RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
CCDC144A-202ENST00000340621 CGNL1Q0VF96 1302 aa21.03■□□□□ 0.96
CCDC144A-202ENST00000340621 APAF1O14727 1248 aa21.02■□□□□ 0.96
CCDC144A-202ENST00000340621 EXOC6Q8TAG9 804 aa21.02■□□□□ 0.96
CCDC144A-202ENST00000340621 YTHDC2Q9H6S0 1430 aaKnown RBP21.02■□□□□ 0.96
CCDC144A-202ENST00000340621 POLR3AO14802 1390 aaPredicted RBP21.02■□□□□ 0.96
CCDC144A-202ENST00000340621 SRPK2P78362 688 aaKnown RBP21.01■□□□□ 0.95
CCDC144A-202ENST00000340621 POGKQ9P215 609 aa21.01■□□□□ 0.95
CCDC144A-202ENST00000340621 CLTCQ00610 1675 aaKnown RBP21.01■□□□□ 0.95
CCDC144A-202ENST00000340621 ANKRD36BQ8N2N9 1353 aa21.01■□□□□ 0.95
CCDC144A-202ENST00000340621 GOLGA2Q08379 1002 aa21.01■□□□□ 0.95
CCDC144A-202ENST00000340621 DUSP27Q5VZP5 1158 aa21.01■□□□□ 0.95
CCDC144A-202ENST00000340621 MINK1Q8N4C8 1332 aaPredicted RBP21■□□□□ 0.95
CCDC144A-202ENST00000340621 PTPRMP28827 1452 aa21■□□□□ 0.95
CCDC144A-202ENST00000340621 PLIN1O60240 522 aa21■□□□□ 0.95
CCDC144A-202ENST00000340621 A2ML1A8K2U0 1454 aa20.99■□□□□ 0.95
CCDC144A-202ENST00000340621 ALKQ9UM73 1620 aa20.98■□□□□ 0.95
CCDC144A-202ENST00000340621 SPATA31D1Q6ZQQ2 1576 aa20.98■□□□□ 0.95
CCDC144A-202ENST00000340621 KIF13AQ9H1H9 1805 aa20.97■□□□□ 0.95
CCDC144A-202ENST00000340621 MTHFSP49914 203 aa20.97■□□□□ 0.95
CCDC144A-202ENST00000340621 SLFN5Q08AF3 891 aa20.97■□□□□ 0.95
CCDC144A-202ENST00000340621 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
CCDC144A-202ENST00000340621 ESF1Q9H501 851 aaKnown RBP20.96■□□□□ 0.95
CCDC144A-202ENST00000340621 ARHGEF40Q8TER5 1519 aa20.96■□□□□ 0.95
CCDC144A-202ENST00000340621 RIMS2Q9UQ26 1411 aa20.95■□□□□ 0.94
CCDC144A-202ENST00000340621 SPINK5Q9NQ38 1064 aaPredicted RBP20.94■□□□□ 0.94
CCDC144A-202ENST00000340621 TRMT2AQ8IZ69 625 aaKnown RBP20.94■□□□□ 0.94
CCDC144A-202ENST00000340621 A0A1W2PP64 1363 aa20.94■□□□□ 0.94
CCDC144A-202ENST00000340621 USP32Q8NFA0 1604 aa20.93■□□□□ 0.94
CCDC144A-202ENST00000340621 CDK19Q9BWU1 502 aa20.93■□□□□ 0.94
CCDC144A-202ENST00000340621 NINLQ9Y2I6 1382 aa20.92■□□□□ 0.94
CCDC144A-202ENST00000340621 NSD2O96028 1365 aa20.92■□□□□ 0.94
CCDC144A-202ENST00000340621 ATAD2Q6PL18 1390 aa20.92■□□□□ 0.94
CCDC144A-202ENST00000340621 WAPLQ7Z5K2 1190 aa20.92■□□□□ 0.94
CCDC144A-202ENST00000340621 NGEFQ8N5V2 710 aa20.9■□□□□ 0.94
CCDC144A-202ENST00000340621 TERF2IPQ9NYB0 399 aa20.9■□□□□ 0.94
CCDC144A-202ENST00000340621 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
CCDC144A-202ENST00000340621 ABCC11Q96J66 1382 aa20.89■□□□□ 0.94
CCDC144A-202ENST00000340621 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
CCDC144A-202ENST00000340621 GGNBP2Q9H3C7 697 aa20.89■□□□□ 0.93
CCDC144A-202ENST00000340621 C20orf194Q5TEA3 1177 aa20.88■□□□□ 0.93
CCDC144A-202ENST00000340621 CRBNQ96SW2 442 aa20.88■□□□□ 0.93
CCDC144A-202ENST00000340621 CABP1Q9NZU7 370 aa20.88■□□□□ 0.93
CCDC144A-202ENST00000340621 FYB1O15117 783 aa20.87■□□□□ 0.93
CCDC144A-202ENST00000340621 WWC1Q8IX03 1113 aa20.87■□□□□ 0.93
CCDC144A-202ENST00000340621 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCDC144A-202ENST00000340621 RUNDC1Q96C34 613 aa20.87■□□□□ 0.93
CCDC144A-202ENST00000340621 E9PSI1 815 aa20.86■□□□□ 0.93
CCDC144A-202ENST00000340621 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
CCDC144A-202ENST00000340621 SHPRHQ149N8 1683 aa20.85■□□□□ 0.93
CCDC144A-202ENST00000340621 TCP11L2Q8N4U5 519 aa20.85■□□□□ 0.93
CCDC144A-202ENST00000340621 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
CCDC144A-202ENST00000340621 METP08581 1390 aa20.84■□□□□ 0.93
CCDC144A-202ENST00000340621 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
CCDC144A-202ENST00000340621 RRP7AQ9Y3A4 280 aaKnown RBP20.84■□□□□ 0.93
CCDC144A-202ENST00000340621 MYT1Q01538 1121 aa20.82■□□□□ 0.92
CCDC144A-202ENST00000340621 TNRQ92752 1358 aa20.82■□□□□ 0.92
CCDC144A-202ENST00000340621 DLC1Q96QB1 1528 aa20.82■□□□□ 0.92
CCDC144A-202ENST00000340621 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
CCDC144A-202ENST00000340621 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
CCDC144A-202ENST00000340621 U2AF1L5P0DN76 240 aaPredicted RBP20.81■□□□□ 0.92
CCDC144A-202ENST00000340621 HDGFP51858 240 aaKnown RBP20.81■□□□□ 0.92
CCDC144A-202ENST00000340621 U2AF1Q01081 240 aaKnown RBP eCLIP20.81■□□□□ 0.92
CCDC144A-202ENST00000340621 TXNDC2Q86VQ3 553 aa20.81■□□□□ 0.92
CCDC144A-202ENST00000340621 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
CCDC144A-202ENST00000340621 NLRP1Q9C000 1473 aa20.79■□□□□ 0.92
CCDC144A-202ENST00000340621 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.78■□□□□ 0.92
CCDC144A-202ENST00000340621 SETD1AO15047 1707 aaKnown RBP20.78■□□□□ 0.92
CCDC144A-202ENST00000340621 BCAR3O75815 825 aa20.78■□□□□ 0.92
CCDC144A-202ENST00000340621 NRXN3Q9Y4C0 1643 aa20.77■□□□□ 0.92
CCDC144A-202ENST00000340621 WASLO00401 505 aaPredicted RBP20.76■□□□□ 0.91
CCDC144A-202ENST00000340621 TMEM2Q9UHN6 1383 aa20.76■□□□□ 0.91
CCDC144A-202ENST00000340621 IQSEC2Q5JU85 1478 aa20.76■□□□□ 0.91
CCDC144A-202ENST00000340621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.76■□□□□ 0.91
CCDC144A-202ENST00000340621 MED14O60244 1454 aa20.75■□□□□ 0.91
CCDC144A-202ENST00000340621 CEBPAP49715 358 aaPredicted RBP20.75■□□□□ 0.91
CCDC144A-202ENST00000340621 MSH5O43196 834 aa20.74■□□□□ 0.91
CCDC144A-202ENST00000340621 WDR63Q8IWG1 891 aa20.74■□□□□ 0.91
CCDC144A-202ENST00000340621 U2SURPO15042 1029 aaKnown RBP20.74■□□□□ 0.91
CCDC144A-202ENST00000340621 CCDC27Q2M243 656 aa20.74■□□□□ 0.91
CCDC144A-202ENST00000340621 SIRT1Q96EB6 747 aa20.73■□□□□ 0.91
CCDC144A-202ENST00000340621 PLEKHF1Q96S99 279 aa20.72■□□□□ 0.91
CCDC144A-202ENST00000340621 FBLN1P23142 703 aa20.7■□□□□ 0.9
CCDC144A-202ENST00000340621 LTKP29376 864 aa20.7■□□□□ 0.9
CCDC144A-202ENST00000340621 NCBP3Q53F19 620 aaKnown RBP20.7■□□□□ 0.9
CCDC144A-202ENST00000340621 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
CCDC144A-202ENST00000340621 NUDT16Q96DE0 195 aaKnown RBP20.7■□□□□ 0.9
CCDC144A-202ENST00000340621 ATP7BP35670 1465 aa20.7■□□□□ 0.9
CCDC144A-202ENST00000340621 NCKAP5LQ9HCH0 1330 aa20.69■□□□□ 0.9
CCDC144A-202ENST00000340621 FAM135BQ49AJ0 1406 aa20.69■□□□□ 0.9
CCDC144A-202ENST00000340621 TCERG1O14776 1098 aaKnown RBP20.69■□□□□ 0.9
CCDC144A-202ENST00000340621 TECPR2O15040 1411 aa20.68■□□□□ 0.9
CCDC144A-202ENST00000340621 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
CCDC144A-202ENST00000340621 DIAPH1O60610 1272 aaKnown RBP20.68■□□□□ 0.9
CCDC144A-202ENST00000340621 PNPLA6Q8IY17 1366 aa20.68■□□□□ 0.9
CCDC144A-202ENST00000340621 CPSF1Q10570 1443 aaKnown RBP20.67■□□□□ 0.9
CCDC144A-202ENST00000340621 CCDC61Q9Y6R9 512 aa20.67■□□□□ 0.9
CCDC144A-202ENST00000340621 POLKQ9UBT6 870 aa20.66■□□□□ 0.9
CCDC144A-202ENST00000340621 UBR1Q8IWV7 1749 aa20.66■□□□□ 0.9
CCDC144A-202ENST00000340621 ADAMTS13Q76LX8 1427 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms