RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 REC8O95072 547 aa10.62□□□□□ -0.71
FGD6-201ENST00000343958 TPM4P67936 248 aa10.62□□□□□ -0.71
FGD6-201ENST00000343958 ANKRD30BQ9BXX2 1392 aa10.62□□□□□ -0.71
FGD6-201ENST00000343958 TTC5Q8N0Z6 440 aa10.61□□□□□ -0.71
FGD6-201ENST00000343958 NLRP6P59044 892 aa10.61□□□□□ -0.71
FGD6-201ENST00000343958 SLFN5Q08AF3 891 aa10.61□□□□□ -0.71
FGD6-201ENST00000343958 PDE3AQ14432 1141 aa10.61□□□□□ -0.71
FGD6-201ENST00000343958 PCF11O94913 1555 aaKnown RBP10.6□□□□□ -0.71
FGD6-201ENST00000343958 EPRSP07814 1512 aaKnown RBP10.6□□□□□ -0.71
FGD6-201ENST00000343958 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
FGD6-201ENST00000343958 CLSTN1O94985 981 aa10.6□□□□□ -0.71
FGD6-201ENST00000343958 VPS37CA5D8V6 355 aaPredicted RBP10.6□□□□□ -0.71
FGD6-201ENST00000343958 G3BP1Q13283 466 aaKnown RBP eCLIP10.6□□□□□ -0.71
FGD6-201ENST00000343958 PHF14O94880 888 aa10.59□□□□□ -0.71
FGD6-201ENST00000343958 RUFY2Q8WXA3 655 aa10.59□□□□□ -0.71
FGD6-201ENST00000343958 FBXW7Q969H0 707 aa10.59□□□□□ -0.71
FGD6-201ENST00000343958 ROCK1Q13464 1354 aa10.59□□□□□ -0.71
FGD6-201ENST00000343958 RAPGEF3O95398 923 aa10.59□□□□□ -0.71
FGD6-201ENST00000343958 NEXNQ0ZGT2 675 aa10.59□□□□□ -0.71
FGD6-201ENST00000343958 KDM4AO75164 1064 aa10.58□□□□□ -0.71
FGD6-201ENST00000343958 EVA1CP58658 441 aa10.58□□□□□ -0.71
FGD6-201ENST00000343958 UBTFL1P0CB47 393 aaPredicted RBP10.58□□□□□ -0.72
FGD6-201ENST00000343958 SULT6B1Q6IMI4 303 aa10.58□□□□□ -0.72
FGD6-201ENST00000343958 SMC3Q9UQE7 1217 aa10.58□□□□□ -0.72
FGD6-201ENST00000343958 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
FGD6-201ENST00000343958 TRAK2O60296 914 aa10.58□□□□□ -0.72
FGD6-201ENST00000343958 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
FGD6-201ENST00000343958 RRS1Q15050 365 aaKnown RBP10.58□□□□□ -0.72
FGD6-201ENST00000343958 RIC3Q7Z5B4 369 aa10.58□□□□□ -0.72
FGD6-201ENST00000343958 RASSF8Q8NHQ8 419 aa10.57□□□□□ -0.72
FGD6-201ENST00000343958 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
FGD6-201ENST00000343958 WWC1Q8IX03 1113 aa10.57□□□□□ -0.72
FGD6-201ENST00000343958 RSPH6AQ9H0K4 717 aa10.57□□□□□ -0.72
FGD6-201ENST00000343958 ZKSCAN1P17029 563 aaPredicted RBP10.57□□□□□ -0.72
FGD6-201ENST00000343958 WDR63Q8IWG1 891 aa10.57□□□□□ -0.72
FGD6-201ENST00000343958 THUMPD2Q9BTF0 503 aaKnown RBP10.57□□□□□ -0.72
FGD6-201ENST00000343958 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
FGD6-201ENST00000343958 AAMPQ13685 434 aa10.57□□□□□ -0.72
FGD6-201ENST00000343958 SURF6O75683 361 aaKnown RBP10.56□□□□□ -0.72
FGD6-201ENST00000343958 PLB1Q6P1J6 1458 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 ARHGEF11O15085 1522 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 NUCB2P80303 420 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 ABCA10Q8WWZ4 1543 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 GTF2E1P29083 439 aaPredicted RBP10.56□□□□□ -0.72
FGD6-201ENST00000343958 DDX58O95786 925 aaKnown RBP10.56□□□□□ -0.72
FGD6-201ENST00000343958 NLRP2Q9NX02 1062 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 PTPRKQ15262 1439 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 RNF214Q8ND24 703 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 NEUROD6Q96NK8 337 aa10.56□□□□□ -0.72
FGD6-201ENST00000343958 HECW1Q76N89 1606 aa10.55□□□□□ -0.72
FGD6-201ENST00000343958 BICD2Q8TD16 824 aa10.55□□□□□ -0.72
FGD6-201ENST00000343958 CC2D2AQ9P2K1 1620 aa10.55□□□□□ -0.72
FGD6-201ENST00000343958 NSD3Q9BZ95 1437 aa10.55□□□□□ -0.72
FGD6-201ENST00000343958 HSP90AA2PQ14568 343 aaPredicted RBP10.55□□□□□ -0.72
FGD6-201ENST00000343958 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
FGD6-201ENST00000343958 ZNF592Q92610 1267 aa10.55□□□□□ -0.72
FGD6-201ENST00000343958 GCC1Q96CN9 775 aa10.55□□□□□ -0.72
FGD6-201ENST00000343958 ADGRF5Q8IZF2 1346 aa10.55□□□□□ -0.72
FGD6-201ENST00000343958 KIAA0586Q9BVV6 1533 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 PRPF40AO75400 957 aaKnown RBP10.54□□□□□ -0.72
FGD6-201ENST00000343958 ATP6V1DQ9Y5K8 247 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 ATF7IPQ6VMQ6 1270 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 BECN2A8MW95 431 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 CCDC30Q5VVM6 783 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 RAPGEF4Q8WZA2 1011 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 SYTL4Q96C24 671 aaPredicted RBP10.54□□□□□ -0.72
FGD6-201ENST00000343958 TMEM57Q8N5G2 664 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 KIF3AQ9Y496 699 aa10.54□□□□□ -0.72
FGD6-201ENST00000343958 GOLGA6L19H0YKK7 550 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 APPP05067 770 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 NEK4P51957 841 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 ABTB2Q8N961 1025 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 CAMSAP2Q08AD1 1489 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 HSP90AB4PQ58FF6 505 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 ESCO1Q5FWF5 840 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 CAVIN1Q6NZI2 390 aaKnown RBP10.53□□□□□ -0.72
FGD6-201ENST00000343958 CHD1LQ86WJ1 897 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 GAS2L2Q8NHY3 880 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 DNAJC2Q99543 621 aaKnown RBP10.53□□□□□ -0.72
FGD6-201ENST00000343958 DCTN1Q14203 1278 aa10.53□□□□□ -0.72
FGD6-201ENST00000343958 ERC2O15083 957 aa10.52□□□□□ -0.72
FGD6-201ENST00000343958 MIS18AQ9NYP9 233 aa10.52□□□□□ -0.72
FGD6-201ENST00000343958 MRE11P49959 708 aa10.52□□□□□ -0.72
FGD6-201ENST00000343958 WAPLQ7Z5K2 1190 aa10.52□□□□□ -0.72
FGD6-201ENST00000343958 TMPOP42166 694 aaKnown RBP10.52□□□□□ -0.73
FGD6-201ENST00000343958 FSD1Q9BTV5 496 aa10.52□□□□□ -0.73
FGD6-201ENST00000343958 NCOA1Q15788 1441 aa10.52□□□□□ -0.73
FGD6-201ENST00000343958 RTEL1-TNFRSF6BF6WH68 1400 aa10.52□□□□□ -0.73
FGD6-201ENST00000343958 GNAI3P08754 354 aa10.52□□□□□ -0.73
FGD6-201ENST00000343958 PLEKHH2Q8IVE3 1493 aa10.51□□□□□ -0.73
FGD6-201ENST00000343958 DISP3Q9P2K9 1392 aa10.51□□□□□ -0.73
FGD6-201ENST00000343958 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
FGD6-201ENST00000343958 WASHC4Q2M389 1173 aa10.51□□□□□ -0.73
FGD6-201ENST00000343958 SMARCA5O60264 1052 aaPredicted RBP10.51□□□□□ -0.73
FGD6-201ENST00000343958 R3HCC1Q9Y3T6 440 aaKnown RBP10.51□□□□□ -0.73
FGD6-201ENST00000343958 PES1O00541 588 aaKnown RBP10.51□□□□□ -0.73
FGD6-201ENST00000343958 RNF20Q5VTR2 975 aa10.51□□□□□ -0.73
FGD6-201ENST00000343958 CNTROBQ8N137 903 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms