RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 WAPLQ7Z5K2 1190 aa17.5■□□□□ 0.39
CSNK1G3-201ENST00000345990 SMG6Q86US8 1419 aaKnown RBP17.49■□□□□ 0.39
CSNK1G3-201ENST00000345990 TET3O43151 1660 aa17.49■□□□□ 0.39
CSNK1G3-201ENST00000345990 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
CSNK1G3-201ENST00000345990 KCNH5Q8NCM2 988 aa17.49■□□□□ 0.39
CSNK1G3-201ENST00000345990 TSPOAP1O95153 1857 aa17.49■□□□□ 0.39
CSNK1G3-201ENST00000345990 IQGAP3Q86VI3 1631 aa17.48■□□□□ 0.39
CSNK1G3-201ENST00000345990 BCL11AQ9H165 835 aa17.48■□□□□ 0.39
CSNK1G3-201ENST00000345990 PMFBP1Q8TBY8 1022 aa17.48■□□□□ 0.39
CSNK1G3-201ENST00000345990 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
CSNK1G3-201ENST00000345990 UNC13BO14795 1591 aa17.47■□□□□ 0.39
CSNK1G3-201ENST00000345990 APAF1O14727 1248 aa17.47■□□□□ 0.39
CSNK1G3-201ENST00000345990 SIRT1Q96EB6 747 aa17.47■□□□□ 0.39
CSNK1G3-201ENST00000345990 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
CSNK1G3-201ENST00000345990 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
CSNK1G3-201ENST00000345990 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.39
CSNK1G3-201ENST00000345990 PHF8Q9UPP1 1060 aa17.45■□□□□ 0.38
CSNK1G3-201ENST00000345990 CCDC9Q9Y3X0 531 aaKnown RBP17.45■□□□□ 0.38
CSNK1G3-201ENST00000345990 RAPGEF4Q8WZA2 1011 aa17.45■□□□□ 0.38
CSNK1G3-201ENST00000345990 LRRIQ1Q96JM4 1722 aa17.45■□□□□ 0.38
CSNK1G3-201ENST00000345990 ABCC3O15438 1527 aa17.45■□□□□ 0.38
CSNK1G3-201ENST00000345990 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
CSNK1G3-201ENST00000345990 YTHDC2Q9H6S0 1430 aaKnown RBP17.44■□□□□ 0.38
CSNK1G3-201ENST00000345990 TEFQ10587 303 aa17.44■□□□□ 0.38
CSNK1G3-201ENST00000345990 KDM6BO15054 1643 aa17.44■□□□□ 0.38
CSNK1G3-201ENST00000345990 GNAI1P63096 354 aa17.44■□□□□ 0.38
CSNK1G3-201ENST00000345990 MYOM2P54296 1465 aa17.44■□□□□ 0.38
CSNK1G3-201ENST00000345990 RIPK4P57078 832 aa17.43■□□□□ 0.38
CSNK1G3-201ENST00000345990 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
CSNK1G3-201ENST00000345990 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
CSNK1G3-201ENST00000345990 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
CSNK1G3-201ENST00000345990 ANKRD36BQ8N2N9 1353 aa17.42■□□□□ 0.38
CSNK1G3-201ENST00000345990 TTC21AQ8NDW8 1320 aa17.42■□□□□ 0.38
CSNK1G3-201ENST00000345990 ERVK-7P63135 1459 aa17.41■□□□□ 0.38
CSNK1G3-201ENST00000345990 ARXQ96QS3 562 aa17.41■□□□□ 0.38
CSNK1G3-201ENST00000345990 DISP3Q9P2K9 1392 aa17.41■□□□□ 0.38
CSNK1G3-201ENST00000345990 C11orf95C9JLR9 678 aaPredicted RBP17.41■□□□□ 0.38
CSNK1G3-201ENST00000345990 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
CSNK1G3-201ENST00000345990 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
CSNK1G3-201ENST00000345990 LMTK2Q8IWU2 1503 aa17.4■□□□□ 0.38
CSNK1G3-201ENST00000345990 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
CSNK1G3-201ENST00000345990 MSH6P52701 1360 aa17.39■□□□□ 0.37
CSNK1G3-201ENST00000345990 TESK2Q96S53 571 aa17.39■□□□□ 0.37
CSNK1G3-201ENST00000345990 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 FCHSD2O94868 740 aa17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 INO80Q9ULG1 1556 aaPredicted RBP17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 SBNO2Q9Y2G9 1366 aa17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
CSNK1G3-201ENST00000345990 AGLP35573 1532 aa17.37■□□□□ 0.37
CSNK1G3-201ENST00000345990 RWDD1Q9H446 243 aaPredicted RBP17.37■□□□□ 0.37
CSNK1G3-201ENST00000345990 AAMPQ13685 434 aa17.36■□□□□ 0.37
CSNK1G3-201ENST00000345990 NLRP2Q9NX02 1062 aa17.36■□□□□ 0.37
CSNK1G3-201ENST00000345990 COL17A1Q9UMD9 1497 aaPredicted RBP17.35■□□□□ 0.37
CSNK1G3-201ENST00000345990 ZFYVE9O95405 1425 aa17.35■□□□□ 0.37
CSNK1G3-201ENST00000345990 TCP11L2Q8N4U5 519 aa17.35■□□□□ 0.37
CSNK1G3-201ENST00000345990 DIP2BQ9P265 1576 aa17.35■□□□□ 0.37
CSNK1G3-201ENST00000345990 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
CSNK1G3-201ENST00000345990 KCNA6P17658 529 aa17.34■□□□□ 0.37
CSNK1G3-201ENST00000345990 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
CSNK1G3-201ENST00000345990 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
CSNK1G3-201ENST00000345990 C19orf44Q9H6X5 657 aa17.34■□□□□ 0.37
CSNK1G3-201ENST00000345990 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
CSNK1G3-201ENST00000345990 KIF1BO60333 1816 aa17.34■□□□□ 0.37
CSNK1G3-201ENST00000345990 KDM5CP41229 1560 aa17.34■□□□□ 0.37
CSNK1G3-201ENST00000345990 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.37
CSNK1G3-201ENST00000345990 WDR63Q8IWG1 891 aa17.33■□□□□ 0.37
CSNK1G3-201ENST00000345990 HMMRO75330 724 aa17.33■□□□□ 0.37
CSNK1G3-201ENST00000345990 ZKSCAN2Q63HK3 967 aa17.33■□□□□ 0.36
CSNK1G3-201ENST00000345990 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
CSNK1G3-201ENST00000345990 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
CSNK1G3-201ENST00000345990 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
CSNK1G3-201ENST00000345990 API5Q9BZZ5 524 aaKnown RBP17.32■□□□□ 0.36
CSNK1G3-201ENST00000345990 HMOX1P09601 288 aa17.32■□□□□ 0.36
CSNK1G3-201ENST00000345990 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
CSNK1G3-201ENST00000345990 KIF16BQ96L93 1317 aa17.31■□□□□ 0.36
CSNK1G3-201ENST00000345990 OS9Q13438 667 aaPredicted RBP17.31■□□□□ 0.36
CSNK1G3-201ENST00000345990 ITPRIPQ8IWB1 547 aa17.31■□□□□ 0.36
CSNK1G3-201ENST00000345990 ACEP12821 1306 aa17.31■□□□□ 0.36
CSNK1G3-201ENST00000345990 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
CSNK1G3-201ENST00000345990 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
CSNK1G3-201ENST00000345990 MEX3CQ5U5Q3 659 aaKnown RBP17.3■□□□□ 0.36
CSNK1G3-201ENST00000345990 NPHP1O15259 732 aa17.3■□□□□ 0.36
CSNK1G3-201ENST00000345990 NPHP3Q7Z494 1330 aa17.3■□□□□ 0.36
CSNK1G3-201ENST00000345990 PIK3R4Q99570 1358 aa17.29■□□□□ 0.36
CSNK1G3-201ENST00000345990 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
CSNK1G3-201ENST00000345990 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
CSNK1G3-201ENST00000345990 PLA2R1Q13018 1463 aa17.29■□□□□ 0.36
CSNK1G3-201ENST00000345990 PRDM11Q9NQV5 511 aa17.29■□□□□ 0.36
CSNK1G3-201ENST00000345990 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
CSNK1G3-201ENST00000345990 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
CSNK1G3-201ENST00000345990 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
CSNK1G3-201ENST00000345990 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
CSNK1G3-201ENST00000345990 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
CSNK1G3-201ENST00000345990 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
CSNK1G3-201ENST00000345990 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.35
CSNK1G3-201ENST00000345990 NME9Q86XW9 330 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms