RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CT47B1P0C2W7 299 aaPredicted RBP13.41□□□□□ -0.26
RPL28-201ENST00000344063 MPNDQ8N594 471 aa13.41□□□□□ -0.26
RPL28-201ENST00000344063 GRPEL1Q9HAV7 217 aa13.41□□□□□ -0.26
RPL28-201ENST00000344063 ZMYND15Q9H091 742 aa13.41□□□□□ -0.26
RPL28-201ENST00000344063 MCM4P33991 863 aa13.4□□□□□ -0.26
RPL28-201ENST00000344063 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
RPL28-201ENST00000344063 NAP1L2Q9ULW6 460 aaPredicted RBP13.4□□□□□ -0.26
RPL28-201ENST00000344063 CABP2Q9NPB3 220 aa13.4□□□□□ -0.26
RPL28-201ENST00000344063 RRP9O43818 475 aaKnown RBP13.39□□□□□ -0.27
RPL28-201ENST00000344063 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
RPL28-201ENST00000344063 REC8O95072 547 aa13.39□□□□□ -0.27
RPL28-201ENST00000344063 AMPHP49418 695 aa13.38□□□□□ -0.27
RPL28-201ENST00000344063 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
RPL28-201ENST00000344063 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
RPL28-201ENST00000344063 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
RPL28-201ENST00000344063 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
RPL28-201ENST00000344063 NRDCO43847 1150 aa13.37□□□□□ -0.27
RPL28-201ENST00000344063 RAPGEF6Q8TEU7 1601 aa13.37□□□□□ -0.27
RPL28-201ENST00000344063 TPM2P07951 284 aa13.37□□□□□ -0.27
RPL28-201ENST00000344063 NUP153P49790 1475 aaKnown RBP13.36□□□□□ -0.27
RPL28-201ENST00000344063 PHF14O94880 888 aa13.36□□□□□ -0.27
RPL28-201ENST00000344063 GPATCH3Q96I76 525 aa13.36□□□□□ -0.27
RPL28-201ENST00000344063 WWC1Q8IX03 1113 aa13.36□□□□□ -0.27
RPL28-201ENST00000344063 ZNF771Q7L3S4 317 aaPredicted RBP13.36□□□□□ -0.27
RPL28-201ENST00000344063 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
RPL28-201ENST00000344063 CSPP1Q1MSJ5 1256 aa13.35□□□□□ -0.27
RPL28-201ENST00000344063 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
RPL28-201ENST00000344063 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
RPL28-201ENST00000344063 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
RPL28-201ENST00000344063 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
RPL28-201ENST00000344063 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
RPL28-201ENST00000344063 NKTRP30414 1462 aaKnown RBP13.34□□□□□ -0.27
RPL28-201ENST00000344063 NUCB2P80303 420 aa13.34□□□□□ -0.27
RPL28-201ENST00000344063 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
RPL28-201ENST00000344063 INTS3Q68E01 1043 aaKnown RBP13.34□□□□□ -0.27
RPL28-201ENST00000344063 DNAJC5BQ9UF47 199 aa13.34□□□□□ -0.27
RPL28-201ENST00000344063 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.27
RPL28-201ENST00000344063 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
RPL28-201ENST00000344063 WDR62O43379 1518 aa13.33□□□□□ -0.28
RPL28-201ENST00000344063 CDC45O75419 566 aa13.33□□□□□ -0.28
RPL28-201ENST00000344063 TNNT3P45378 269 aaPredicted RBP13.33□□□□□ -0.28
RPL28-201ENST00000344063 HMOX1P09601 288 aa13.33□□□□□ -0.28
RPL28-201ENST00000344063 CHMP3Q9Y3E7 222 aa13.33□□□□□ -0.28
RPL28-201ENST00000344063 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
RPL28-201ENST00000344063 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
RPL28-201ENST00000344063 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
RPL28-201ENST00000344063 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
RPL28-201ENST00000344063 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
RPL28-201ENST00000344063 NUTM2FA1L443 756 aa13.32□□□□□ -0.28
RPL28-201ENST00000344063 RILPL2Q969X0 211 aa13.32□□□□□ -0.28
RPL28-201ENST00000344063 GCC1Q96CN9 775 aa13.32□□□□□ -0.28
RPL28-201ENST00000344063 SCAF11Q99590 1463 aaKnown RBP13.32□□□□□ -0.28
RPL28-201ENST00000344063 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
RPL28-201ENST00000344063 PRDM10Q9NQV6 1147 aa13.31□□□□□ -0.28
RPL28-201ENST00000344063 LRPPRCP42704 1394 aaKnown RBP13.31□□□□□ -0.28
RPL28-201ENST00000344063 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
RPL28-201ENST00000344063 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
RPL28-201ENST00000344063 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
RPL28-201ENST00000344063 PRPF40AO75400 957 aaKnown RBP13.3□□□□□ -0.28
RPL28-201ENST00000344063 TBC1D2Q9BYX2 928 aa13.3□□□□□ -0.28
RPL28-201ENST00000344063 ARHGEF12Q9NZN5 1544 aa13.3□□□□□ -0.28
RPL28-201ENST00000344063 NOB1Q9ULX3 412 aaKnown RBP13.3□□□□□ -0.28
RPL28-201ENST00000344063 CCDC173Q0VFZ6 552 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 ZNF428Q96B54 188 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 SLC52A1Q9NWF4 448 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 ATP6V1DQ9Y5K8 247 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 NUP160Q12769 1436 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
RPL28-201ENST00000344063 UQCRHLA0A096LP55 91 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 UQCRHP07919 91 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
RPL28-201ENST00000344063 RARSP54136 660 aaKnown RBP13.28□□□□□ -0.28
RPL28-201ENST00000344063 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
RPL28-201ENST00000344063 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPL28-201ENST00000344063 PRAM1Q96QH2 718 aa13.28□□□□□ -0.28
RPL28-201ENST00000344063 ATAD2Q6PL18 1390 aa13.28□□□□□ -0.28
RPL28-201ENST00000344063 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
RPL28-201ENST00000344063 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
RPL28-201ENST00000344063 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.28
RPL28-201ENST00000344063 C1orf115Q9H7X2 142 aa13.27□□□□□ -0.28
RPL28-201ENST00000344063 ADAMTS12P58397 1594 aa13.27□□□□□ -0.28
RPL28-201ENST00000344063 PZPP20742 1482 aa13.27□□□□□ -0.28
RPL28-201ENST00000344063 MAP7D2Q96T17 732 aa13.27□□□□□ -0.29
RPL28-201ENST00000344063 ISY1Q9ULR0 285 aaKnown RBP13.27□□□□□ -0.29
RPL28-201ENST00000344063 KIAA0556O60303 1618 aa13.27□□□□□ -0.29
RPL28-201ENST00000344063 ATP10BO94823 1461 aa13.27□□□□□ -0.29
RPL28-201ENST00000344063 SAMD9Q5K651 1589 aa13.27□□□□□ -0.29
RPL28-201ENST00000344063 RRAGDQ9NQL2 400 aaPredicted RBP13.27□□□□□ -0.29
RPL28-201ENST00000344063 TWISTNBQ3B726 338 aaPredicted RBP13.26□□□□□ -0.29
RPL28-201ENST00000344063 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
RPL28-201ENST00000344063 UHRF1BP1Q6BDS2 1440 aa13.25□□□□□ -0.29
RPL28-201ENST00000344063 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
RPL28-201ENST00000344063 FKBP5Q13451 457 aaPredicted RBP13.25□□□□□ -0.29
RPL28-201ENST00000344063 RABEP1Q15276 862 aa13.25□□□□□ -0.29
RPL28-201ENST00000344063 FAM135AQ9P2D6 1515 aa13.25□□□□□ -0.29
RPL28-201ENST00000344063 IGHDP01880 384 aa13.25□□□□□ -0.29
RPL28-201ENST00000344063 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
RPL28-201ENST00000344063 ANO2Q9NQ90 1003 aa13.25□□□□□ -0.29
RPL28-201ENST00000344063 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms