RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 TECPR2O15040 1411 aa19.25■□□□□ 0.67
PMS1-201ENST00000342075 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
PMS1-201ENST00000342075 XRN1Q8IZH2 1706 aaKnown RBP19.24■□□□□ 0.67
PMS1-201ENST00000342075 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.24■□□□□ 0.67
PMS1-201ENST00000342075 CHD2O14647 1828 aaKnown RBP19.23■□□□□ 0.67
PMS1-201ENST00000342075 NUTM2FA1L443 756 aa19.22■□□□□ 0.67
PMS1-201ENST00000342075 SRPK2P78362 688 aaKnown RBP19.21■□□□□ 0.67
PMS1-201ENST00000342075 PANK3Q9H999 370 aa19.2■□□□□ 0.66
PMS1-201ENST00000342075 TMC1Q8TDI8 760 aa19.19■□□□□ 0.66
PMS1-201ENST00000342075 CDK19Q9BWU1 502 aa19.19■□□□□ 0.66
PMS1-201ENST00000342075 EVC2Q86UK5 1308 aa19.19■□□□□ 0.66
PMS1-201ENST00000342075 SLC12A5Q9H2X9 1139 aa19.19■□□□□ 0.66
PMS1-201ENST00000342075 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
PMS1-201ENST00000342075 STRCP1A6NGW2 1772 aa19.18■□□□□ 0.66
PMS1-201ENST00000342075 PTCH1Q13635 1447 aa19.16■□□□□ 0.66
PMS1-201ENST00000342075 CDCA8Q53HL2 280 aa19.14■□□□□ 0.66
PMS1-201ENST00000342075 PIK3R4Q99570 1358 aa19.14■□□□□ 0.66
PMS1-201ENST00000342075 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
PMS1-201ENST00000342075 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
PMS1-201ENST00000342075 NALCNQ8IZF0 1738 aa19.13■□□□□ 0.65
PMS1-201ENST00000342075 PRR36Q9H6K5 1346 aa19.12■□□□□ 0.65
PMS1-201ENST00000342075 PER1O15534 1290 aaPredicted RBP19.12■□□□□ 0.65
PMS1-201ENST00000342075 CARD14Q9BXL6 1004 aa19.11■□□□□ 0.65
PMS1-201ENST00000342075 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
PMS1-201ENST00000342075 ANP32CO43423 234 aa19.1■□□□□ 0.65
PMS1-201ENST00000342075 RGPD8O14715 1765 aaPredicted RBP19.1■□□□□ 0.65
PMS1-201ENST00000342075 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
PMS1-201ENST00000342075 NWD1Q149M9 1564 aa19.09■□□□□ 0.65
PMS1-201ENST00000342075 CC2D1BQ5T0F9 858 aaKnown RBP19.09■□□□□ 0.65
PMS1-201ENST00000342075 ADGRB2O60241 1585 aa19.08■□□□□ 0.64
PMS1-201ENST00000342075 SLC24A1O60721 1099 aa19.07■□□□□ 0.64
PMS1-201ENST00000342075 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
PMS1-201ENST00000342075 PROSER2Q86WR7 435 aaPredicted RBP19.07■□□□□ 0.64
PMS1-201ENST00000342075 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
PMS1-201ENST00000342075 ATP7BP35670 1465 aa19.07■□□□□ 0.64
PMS1-201ENST00000342075 USP32Q8NFA0 1604 aa19.07■□□□□ 0.64
PMS1-201ENST00000342075 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
PMS1-201ENST00000342075 CD163L1Q9NR16 1453 aa19.06■□□□□ 0.64
PMS1-201ENST00000342075 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
PMS1-201ENST00000342075 CCDC184Q52MB2 194 aa19.06■□□□□ 0.64
PMS1-201ENST00000342075 PPIP5K1Q6PFW1 1433 aa19.05■□□□□ 0.64
PMS1-201ENST00000342075 ATAD2Q6PL18 1390 aa19.04■□□□□ 0.64
PMS1-201ENST00000342075 NSD3Q9BZ95 1437 aa19.04■□□□□ 0.64
PMS1-201ENST00000342075 TMEM94Q12767 1356 aa19.03■□□□□ 0.64
PMS1-201ENST00000342075 PMFBP1Q8TBY8 1022 aa19.02■□□□□ 0.64
PMS1-201ENST00000342075 KNSTRNQ9Y448 316 aa19.02■□□□□ 0.64
PMS1-201ENST00000342075 NKTRP30414 1462 aaKnown RBP19.02■□□□□ 0.64
PMS1-201ENST00000342075 AMER1Q5JTC6 1135 aaPredicted RBP19.01■□□□□ 0.63
PMS1-201ENST00000342075 ADGRL3Q9HAR2 1447 aa19.01■□□□□ 0.63
PMS1-201ENST00000342075 XIRP1Q702N8 1843 aaKnown RBP19.01■□□□□ 0.63
PMS1-201ENST00000342075 ANKRD36BQ8N2N9 1353 aa19■□□□□ 0.63
PMS1-201ENST00000342075 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
PMS1-201ENST00000342075 FMN2Q9NZ56 1722 aa19■□□□□ 0.63
PMS1-201ENST00000342075 CCDC61Q9Y6R9 512 aa19■□□□□ 0.63
PMS1-201ENST00000342075 TOPAZ1Q8N9V7 1692 aa18.99■□□□□ 0.63
PMS1-201ENST00000342075 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.98■□□□□ 0.63
PMS1-201ENST00000342075 CDC42BPGQ6DT37 1551 aa18.97■□□□□ 0.63
PMS1-201ENST00000342075 YTHDC1Q96MU7 727 aaKnown RBP18.97■□□□□ 0.63
PMS1-201ENST00000342075 KTN1Q86UP2 1357 aaKnown RBP18.96■□□□□ 0.63
PMS1-201ENST00000342075 TNNT2P45379 298 aaPredicted RBP18.95■□□□□ 0.62
PMS1-201ENST00000342075 LRRC7Q96NW7 1537 aa18.95■□□□□ 0.62
PMS1-201ENST00000342075 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
PMS1-201ENST00000342075 ACEP12821 1306 aa18.95■□□□□ 0.62
PMS1-201ENST00000342075 ORAI2Q96SN7 254 aa18.94■□□□□ 0.62
PMS1-201ENST00000342075 TERF2IPQ9NYB0 399 aa18.94■□□□□ 0.62
PMS1-201ENST00000342075 GGNBP2Q9H3C7 697 aa18.94■□□□□ 0.62
PMS1-201ENST00000342075 PARD3Q8TEW0 1356 aa18.94■□□□□ 0.62
PMS1-201ENST00000342075 ITSN1Q15811 1721 aa18.94■□□□□ 0.62
PMS1-201ENST00000342075 ZRANB1Q9UGI0 708 aa18.93■□□□□ 0.62
PMS1-201ENST00000342075 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
PMS1-201ENST00000342075 CPSF1Q10570 1443 aaKnown RBP18.93■□□□□ 0.62
PMS1-201ENST00000342075 HDGFL2Q7Z4V5 671 aaPredicted RBP18.93■□□□□ 0.62
PMS1-201ENST00000342075 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
PMS1-201ENST00000342075 ESCO1Q5FWF5 840 aa18.92■□□□□ 0.62
PMS1-201ENST00000342075 C19orf44Q9H6X5 657 aa18.92■□□□□ 0.62
PMS1-201ENST00000342075 MON2Q7Z3U7 1717 aa18.9■□□□□ 0.62
PMS1-201ENST00000342075 FBLN1P23142 703 aa18.9■□□□□ 0.62
PMS1-201ENST00000342075 XPCQ01831 940 aaPredicted RBP18.9■□□□□ 0.62
PMS1-201ENST00000342075 NME9Q86XW9 330 aa18.9■□□□□ 0.62
PMS1-201ENST00000342075 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
PMS1-201ENST00000342075 FYB1O15117 783 aa18.89■□□□□ 0.61
PMS1-201ENST00000342075 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
PMS1-201ENST00000342075 DDX17Q92841 729 aaKnown RBP18.89■□□□□ 0.61
PMS1-201ENST00000342075 CGNL1Q0VF96 1302 aa18.89■□□□□ 0.61
PMS1-201ENST00000342075 PLEKHG3A1L390 1219 aa18.89■□□□□ 0.61
PMS1-201ENST00000342075 MRS2Q9HD23 443 aa18.88■□□□□ 0.61
PMS1-201ENST00000342075 ANKARQ7Z5J8 1434 aa18.88■□□□□ 0.61
PMS1-201ENST00000342075 ATF3P18847 181 aa18.87■□□□□ 0.61
PMS1-201ENST00000342075 MYBBP1AQ9BQG0 1328 aaKnown RBP18.87■□□□□ 0.61
PMS1-201ENST00000342075 RALBP1Q15311 655 aa18.87■□□□□ 0.61
PMS1-201ENST00000342075 KIF20BQ96Q89 1820 aa18.86■□□□□ 0.61
PMS1-201ENST00000342075 CCER2I3L3R5 266 aa18.86■□□□□ 0.61
PMS1-201ENST00000342075 PHF8Q9UPP1 1060 aa18.86■□□□□ 0.61
PMS1-201ENST00000342075 USP6P35125 1406 aa18.86■□□□□ 0.61
PMS1-201ENST00000342075 MST1RQ04912 1400 aa18.86■□□□□ 0.61
PMS1-201ENST00000342075 NRKQ7Z2Y5 1582 aa18.86■□□□□ 0.61
PMS1-201ENST00000342075 C1orf167Q5SNV9 1468 aa18.86■□□□□ 0.61
PMS1-201ENST00000342075 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
PMS1-201ENST00000342075 MSH6P52701 1360 aa18.85■□□□□ 0.61
PMS1-201ENST00000342075 FOXO3O43524 673 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms