RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 PDE4AP27815 886 aa28.04■■■□□ 2.08
CCDC38-201ENST00000344280 NKTRP30414 1462 aaKnown RBP28.03■■■□□ 2.08
CCDC38-201ENST00000344280 SHPRHQ149N8 1683 aa28.03■■■□□ 2.08
CCDC38-201ENST00000344280 CYB5RLQ6IPT4 315 aa28.03■■■□□ 2.08
CCDC38-201ENST00000344280 IPO9Q96P70 1041 aaKnown RBP28.03■■■□□ 2.08
CCDC38-201ENST00000344280 CABP2Q9NPB3 220 aa28.03■■■□□ 2.08
CCDC38-201ENST00000344280 BCAR3O75815 825 aa28.02■■■□□ 2.08
CCDC38-201ENST00000344280 E9PSI1 815 aa28.01■■■□□ 2.07
CCDC38-201ENST00000344280 EVC2Q86UK5 1308 aa28.01■■■□□ 2.07
CCDC38-201ENST00000344280 KDM2BQ8NHM5 1336 aa28.01■■■□□ 2.07
CCDC38-201ENST00000344280 BACH2Q9BYV9 841 aa28■■■□□ 2.07
CCDC38-201ENST00000344280 STK26Q9P289 416 aa28■■■□□ 2.07
CCDC38-201ENST00000344280 WWC1Q8IX03 1113 aa27.99■■■□□ 2.07
CCDC38-201ENST00000344280 MYO5BQ9ULV0 1848 aa27.99■■■□□ 2.07
CCDC38-201ENST00000344280 CGNL1Q0VF96 1302 aa27.99■■■□□ 2.07
CCDC38-201ENST00000344280 MS4A1P11836 297 aa27.99■■■□□ 2.07
CCDC38-201ENST00000344280 MTHFSP49914 203 aa27.98■■■□□ 2.07
CCDC38-201ENST00000344280 SLC52A1Q9NWF4 448 aa27.98■■■□□ 2.07
CCDC38-201ENST00000344280 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.97■■■□□ 2.07
CCDC38-201ENST00000344280 RRP7AQ9Y3A4 280 aaKnown RBP27.97■■■□□ 2.07
CCDC38-201ENST00000344280 NEUROD2Q15784 382 aa27.97■■■□□ 2.07
CCDC38-201ENST00000344280 FBXO31Q5XUX0 539 aaPredicted RBP27.97■■■□□ 2.07
CCDC38-201ENST00000344280 NPM2Q86SE8 214 aaKnown RBP27.97■■■□□ 2.07
CCDC38-201ENST00000344280 USP32Q8NFA0 1604 aa27.96■■■□□ 2.07
CCDC38-201ENST00000344280 ANKRD36BQ8N2N9 1353 aa27.95■■■□□ 2.07
CCDC38-201ENST00000344280 PREX1Q8TCU6 1659 aa27.94■■■□□ 2.06
CCDC38-201ENST00000344280 ZFYVE9O95405 1425 aa27.94■■■□□ 2.06
CCDC38-201ENST00000344280 PUS7Q96PZ0 661 aaKnown RBP27.93■■■□□ 2.06
CCDC38-201ENST00000344280 NGEFQ8N5V2 710 aa27.93■■■□□ 2.06
CCDC38-201ENST00000344280 TMEM131LA2VDJ0 1609 aa27.92■■■□□ 2.06
CCDC38-201ENST00000344280 RUNDC1Q96C34 613 aa27.92■■■□□ 2.06
CCDC38-201ENST00000344280 TCP11L2Q8N4U5 519 aa27.91■■■□□ 2.06
CCDC38-201ENST00000344280 CENPQQ7L2Z9 268 aaPredicted RBP27.9■■■□□ 2.06
CCDC38-201ENST00000344280 IQSEC2Q5JU85 1478 aa27.89■■■□□ 2.06
CCDC38-201ENST00000344280 FAM69CQ0P6D2 419 aa27.89■■■□□ 2.05
CCDC38-201ENST00000344280 ZBTB47Q9UFB7 747 aaPredicted RBP27.88■■■□□ 2.05
CCDC38-201ENST00000344280 A0A1W2PP64 1363 aa27.88■■■□□ 2.05
CCDC38-201ENST00000344280 SRPK2P78362 688 aaKnown RBP27.88■■■□□ 2.05
CCDC38-201ENST00000344280 PTPRMP28827 1452 aa27.87■■■□□ 2.05
CCDC38-201ENST00000344280 MINK1Q8N4C8 1332 aaPredicted RBP27.86■■■□□ 2.05
CCDC38-201ENST00000344280 PRAM1Q96QH2 718 aa27.86■■■□□ 2.05
CCDC38-201ENST00000344280 PHF23Q9BUL5 403 aaPredicted RBP27.85■■■□□ 2.05
CCDC38-201ENST00000344280 CFAP53Q96M91 514 aa27.84■■■□□ 2.05
CCDC38-201ENST00000344280 NSD2O96028 1365 aa27.83■■■□□ 2.05
CCDC38-201ENST00000344280 GGNBP2Q9H3C7 697 aa27.82■■■□□ 2.04
CCDC38-201ENST00000344280 YTHDC2Q9H6S0 1430 aaKnown RBP27.82■■■□□ 2.04
CCDC38-201ENST00000344280 NBR1Q14596 966 aa27.81■■■□□ 2.04
CCDC38-201ENST00000344280 ABCC11Q96J66 1382 aa27.81■■■□□ 2.04
CCDC38-201ENST00000344280 U2AF1L5P0DN76 240 aaPredicted RBP27.8■■■□□ 2.04
CCDC38-201ENST00000344280 U2AF1Q01081 240 aaKnown RBP eCLIP27.8■■■□□ 2.04
CCDC38-201ENST00000344280 POGKQ9P215 609 aa27.79■■■□□ 2.04
CCDC38-201ENST00000344280 PANK1Q8TE04 598 aa27.79■■■□□ 2.04
CCDC38-201ENST00000344280 TSPOAP1O95153 1857 aa27.79■■■□□ 2.04
CCDC38-201ENST00000344280 DIP2BQ9P265 1576 aa27.77■■■□□ 2.04
CCDC38-201ENST00000344280 CD163L1Q9NR16 1453 aa27.77■■■□□ 2.04
CCDC38-201ENST00000344280 ALKQ9UM73 1620 aa27.76■■■□□ 2.03
CCDC38-201ENST00000344280 STAG3Q9UJ98 1225 aa27.76■■■□□ 2.03
CCDC38-201ENST00000344280 RARSP54136 660 aaKnown RBP27.75■■■□□ 2.03
CCDC38-201ENST00000344280 WDR63Q8IWG1 891 aa27.75■■■□□ 2.03
CCDC38-201ENST00000344280 COG6Q9Y2V7 657 aa27.75■■■□□ 2.03
CCDC38-201ENST00000344280 NINLQ9Y2I6 1382 aa27.75■■■□□ 2.03
CCDC38-201ENST00000344280 FYB1O15117 783 aa27.75■■■□□ 2.03
CCDC38-201ENST00000344280 IGHDP01880 384 aa27.75■■■□□ 2.03
CCDC38-201ENST00000344280 PDE3AQ14432 1141 aa27.75■■■□□ 2.03
CCDC38-201ENST00000344280 FRAT1Q92837 279 aaPredicted RBP27.75■■■□□ 2.03
CCDC38-201ENST00000344280 CANXP27824 592 aaKnown RBP27.74■■■□□ 2.03
CCDC38-201ENST00000344280 CCDC27Q2M243 656 aa27.74■■■□□ 2.03
CCDC38-201ENST00000344280 ATAD2Q6PL18 1390 aa27.74■■■□□ 2.03
CCDC38-201ENST00000344280 RGS3P49796 1198 aa27.73■■■□□ 2.03
CCDC38-201ENST00000344280 RIMBP3CA6NJZ7 1639 aa27.73■■■□□ 2.03
CCDC38-201ENST00000344280 RIMBP3BA6NNM3 1639 aa27.73■■■□□ 2.03
CCDC38-201ENST00000344280 RIMBP3Q9UFD9 1639 aa27.73■■■□□ 2.03
CCDC38-201ENST00000344280 BCL2L13Q9BXK5 485 aa27.72■■■□□ 2.03
CCDC38-201ENST00000344280 TNNQ9UQP3 1299 aa27.72■■■□□ 2.03
CCDC38-201ENST00000344280 CDK19Q9BWU1 502 aa27.71■■■□□ 2.03
CCDC38-201ENST00000344280 NLRP1Q9C000 1473 aa27.71■■■□□ 2.03
CCDC38-201ENST00000344280 TERF2IPQ9NYB0 399 aa27.7■■■□□ 2.03
CCDC38-201ENST00000344280 MLECQ14165 292 aa27.7■■■□□ 2.02
CCDC38-201ENST00000344280 C8orf34Q49A92 452 aa27.7■■■□□ 2.02
CCDC38-201ENST00000344280 CLTCQ00610 1675 aaKnown RBP27.7■■■□□ 2.02
CCDC38-201ENST00000344280 U2SURPO15042 1029 aaKnown RBP27.69■■■□□ 2.02
CCDC38-201ENST00000344280 CABP1Q9NZU7 370 aa27.69■■■□□ 2.02
CCDC38-201ENST00000344280 COL3A1P02461 1466 aaPredicted RBP27.68■■■□□ 2.02
CCDC38-201ENST00000344280 CLUAP1Q96AJ1 413 aa27.68■■■□□ 2.02
CCDC38-201ENST00000344280 ARHGEF40Q8TER5 1519 aa27.68■■■□□ 2.02
CCDC38-201ENST00000344280 ADGRB2O60241 1585 aa27.68■■■□□ 2.02
CCDC38-201ENST00000344280 RLBP1P12271 317 aa27.67■■■□□ 2.02
CCDC38-201ENST00000344280 WAPLQ7Z5K2 1190 aa27.67■■■□□ 2.02
CCDC38-201ENST00000344280 PLEKHF1Q96S99 279 aa27.67■■■□□ 2.02
CCDC38-201ENST00000344280 FAM161AQ3B820 660 aa27.66■■■□□ 2.02
CCDC38-201ENST00000344280 A2ML1A8K2U0 1454 aa27.65■■■□□ 2.02
CCDC38-201ENST00000344280 AGLP35573 1532 aa27.64■■■□□ 2.01
CCDC38-201ENST00000344280 TSR2Q969E8 191 aaKnown RBP27.63■■■□□ 2.01
CCDC38-201ENST00000344280 REREQ9P2R6 1566 aa27.63■■■□□ 2.01
CCDC38-201ENST00000344280 MYH16Q9H6N6 1097 aa27.62■■■□□ 2.01
CCDC38-201ENST00000344280 HDGFL2Q7Z4V5 671 aaPredicted RBP27.62■■■□□ 2.01
CCDC38-201ENST00000344280 FBLN1P23142 703 aa27.61■■■□□ 2.01
CCDC38-201ENST00000344280 ANKRD26Q9UPS8 1709 aa27.61■■■□□ 2.01
CCDC38-201ENST00000344280 MED14O60244 1454 aa27.61■■■□□ 2.01
CCDC38-201ENST00000344280 NCBP3Q53F19 620 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms