445 aa29.72■■■□□ 2.35
MRPL39-202ENST00000352957 MARF1Q9Y4F3 1742 aaKnown RBP29.71■■■□□ 2.35
MRPL39-202ENST00000352957 ADAMTS2O95450 1211 aa29.71■■■□□ 2.35
MRPL39-202ENST00000352957 SBNO1A3KN83 1393 aa29.7■■■□□ 2.35
MRPL39-202ENST00000352957 SOCS7O14512 581 aa29.7■■■□□ 2.35
MRPL39-202ENST00000352957 C8orf37Q96NL8 207 aa29.7■■■□□ 2.35
MRPL39-202ENST00000352957 AFF2P51816 1311 aa29.69■■■□□ 2.34
MRPL39-202ENST00000352957 ZNF772Q68DY9 489 aaPredicted RBP29.68■■■□□ 2.34
MRPL39-202ENST00000352957 NGDNQ8NEJ9 315 aaKnown RBP29.67■■■□□ 2.34
MRPL39-202ENST00000352957 ALS2Q96Q42 1657 aa29.66■■■□□ 2.34
MRPL39-202ENST00000352957 SRPK2P78362 688 aaKnown RBP29.66■■■□□ 2.34
MRPL39-202ENST00000352957 CARD11Q9BXL7 1154 aa29.66■■■□□ 2.34
MRPL39-202ENST00000352957 ABCA3Q99758 1704 aa29.65■■■□□ 2.34
MRPL39-202ENST00000352957 CABP2Q9NPB3 220 aa29.64■■■□□ 2.34
MRPL39-202ENST00000352957 CCDC61Q9Y6R9 512 aa29.64■■■□□ 2.34
MRPL39-202ENST00000352957 LMOD2Q6P5Q4 547 aa29.63■■■□□ 2.33
MRPL39-202ENST00000352957 CLSPNQ9HAW4 1339 aa29.63■■■□□ 2.33
MRPL39-202ENST00000352957 NGLY1Q96IV0 654 aa29.62■■■□□ 2.33
MRPL39-202ENST00000352957 ARHGEF10O15013 1369 aa29.62■■■□□ 2.33
MRPL39-202ENST00000352957 PLEKHG5O94827 1062 aa29.59■■■□□ 2.33
MRPL39-202ENST00000352957 EVC2Q86UK5 1308 aa29.59■■■□□ 2.33
MRPL39-202ENST00000352957 POLR3AO14802 1390 aaPredicted RBP29.59■■■□□ 2.33
MRPL39-202ENST00000352957 PPIP5K1Q6PFW1 1433 aa29.59■■■□□ 2.33
MRPL39-202ENST00000352957 PLEKHG3A1L390 1219 aa29.58■■■□□ 2.33
MRPL39-202ENST00000352957 ACEP12821 1306 aa29.58■■■□□ 2.33
MRPL39-202ENST00000352957 CABLES1Q8TDN4 633 aa29.58■■■□□ 2.33
MRPL39-202ENST00000352957 PAK3O75914 559 aaPredicted RBP29.55■■■□□ 2.32
MRPL39-202ENST00000352957 CRYBG1Q9Y4K1 1723 aa29.54■■■□□ 2.32
MRPL39-202ENST00000352957 HAP1P54257 671 aaPredicted RBP29.54■■■□□ 2.32
MRPL39-202ENST00000352957 SBNO2Q9Y2G9 1366 aa29.53■■■□□ 2.32
MRPL39-202ENST00000352957 FNBP4Q8N3X1 1017 aaPredicted RBP29.53■■■□□ 2.32
MRPL39-202ENST00000352957 CCER1Q8TC90 406 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms