RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 DCAF11Q8TEB1 546 aa28.94■■■□□ 2.22
CLTA-202ENST00000345519 BRINP3Q76B58 766 aa28.92■■■□□ 2.22
CLTA-202ENST00000345519 RGPD8O14715 1765 aaPredicted RBP28.92■■■□□ 2.22
CLTA-202ENST00000345519 PLEKHH1Q9ULM0 1364 aa28.91■■■□□ 2.22
CLTA-202ENST00000345519 TRPM1Q7Z4N2 1603 aa28.88■■■□□ 2.21
CLTA-202ENST00000345519 KIF1AQ12756 1690 aa28.88■■■□□ 2.21
CLTA-202ENST00000345519 USP32Q8NFA0 1604 aa28.85■■■□□ 2.21
CLTA-202ENST00000345519 DISP3Q9P2K9 1392 aa28.85■■■□□ 2.21
CLTA-202ENST00000345519 WAPLQ7Z5K2 1190 aa28.84■■■□□ 2.21
CLTA-202ENST00000345519 STK26Q9P289 416 aa28.84■■■□□ 2.21
CLTA-202ENST00000345519 KDM2AQ9Y2K7 1162 aa28.83■■■□□ 2.21
CLTA-202ENST00000345519 JCADQ9P266 1359 aa28.83■■■□□ 2.21
CLTA-202ENST00000345519 COL22A1Q8NFW1 1626 aaPredicted RBP28.79■■■□□ 2.2
CLTA-202ENST00000345519 ITSN1Q15811 1721 aa28.76■■■□□ 2.19
CLTA-202ENST00000345519 PXDNQ92626 1479 aa28.75■■■□□ 2.19
CLTA-202ENST00000345519 SIN3AQ96ST3 1273 aa28.75■■■□□ 2.19
CLTA-202ENST00000345519 PRAM1Q96QH2 718 aa28.74■■■□□ 2.19
CLTA-202ENST00000345519 L3MBTL2Q969R5 705 aa28.73■■■□□ 2.19
CLTA-202ENST00000345519 LRP6O75581 1613 aa28.72■■■□□ 2.19
CLTA-202ENST00000345519 ANKARQ7Z5J8 1434 aa28.72■■■□□ 2.19
CLTA-202ENST00000345519 SOS2Q07890 1332 aaPredicted RBP28.71■■■□□ 2.19
CLTA-202ENST00000345519 TOPAZ1Q8N9V7 1692 aa28.71■■■□□ 2.19
CLTA-202ENST00000345519 QRICH2Q9H0J4 1663 aa28.71■■■□□ 2.19
CLTA-202ENST00000345519 TULP4Q9NRJ4 1543 aa28.71■■■□□ 2.19
CLTA-202ENST00000345519 ORAI2Q96SN7 254 aa28.71■■■□□ 2.19
CLTA-202ENST00000345519 SPATA31A6Q5VVP1 1343 aa28.7■■■□□ 2.19
CLTA-202ENST00000345519 TRAK1Q9UPV9 953 aa28.68■■■□□ 2.18
CLTA-202ENST00000345519 MARF1Q9Y4F3 1742 aaKnown RBP28.68■■■□□ 2.18
CLTA-202ENST00000345519 PNPLA6Q8IY17 1366 aa28.65■■■□□ 2.18
CLTA-202ENST00000345519 TRPM3Q9HCF6 1732 aaPredicted RBP28.65■■■□□ 2.18
CLTA-202ENST00000345519 NBPF1Q3BBV0 1214 aa28.63■■■□□ 2.17
CLTA-202ENST00000345519 DDX17Q92841 729 aaKnown RBP28.63■■■□□ 2.17
CLTA-202ENST00000345519 LRRC59Q96AG4 307 aaKnown RBP28.63■■■□□ 2.17
CLTA-202ENST00000345519 POGKQ9P215 609 aa28.63■■■□□ 2.17
CLTA-202ENST00000345519 NPHP3Q7Z494 1330 aa28.63■■■□□ 2.17
CLTA-202ENST00000345519 EIF3AQ14152 1382 aaKnown RBP28.62■■■□□ 2.17
CLTA-202ENST00000345519 ATP7BP35670 1465 aa28.61■■■□□ 2.17
CLTA-202ENST00000345519 ILDR2Q71H61 639 aa28.61■■■□□ 2.17
CLTA-202ENST00000345519 GPRASP1Q5JY77 1395 aa28.61■■■□□ 2.17
CLTA-202ENST00000345519 ABCA3Q99758 1704 aa28.6■■■□□ 2.17
CLTA-202ENST00000345519 ESCO1Q5FWF5 840 aa28.6■■■□□ 2.17
CLTA-202ENST00000345519 NEUROD1Q13562 356 aa28.59■■■□□ 2.17
CLTA-202ENST00000345519 ALS2Q96Q42 1657 aa28.58■■■□□ 2.17
CLTA-202ENST00000345519 SAFB2Q14151 953 aaKnown RBP eCLIP28.58■■■□□ 2.17
CLTA-202ENST00000345519 RGS17Q9UGC6 210 aaPredicted RBP28.58■■■□□ 2.17
CLTA-202ENST00000345519 RALGAPBQ86X10 1494 aa28.57■■■□□ 2.16
CLTA-202ENST00000345519 MINK1Q8N4C8 1332 aaPredicted RBP28.54■■■□□ 2.16
CLTA-202ENST00000345519 WASLO00401 505 aaPredicted RBP28.54■■■□□ 2.16
CLTA-202ENST00000345519 CRYBG1Q9Y4K1 1723 aa28.54■■■□□ 2.16
CLTA-202ENST00000345519 PRR36Q9H6K5 1346 aa28.53■■■□□ 2.16
CLTA-202ENST00000345519 NUTM2FA1L443 756 aa28.53■■■□□ 2.16
CLTA-202ENST00000345519 TONSLQ96HA7 1378 aa28.52■■■□□ 2.16
CLTA-202ENST00000345519 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
CLTA-202ENST00000345519 FOXO3O43524 673 aa28.51■■■□□ 2.15
CLTA-202ENST00000345519 HIRIP3Q9BW71 556 aaPredicted RBP28.51■■■□□ 2.15
CLTA-202ENST00000345519 PHF8Q9UPP1 1060 aa28.51■■■□□ 2.15
CLTA-202ENST00000345519 NBPF8Q3BBV2 869 aa28.5■■■□□ 2.15
CLTA-202ENST00000345519 ROCK2O75116 1388 aaKnown RBP28.5■■■□□ 2.15
CLTA-202ENST00000345519 CLSPNQ9HAW4 1339 aa28.49■■■□□ 2.15
CLTA-202ENST00000345519 TNS3Q68CZ2 1445 aa28.48■■■□□ 2.15
CLTA-202ENST00000345519 SBNO1A3KN83 1393 aa28.48■■■□□ 2.15
CLTA-202ENST00000345519 CENPJQ9HC77 1338 aaPredicted RBP28.47■■■□□ 2.15
CLTA-202ENST00000345519 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.46■■■□□ 2.15
CLTA-202ENST00000345519 SPATA31A3Q5VYP0 1347 aa28.45■■■□□ 2.15
CLTA-202ENST00000345519 SBNO2Q9Y2G9 1366 aa28.43■■■□□ 2.14
CLTA-202ENST00000345519 POLR3AO14802 1390 aaPredicted RBP28.41■■■□□ 2.14
CLTA-202ENST00000345519 AKAP12Q02952 1782 aa28.4■■■□□ 2.14
CLTA-202ENST00000345519 XPCQ01831 940 aaPredicted RBP28.39■■■□□ 2.14
CLTA-202ENST00000345519 KRT28Q7Z3Y7 464 aa28.39■■■□□ 2.14
CLTA-202ENST00000345519 PCGF6Q9BYE7 350 aa28.39■■■□□ 2.14
CLTA-202ENST00000345519 CDK19Q9BWU1 502 aa28.38■■■□□ 2.13
CLTA-202ENST00000345519 NWD2Q9ULI1 1742 aa28.38■■■□□ 2.13
CLTA-202ENST00000345519 POTEAQ6S8J7 498 aa28.37■■■□□ 2.13
CLTA-202ENST00000345519 NUDT16Q96DE0 195 aaKnown RBP28.37■■■□□ 2.13
CLTA-202ENST00000345519 ARHGEF10O15013 1369 aa28.37■■■□□ 2.13
CLTA-202ENST00000345519 PHRF1Q9P1Y6 1649 aaKnown RBP28.36■■■□□ 2.13
CLTA-202ENST00000345519 PLCH1Q4KWH8 1693 aa28.36■■■□□ 2.13
CLTA-202ENST00000345519 PSME1Q06323 249 aa28.36■■■□□ 2.13
CLTA-202ENST00000345519 NUTM2BA6NNL0 878 aaPredicted RBP28.34■■■□□ 2.13
CLTA-202ENST00000345519 NUTM2EB1AL46 878 aaPredicted RBP28.34■■■□□ 2.13
CLTA-202ENST00000345519 SOCS7O14512 581 aa28.34■■■□□ 2.13
CLTA-202ENST00000345519 MEX3CQ5U5Q3 659 aaKnown RBP28.34■■■□□ 2.13
CLTA-202ENST00000345519 NUTM2AQ8IVF1 878 aaPredicted RBP28.34■■■□□ 2.13
CLTA-202ENST00000345519 PMFBP1Q8TBY8 1022 aa28.34■■■□□ 2.13
CLTA-202ENST00000345519 ZNF772Q68DY9 489 aaPredicted RBP28.33■■■□□ 2.13
CLTA-202ENST00000345519 PLEKHG3A1L390 1219 aa28.32■■■□□ 2.12
CLTA-202ENST00000345519 TIMELESSQ9UNS1 1208 aa28.32■■■□□ 2.12
CLTA-202ENST00000345519 CCDC61Q9Y6R9 512 aa28.32■■■□□ 2.12
CLTA-202ENST00000345519 NRKQ7Z2Y5 1582 aa28.32■■■□□ 2.12
CLTA-202ENST00000345519 MON2Q7Z3U7 1717 aa28.3■■■□□ 2.12
CLTA-202ENST00000345519 CDK12Q9NYV4 1490 aaPredicted RBP28.3■■■□□ 2.12
CLTA-202ENST00000345519 PPIP5K1Q6PFW1 1433 aa28.3■■■□□ 2.12
CLTA-202ENST00000345519 AFF2P51816 1311 aa28.3■■■□□ 2.12
CLTA-202ENST00000345519 NRAPQ86VF7 1730 aa28.28■■■□□ 2.12
CLTA-202ENST00000345519 SLIT2O94813 1529 aa28.28■■■□□ 2.12
CLTA-202ENST00000345519 CARD11Q9BXL7 1154 aa28.27■■■□□ 2.12
CLTA-202ENST00000345519 EVC2Q86UK5 1308 aa28.26■■■□□ 2.11
CLTA-202ENST00000345519 FNBP4Q8N3X1 1017 aaPredicted RBP28.26■■■□□ 2.11
CLTA-202ENST00000345519 COL14A1Q05707 1796 aaKnown RBP28.25■■■□□ 2.11
CLTA-202ENST00000345519 BCL9LQ86UU0 1499 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms