RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CDC42BPGQ6DT37 1551 aa23.51■■□□□ 1.35
RAB5C-201ENST00000346213 NHSL1Q5SYE7 1610 aa23.51■■□□□ 1.35
RAB5C-201ENST00000346213 SIN3AQ96ST3 1273 aa23.51■■□□□ 1.35
RAB5C-201ENST00000346213 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
RAB5C-201ENST00000346213 LRP6O75581 1613 aa23.47■■□□□ 1.35
RAB5C-201ENST00000346213 RGS17Q9UGC6 210 aaPredicted RBP23.46■■□□□ 1.35
RAB5C-201ENST00000346213 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
RAB5C-201ENST00000346213 NUTM2FA1L443 756 aa23.43■■□□□ 1.34
RAB5C-201ENST00000346213 SAFB2Q14151 953 aaKnown RBP eCLIP23.42■■□□□ 1.34
RAB5C-201ENST00000346213 PRAM1Q96QH2 718 aa23.42■■□□□ 1.34
RAB5C-201ENST00000346213 JCADQ9P266 1359 aa23.42■■□□□ 1.34
RAB5C-201ENST00000346213 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
RAB5C-201ENST00000346213 TRAK1Q9UPV9 953 aa23.4■■□□□ 1.34
RAB5C-201ENST00000346213 SHPRHQ149N8 1683 aa23.4■■□□□ 1.34
RAB5C-201ENST00000346213 L3MBTL2Q969R5 705 aa23.39■■□□□ 1.34
RAB5C-201ENST00000346213 SIRT1Q96EB6 747 aa23.39■■□□□ 1.34
RAB5C-201ENST00000346213 NBPF1Q3BBV0 1214 aa23.38■■□□□ 1.33
RAB5C-201ENST00000346213 ARHGEF28Q8N1W1 1705 aaKnown RBP23.37■■□□□ 1.33
RAB5C-201ENST00000346213 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
RAB5C-201ENST00000346213 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
RAB5C-201ENST00000346213 PXDNQ92626 1479 aa23.35■■□□□ 1.33
RAB5C-201ENST00000346213 NEUROD1Q13562 356 aa23.34■■□□□ 1.33
RAB5C-201ENST00000346213 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
RAB5C-201ENST00000346213 PNPLA6Q8IY17 1366 aa23.33■■□□□ 1.33
RAB5C-201ENST00000346213 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.33
RAB5C-201ENST00000346213 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
RAB5C-201ENST00000346213 KIAA1210Q9ULL0 1709 aa23.32■■□□□ 1.32
RAB5C-201ENST00000346213 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
RAB5C-201ENST00000346213 STAC3Q96MF2 364 aa23.32■■□□□ 1.32
RAB5C-201ENST00000346213 RGPD8O14715 1765 aaPredicted RBP23.31■■□□□ 1.32
RAB5C-201ENST00000346213 MINK1Q8N4C8 1332 aaPredicted RBP23.3■■□□□ 1.32
RAB5C-201ENST00000346213 PRR36Q9H6K5 1346 aa23.3■■□□□ 1.32
RAB5C-201ENST00000346213 POTEAQ6S8J7 498 aa23.28■■□□□ 1.32
RAB5C-201ENST00000346213 FOXO3O43524 673 aa23.28■■□□□ 1.32
RAB5C-201ENST00000346213 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
RAB5C-201ENST00000346213 POGKQ9P215 609 aa23.28■■□□□ 1.32
RAB5C-201ENST00000346213 NBPF8Q3BBV2 869 aa23.27■■□□□ 1.32
RAB5C-201ENST00000346213 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
RAB5C-201ENST00000346213 SPATA31A6Q5VVP1 1343 aa23.26■■□□□ 1.31
RAB5C-201ENST00000346213 NUTM2BA6NNL0 878 aaPredicted RBP23.24■■□□□ 1.31
RAB5C-201ENST00000346213 NUTM2EB1AL46 878 aaPredicted RBP23.24■■□□□ 1.31
RAB5C-201ENST00000346213 NUTM2AQ8IVF1 878 aaPredicted RBP23.24■■□□□ 1.31
RAB5C-201ENST00000346213 LRRC59Q96AG4 307 aaKnown RBP23.24■■□□□ 1.31
RAB5C-201ENST00000346213 KIF1AQ12756 1690 aa23.22■■□□□ 1.31
RAB5C-201ENST00000346213 TULP4Q9NRJ4 1543 aa23.22■■□□□ 1.31
RAB5C-201ENST00000346213 COL22A1Q8NFW1 1626 aaPredicted RBP23.21■■□□□ 1.31
RAB5C-201ENST00000346213 ATP7BP35670 1465 aa23.21■■□□□ 1.31
RAB5C-201ENST00000346213 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.31
RAB5C-201ENST00000346213 ANKARQ7Z5J8 1434 aa23.2■■□□□ 1.31
RAB5C-201ENST00000346213 WASLO00401 505 aaPredicted RBP23.19■■□□□ 1.3
RAB5C-201ENST00000346213 PHF8Q9UPP1 1060 aa23.19■■□□□ 1.3
RAB5C-201ENST00000346213 PMFBP1Q8TBY8 1022 aa23.18■■□□□ 1.3
RAB5C-201ENST00000346213 SOCS7O14512 581 aa23.16■■□□□ 1.3
RAB5C-201ENST00000346213 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
RAB5C-201ENST00000346213 TRPM3Q9HCF6 1732 aaPredicted RBP23.14■■□□□ 1.29
RAB5C-201ENST00000346213 SPATA31A3Q5VYP0 1347 aa23.14■■□□□ 1.29
RAB5C-201ENST00000346213 TOPAZ1Q8N9V7 1692 aa23.14■■□□□ 1.29
RAB5C-201ENST00000346213 KRT28Q7Z3Y7 464 aa23.13■■□□□ 1.29
RAB5C-201ENST00000346213 QRICH2Q9H0J4 1663 aa23.13■■□□□ 1.29
RAB5C-201ENST00000346213 ADAMTS2O95450 1211 aa23.12■■□□□ 1.29
RAB5C-201ENST00000346213 MEX3CQ5U5Q3 659 aaKnown RBP23.12■■□□□ 1.29
RAB5C-201ENST00000346213 GPRASP1Q5JY77 1395 aa23.12■■□□□ 1.29
RAB5C-201ENST00000346213 CDK19Q9BWU1 502 aa23.11■■□□□ 1.29
RAB5C-201ENST00000346213 TNS3Q68CZ2 1445 aa23.11■■□□□ 1.29
RAB5C-201ENST00000346213 AFF2P51816 1311 aa23.1■■□□□ 1.29
RAB5C-201ENST00000346213 CENPJQ9HC77 1338 aaPredicted RBP23.1■■□□□ 1.29
RAB5C-201ENST00000346213 ROCK2O75116 1388 aaKnown RBP23.1■■□□□ 1.29
RAB5C-201ENST00000346213 NUDT16Q96DE0 195 aaKnown RBP23.09■■□□□ 1.29
RAB5C-201ENST00000346213 C8orf37Q96NL8 207 aa23.09■■□□□ 1.29
RAB5C-201ENST00000346213 RALGAPBQ86X10 1494 aa23.08■■□□□ 1.28
RAB5C-201ENST00000346213 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
RAB5C-201ENST00000346213 ABCA3Q99758 1704 aa23.07■■□□□ 1.28
RAB5C-201ENST00000346213 CABLES1Q8TDN4 633 aa23.06■■□□□ 1.28
RAB5C-201ENST00000346213 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
RAB5C-201ENST00000346213 SBNO1A3KN83 1393 aa23.05■■□□□ 1.28
RAB5C-201ENST00000346213 CABP2Q9NPB3 220 aa23.04■■□□□ 1.28
RAB5C-201ENST00000346213 EIF3AQ14152 1382 aaKnown RBP23.04■■□□□ 1.28
RAB5C-201ENST00000346213 PLEKHG5O94827 1062 aa23.03■■□□□ 1.28
RAB5C-201ENST00000346213 ITSN1Q15811 1721 aa23.02■■□□□ 1.28
RAB5C-201ENST00000346213 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
RAB5C-201ENST00000346213 MARF1Q9Y4F3 1742 aaKnown RBP23.01■■□□□ 1.27
RAB5C-201ENST00000346213 PSME1Q06323 249 aa23.01■■□□□ 1.27
RAB5C-201ENST00000346213 POLR3AO14802 1390 aaPredicted RBP23.01■■□□□ 1.27
RAB5C-201ENST00000346213 BCL9LQ86UU0 1499 aa23■■□□□ 1.27
RAB5C-201ENST00000346213 ZNF772Q68DY9 489 aaPredicted RBP22.99■■□□□ 1.27
RAB5C-201ENST00000346213 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
RAB5C-201ENST00000346213 ACEP12821 1306 aa22.98■■□□□ 1.27
RAB5C-201ENST00000346213 FNBP4Q8N3X1 1017 aaPredicted RBP22.98■■□□□ 1.27
RAB5C-201ENST00000346213 NGLY1Q96IV0 654 aa22.97■■□□□ 1.27
RAB5C-201ENST00000346213 PPIP5K1Q6PFW1 1433 aa22.97■■□□□ 1.27
RAB5C-201ENST00000346213 NGDNQ8NEJ9 315 aaKnown RBP22.97■■□□□ 1.27
RAB5C-201ENST00000346213 PLEKHG3A1L390 1219 aa22.96■■□□□ 1.27
RAB5C-201ENST00000346213 LMOD2Q6P5Q4 547 aa22.96■■□□□ 1.27
RAB5C-201ENST00000346213 CARD11Q9BXL7 1154 aa22.96■■□□□ 1.27
RAB5C-201ENST00000346213 CCDC61Q9Y6R9 512 aa22.96■■□□□ 1.27
RAB5C-201ENST00000346213 SLIT2O94813 1529 aa22.96■■□□□ 1.27
RAB5C-201ENST00000346213 RGS12O14924 1447 aa22.95■■□□□ 1.26
RAB5C-201ENST00000346213 SRPK2P78362 688 aaKnown RBP22.95■■□□□ 1.26
RAB5C-201ENST00000346213 ATRNO75882 1429 aa22.95■■□□□ 1.26
RAB5C-201ENST00000346213 ARHGEF10O15013 1369 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms