RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ESPNB1AK53 854 aa18.12■□□□□ 0.49
RRP1B-201ENST00000340648 RBM10P98175 930 aaKnown RBP18.11■□□□□ 0.49
RRP1B-201ENST00000340648 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
RRP1B-201ENST00000340648 SCAPERQ9BY12 1400 aa18.11■□□□□ 0.49
RRP1B-201ENST00000340648 DIAPH3Q9NSV4 1193 aa18.1■□□□□ 0.49
RRP1B-201ENST00000340648 NGDNQ8NEJ9 315 aaKnown RBP18.1■□□□□ 0.49
RRP1B-201ENST00000340648 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
RRP1B-201ENST00000340648 K7ELQ4 463 aaPredicted RBP18.09■□□□□ 0.49
RRP1B-201ENST00000340648 CCDC39Q9UFE4 941 aa18.09■□□□□ 0.49
RRP1B-201ENST00000340648 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
RRP1B-201ENST00000340648 CAMSAP2Q08AD1 1489 aa18.09■□□□□ 0.49
RRP1B-201ENST00000340648 TPM4P67936 248 aa18.09■□□□□ 0.49
RRP1B-201ENST00000340648 RABEP1Q15276 862 aa18.09■□□□□ 0.49
RRP1B-201ENST00000340648 TBC1D2Q9BYX2 928 aa18.09■□□□□ 0.49
RRP1B-201ENST00000340648 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.49
RRP1B-201ENST00000340648 PRKAR2BP31323 418 aa18.08■□□□□ 0.49
RRP1B-201ENST00000340648 GCC1Q96CN9 775 aa18.08■□□□□ 0.49
RRP1B-201ENST00000340648 ZNF592Q92610 1267 aa18.08■□□□□ 0.49
RRP1B-201ENST00000340648 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.48
RRP1B-201ENST00000340648 CHMP4AQ9BY43 222 aa18.08■□□□□ 0.48
RRP1B-201ENST00000340648 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
RRP1B-201ENST00000340648 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
RRP1B-201ENST00000340648 VPS37CA5D8V6 355 aaPredicted RBP18.07■□□□□ 0.48
RRP1B-201ENST00000340648 GOLGA6L19H0YKK7 550 aa18.07■□□□□ 0.48
RRP1B-201ENST00000340648 H3BQV1 296 aa18.07■□□□□ 0.48
RRP1B-201ENST00000340648 IFFO2Q5TF58 517 aa18.07■□□□□ 0.48
RRP1B-201ENST00000340648 CHD1LQ86WJ1 897 aa18.07■□□□□ 0.48
RRP1B-201ENST00000340648 LRPPRCP42704 1394 aaKnown RBP18.07■□□□□ 0.48
RRP1B-201ENST00000340648 NEK4P51957 841 aa18.07■□□□□ 0.48
RRP1B-201ENST00000340648 HDAC5Q9UQL6 1122 aa18.07■□□□□ 0.48
RRP1B-201ENST00000340648 IGHDP01880 384 aa18.06■□□□□ 0.48
RRP1B-201ENST00000340648 RARSP54136 660 aaKnown RBP18.06■□□□□ 0.48
RRP1B-201ENST00000340648 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
RRP1B-201ENST00000340648 PKNOX2Q96KN3 472 aa18.06■□□□□ 0.48
RRP1B-201ENST00000340648 SMC3Q9UQE7 1217 aa18.06■□□□□ 0.48
RRP1B-201ENST00000340648 BECN2A8MW95 431 aa18.05■□□□□ 0.48
RRP1B-201ENST00000340648 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
RRP1B-201ENST00000340648 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
RRP1B-201ENST00000340648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.03■□□□□ 0.48
RRP1B-201ENST00000340648 SF3A1Q15459 793 aaKnown RBP18.03■□□□□ 0.48
RRP1B-201ENST00000340648 FAM184AQ8NB25 1140 aa18.03■□□□□ 0.48
RRP1B-201ENST00000340648 CUL7Q14999 1698 aa18.03■□□□□ 0.48
RRP1B-201ENST00000340648 MBD3O95983 291 aa18.03■□□□□ 0.48
RRP1B-201ENST00000340648 TMEM57Q8N5G2 664 aa18.03■□□□□ 0.48
RRP1B-201ENST00000340648 CIZ1Q9ULV3 898 aaPredicted RBP18.03■□□□□ 0.48
RRP1B-201ENST00000340648 DISP3Q9P2K9 1392 aa18.03■□□□□ 0.48
RRP1B-201ENST00000340648 CT47B1P0C2W7 299 aaPredicted RBP18.03■□□□□ 0.48
RRP1B-201ENST00000340648 ZKSCAN1P17029 563 aaPredicted RBP18.03■□□□□ 0.48
RRP1B-201ENST00000340648 ZNF771Q7L3S4 317 aaPredicted RBP18.03■□□□□ 0.48
RRP1B-201ENST00000340648 CCDC9Q9Y3X0 531 aaKnown RBP18.02■□□□□ 0.48
RRP1B-201ENST00000340648 RUFY2Q8WXA3 655 aa18.02■□□□□ 0.48
RRP1B-201ENST00000340648 MAP7D2Q96T17 732 aa18.02■□□□□ 0.47
RRP1B-201ENST00000340648 TSPYL4Q9UJ04 414 aa18.02■□□□□ 0.47
RRP1B-201ENST00000340648 MPNDQ8N594 471 aa18.02■□□□□ 0.47
RRP1B-201ENST00000340648 IQGAP2Q13576 1575 aa18.02■□□□□ 0.47
RRP1B-201ENST00000340648 TSPY26PQ9H489 355 aa18.01■□□□□ 0.47
RRP1B-201ENST00000340648 C8orf34Q49A92 452 aa18.01■□□□□ 0.47
RRP1B-201ENST00000340648 BICD2Q8TD16 824 aa18.01■□□□□ 0.47
RRP1B-201ENST00000340648 ZNF330Q9Y3S2 320 aaPredicted RBP18.01■□□□□ 0.47
RRP1B-201ENST00000340648 GORABQ5T7V8 394 aa18■□□□□ 0.47
RRP1B-201ENST00000340648 NSD3Q9BZ95 1437 aa18■□□□□ 0.47
RRP1B-201ENST00000340648 KIF3AQ9Y496 699 aa18■□□□□ 0.47
RRP1B-201ENST00000340648 RRP9O43818 475 aaKnown RBP18■□□□□ 0.47
RRP1B-201ENST00000340648 CCDC27Q2M243 656 aa18■□□□□ 0.47
RRP1B-201ENST00000340648 TNNT3P45378 269 aaPredicted RBP17.99■□□□□ 0.47
RRP1B-201ENST00000340648 BCL11BQ9C0K0 894 aaPredicted RBP17.99■□□□□ 0.47
RRP1B-201ENST00000340648 ARHGEF11O15085 1522 aa17.99■□□□□ 0.47
RRP1B-201ENST00000340648 IFT57Q9NWB7 429 aa17.99■□□□□ 0.47
RRP1B-201ENST00000340648 IFIT2P09913 472 aaKnown RBP17.98■□□□□ 0.47
RRP1B-201ENST00000340648 MTERF4Q7Z6M4 381 aaKnown RBP17.97■□□□□ 0.47
RRP1B-201ENST00000340648 C9orf78Q9NZ63 289 aaPredicted RBP17.97■□□□□ 0.47
RRP1B-201ENST00000340648 SSH1Q8WYL5 1049 aa17.97■□□□□ 0.47
RRP1B-201ENST00000340648 CWC22Q9HCG8 908 aaKnown RBP17.97■□□□□ 0.47
RRP1B-201ENST00000340648 TULP1O00294 542 aaPredicted RBP17.96■□□□□ 0.47
RRP1B-201ENST00000340648 TBC1D32Q96NH3 1257 aa17.96■□□□□ 0.47
RRP1B-201ENST00000340648 SNAPC4Q5SXM2 1469 aa17.96■□□□□ 0.47
RRP1B-201ENST00000340648 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
RRP1B-201ENST00000340648 DHX29Q7Z478 1369 aaKnown RBP17.96■□□□□ 0.47
RRP1B-201ENST00000340648 UGGT2Q9NYU1 1516 aa17.95■□□□□ 0.46
RRP1B-201ENST00000340648 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
RRP1B-201ENST00000340648 ZSCAN30Q86W11 494 aa17.95■□□□□ 0.46
RRP1B-201ENST00000340648 CSB-PGBD3P0DP91 1061 aa17.95■□□□□ 0.46
RRP1B-201ENST00000340648 PLB1Q6P1J6 1458 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 KIAA0586Q9BVV6 1533 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 FIBPO43427 364 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 UQCRHLA0A096LP55 91 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 ERC2O15083 957 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 UQCRHP07919 91 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 MCM2P49736 904 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 SASS6Q6UVJ0 657 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 TEFQ10587 303 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 PRAM1Q96QH2 718 aa17.94■□□□□ 0.46
RRP1B-201ENST00000340648 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
RRP1B-201ENST00000340648 PARD3Q8TEW0 1356 aa17.93■□□□□ 0.46
RRP1B-201ENST00000340648 CCDC141Q6ZP82 1450 aa17.93■□□□□ 0.46
RRP1B-201ENST00000340648 RALGAPBQ86X10 1494 aa17.93■□□□□ 0.46
RRP1B-201ENST00000340648 UBTFL1P0CB47 393 aaPredicted RBP17.92■□□□□ 0.46
RRP1B-201ENST00000340648 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms