RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 POGKQ9P215 609 aa19.86■□□□□ 0.77
SEC13-202ENST00000350697 DCCP43146 1447 aa19.86■□□□□ 0.77
SEC13-202ENST00000350697 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.86■□□□□ 0.77
SEC13-202ENST00000350697 ARHGEF28Q8N1W1 1705 aaKnown RBP19.85■□□□□ 0.77
SEC13-202ENST00000350697 ATF3P18847 181 aa19.84■□□□□ 0.77
SEC13-202ENST00000350697 CADPS2Q86UW7 1296 aa19.84■□□□□ 0.77
SEC13-202ENST00000350697 CARD11Q9BXL7 1154 aa19.83■□□□□ 0.76
SEC13-202ENST00000350697 SAFB2Q14151 953 aaKnown RBP eCLIP19.82■□□□□ 0.76
SEC13-202ENST00000350697 CDC42BPGQ6DT37 1551 aa19.8■□□□□ 0.76
SEC13-202ENST00000350697 EIF3AQ14152 1382 aaKnown RBP19.79■□□□□ 0.76
SEC13-202ENST00000350697 PIP4K2BP78356 416 aa19.78■□□□□ 0.76
SEC13-202ENST00000350697 SLAIN2Q9P270 581 aa19.78■□□□□ 0.76
SEC13-202ENST00000350697 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
SEC13-202ENST00000350697 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
SEC13-202ENST00000350697 ADGRB2O60241 1585 aa19.77■□□□□ 0.75
SEC13-202ENST00000350697 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
SEC13-202ENST00000350697 MST1RQ04912 1400 aa19.76■□□□□ 0.75
SEC13-202ENST00000350697 HIRIP3Q9BW71 556 aaPredicted RBP19.74■□□□□ 0.75
SEC13-202ENST00000350697 QRICH2Q9H0J4 1663 aa19.73■□□□□ 0.75
SEC13-202ENST00000350697 FMN2Q9NZ56 1722 aa19.72■□□□□ 0.75
SEC13-202ENST00000350697 C1orf167Q5SNV9 1468 aa19.71■□□□□ 0.75
SEC13-202ENST00000350697 ROBO1Q9Y6N7 1651 aa19.71■□□□□ 0.75
SEC13-202ENST00000350697 WASLO00401 505 aaPredicted RBP19.7■□□□□ 0.74
SEC13-202ENST00000350697 USP47Q96K76 1375 aa19.69■□□□□ 0.74
SEC13-202ENST00000350697 NUTM2FA1L443 756 aa19.68■□□□□ 0.74
SEC13-202ENST00000350697 BRINP3Q76B58 766 aa19.68■□□□□ 0.74
SEC13-202ENST00000350697 SBNO2Q9Y2G9 1366 aa19.67■□□□□ 0.74
SEC13-202ENST00000350697 ANKARQ7Z5J8 1434 aa19.67■□□□□ 0.74
SEC13-202ENST00000350697 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
SEC13-202ENST00000350697 CDK19Q9BWU1 502 aa19.66■□□□□ 0.74
SEC13-202ENST00000350697 ST20-MTHFSA0A0A6YYL1 179 aa19.65■□□□□ 0.74
SEC13-202ENST00000350697 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
SEC13-202ENST00000350697 ORAI2Q96SN7 254 aa19.65■□□□□ 0.74
SEC13-202ENST00000350697 EVC2Q86UK5 1308 aa19.64■□□□□ 0.73
SEC13-202ENST00000350697 RGPD8O14715 1765 aaPredicted RBP19.63■□□□□ 0.73
SEC13-202ENST00000350697 USP32Q8NFA0 1604 aa19.63■□□□□ 0.73
SEC13-202ENST00000350697 SLC24A1O60721 1099 aa19.62■□□□□ 0.73
SEC13-202ENST00000350697 PRR36Q9H6K5 1346 aa19.62■□□□□ 0.73
SEC13-202ENST00000350697 HSPA1LP34931 641 aa19.61■□□□□ 0.73
SEC13-202ENST00000350697 SRPK2P78362 688 aaKnown RBP19.61■□□□□ 0.73
SEC13-202ENST00000350697 ATP7BP35670 1465 aa19.61■□□□□ 0.73
SEC13-202ENST00000350697 NUDT16Q96DE0 195 aaKnown RBP19.6■□□□□ 0.73
SEC13-202ENST00000350697 TESK2Q96S53 571 aa19.6■□□□□ 0.73
SEC13-202ENST00000350697 AHDC1Q5TGY3 1603 aaPredicted RBP19.6■□□□□ 0.73
SEC13-202ENST00000350697 EIF4G2P78344 907 aaKnown RBP eCLIP19.59■□□□□ 0.73
SEC13-202ENST00000350697 CABP2Q9NPB3 220 aa19.59■□□□□ 0.73
SEC13-202ENST00000350697 KIF1AQ12756 1690 aa19.59■□□□□ 0.73
SEC13-202ENST00000350697 NHSL1Q5SYE7 1610 aa19.59■□□□□ 0.73
SEC13-202ENST00000350697 PHF8Q9UPP1 1060 aa19.59■□□□□ 0.73
SEC13-202ENST00000350697 PHLPP1O60346 1717 aa19.58■□□□□ 0.73
SEC13-202ENST00000350697 ITSN1Q15811 1721 aa19.58■□□□□ 0.73
SEC13-202ENST00000350697 CCDC61Q9Y6R9 512 aa19.58■□□□□ 0.72
SEC13-202ENST00000350697 NPHP3Q7Z494 1330 aa19.56■□□□□ 0.72
SEC13-202ENST00000350697 TOPAZ1Q8N9V7 1692 aa19.55■□□□□ 0.72
SEC13-202ENST00000350697 FOXO3O43524 673 aa19.55■□□□□ 0.72
SEC13-202ENST00000350697 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
SEC13-202ENST00000350697 DDX17Q92841 729 aaKnown RBP19.55■□□□□ 0.72
SEC13-202ENST00000350697 TMF1P82094 1093 aa19.54■□□□□ 0.72
SEC13-202ENST00000350697 PMFBP1Q8TBY8 1022 aa19.54■□□□□ 0.72
SEC13-202ENST00000350697 ATAD2Q6PL18 1390 aa19.54■□□□□ 0.72
SEC13-202ENST00000350697 COL16A1Q07092 1604 aaPredicted RBP19.54■□□□□ 0.72
SEC13-202ENST00000350697 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
SEC13-202ENST00000350697 PUS7Q96PZ0 661 aaKnown RBP19.53■□□□□ 0.72
SEC13-202ENST00000350697 SOS2Q07890 1332 aaPredicted RBP19.53■□□□□ 0.72
SEC13-202ENST00000350697 PPIP5K1Q6PFW1 1433 aa19.53■□□□□ 0.72
SEC13-202ENST00000350697 PLEKHG3A1L390 1219 aa19.52■□□□□ 0.72
SEC13-202ENST00000350697 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
SEC13-202ENST00000350697 PXDNQ92626 1479 aa19.51■□□□□ 0.71
SEC13-202ENST00000350697 DISP3Q9P2K9 1392 aa19.51■□□□□ 0.71
SEC13-202ENST00000350697 PSME1Q06323 249 aa19.5■□□□□ 0.71
SEC13-202ENST00000350697 CDCA8Q53HL2 280 aa19.5■□□□□ 0.71
SEC13-202ENST00000350697 LRRC59Q96AG4 307 aaKnown RBP19.5■□□□□ 0.71
SEC13-202ENST00000350697 POLR3AO14802 1390 aaPredicted RBP19.49■□□□□ 0.71
SEC13-202ENST00000350697 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
SEC13-202ENST00000350697 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
SEC13-202ENST00000350697 CABP1Q9NZU7 370 aa19.49■□□□□ 0.71
SEC13-202ENST00000350697 ACEP12821 1306 aa19.48■□□□□ 0.71
SEC13-202ENST00000350697 JCADQ9P266 1359 aa19.47■□□□□ 0.71
SEC13-202ENST00000350697 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
SEC13-202ENST00000350697 NINLQ9Y2I6 1382 aa19.44■□□□□ 0.7
SEC13-202ENST00000350697 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
SEC13-202ENST00000350697 SHPRHQ149N8 1683 aa19.43■□□□□ 0.7
SEC13-202ENST00000350697 SPATA31A3Q5VYP0 1347 aa19.42■□□□□ 0.7
SEC13-202ENST00000350697 TRPM3Q9HCF6 1732 aaPredicted RBP19.42■□□□□ 0.7
SEC13-202ENST00000350697 ZNF692Q9BU19 519 aaPredicted RBP19.42■□□□□ 0.7
SEC13-202ENST00000350697 SLC12A5Q9H2X9 1139 aa19.42■□□□□ 0.7
SEC13-202ENST00000350697 PNPLA6Q8IY17 1366 aa19.41■□□□□ 0.7
SEC13-202ENST00000350697 TNS3Q68CZ2 1445 aa19.41■□□□□ 0.7
SEC13-202ENST00000350697 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
SEC13-202ENST00000350697 CPSF1Q10570 1443 aaKnown RBP19.41■□□□□ 0.7
SEC13-202ENST00000350697 USP6P35125 1406 aa19.4■□□□□ 0.7
SEC13-202ENST00000350697 AKAP12Q02952 1782 aa19.4■□□□□ 0.7
SEC13-202ENST00000350697 ARHGEF10O15013 1369 aa19.39■□□□□ 0.69
SEC13-202ENST00000350697 SPATA31A6Q5VVP1 1343 aa19.39■□□□□ 0.69
SEC13-202ENST00000350697 PAK3O75914 559 aaPredicted RBP19.39■□□□□ 0.69
SEC13-202ENST00000350697 HDGFL2Q7Z4V5 671 aaPredicted RBP19.39■□□□□ 0.69
SEC13-202ENST00000350697 TERF2IPQ9NYB0 399 aa19.39■□□□□ 0.69
SEC13-202ENST00000350697 CD163L1Q9NR16 1453 aa19.38■□□□□ 0.69
SEC13-202ENST00000350697 KTN1Q86UP2 1357 aaKnown RBP19.37■□□□□ 0.69
SEC13-202ENST00000350697 LMOD2Q6P5Q4 547 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms