RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FMN2Q9NZ56 1722 aa9.92□□□□□ -0.82
NUP43-201ENST00000340413 NPHP4O75161 1426 aaPredicted RBP9.91□□□□□ -0.82
NUP43-201ENST00000340413 RALBP1Q15311 655 aa9.9□□□□□ -0.83
NUP43-201ENST00000340413 KIF20BQ96Q89 1820 aa9.9□□□□□ -0.83
NUP43-201ENST00000340413 ANP32CO43423 234 aa9.89□□□□□ -0.83
NUP43-201ENST00000340413 ANKLE2Q86XL3 938 aa9.89□□□□□ -0.83
NUP43-201ENST00000340413 PARD3Q8TEW0 1356 aa9.89□□□□□ -0.83
NUP43-201ENST00000340413 NRKQ7Z2Y5 1582 aa9.88□□□□□ -0.83
NUP43-201ENST00000340413 C11orf95C9JLR9 678 aaPredicted RBP9.88□□□□□ -0.83
NUP43-201ENST00000340413 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.88□□□□□ -0.83
NUP43-201ENST00000340413 ANKRD36BQ8N2N9 1353 aa9.88□□□□□ -0.83
NUP43-201ENST00000340413 DCCP43146 1447 aa9.88□□□□□ -0.83
NUP43-201ENST00000340413 TXNDC2Q86VQ3 553 aa9.87□□□□□ -0.83
NUP43-201ENST00000340413 KIF1AQ12756 1690 aa9.87□□□□□ -0.83
NUP43-201ENST00000340413 METP08581 1390 aa9.87□□□□□ -0.83
NUP43-201ENST00000340413 PTPRUQ92729 1446 aa9.86□□□□□ -0.83
NUP43-201ENST00000340413 LTKP29376 864 aa9.85□□□□□ -0.83
NUP43-201ENST00000340413 DDX10Q13206 875 aaKnown RBP9.85□□□□□ -0.83
NUP43-201ENST00000340413 NALCNQ8IZF0 1738 aa9.85□□□□□ -0.83
NUP43-201ENST00000340413 PER1O15534 1290 aaPredicted RBP9.85□□□□□ -0.83
NUP43-201ENST00000340413 STRCQ7RTU9 1775 aa9.84□□□□□ -0.83
NUP43-201ENST00000340413 CEBPAP49715 358 aaPredicted RBP9.84□□□□□ -0.83
NUP43-201ENST00000340413 CPSF1Q10570 1443 aaKnown RBP9.83□□□□□ -0.84
NUP43-201ENST00000340413 PRKRIP1Q9H875 184 aaPredicted RBP9.83□□□□□ -0.84
NUP43-201ENST00000340413 MST1RQ04912 1400 aa9.83□□□□□ -0.84
NUP43-201ENST00000340413 ADGRL3Q9HAR2 1447 aa9.83□□□□□ -0.84
NUP43-201ENST00000340413 CD163L1Q9NR16 1453 aa9.83□□□□□ -0.84
NUP43-201ENST00000340413 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
NUP43-201ENST00000340413 CGNL1Q0VF96 1302 aa9.82□□□□□ -0.84
NUP43-201ENST00000340413 MYBBP1AQ9BQG0 1328 aaKnown RBP9.82□□□□□ -0.84
NUP43-201ENST00000340413 ROBO2Q9HCK4 1378 aa9.82□□□□□ -0.84
NUP43-201ENST00000340413 TRAK1Q9UPV9 953 aa9.82□□□□□ -0.84
NUP43-201ENST00000340413 EDC4Q6P2E9 1401 aaKnown RBP9.81□□□□□ -0.84
NUP43-201ENST00000340413 KCNA6P17658 529 aa9.81□□□□□ -0.84
NUP43-201ENST00000340413 MIER1Q8N108 512 aa9.81□□□□□ -0.84
NUP43-201ENST00000340413 PRAM1Q96QH2 718 aa9.81□□□□□ -0.84
NUP43-201ENST00000340413 POGKQ9P215 609 aa9.81□□□□□ -0.84
NUP43-201ENST00000340413 WASLO00401 505 aaPredicted RBP9.8□□□□□ -0.84
NUP43-201ENST00000340413 POLR3AO14802 1390 aaPredicted RBP9.8□□□□□ -0.84
NUP43-201ENST00000340413 TMEM132EQ6IEE7 984 aa9.8□□□□□ -0.84
NUP43-201ENST00000340413 TERF2IPQ9NYB0 399 aa9.8□□□□□ -0.84
NUP43-201ENST00000340413 SMG6Q86US8 1419 aaKnown RBP9.79□□□□□ -0.84
NUP43-201ENST00000340413 NCBP3Q53F19 620 aaKnown RBP9.79□□□□□ -0.84
NUP43-201ENST00000340413 PHRF1Q9P1Y6 1649 aaKnown RBP9.79□□□□□ -0.84
NUP43-201ENST00000340413 PLEKHG3A1L390 1219 aa9.79□□□□□ -0.84
NUP43-201ENST00000340413 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
NUP43-201ENST00000340413 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
NUP43-201ENST00000340413 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
NUP43-201ENST00000340413 KNSTRNQ9Y448 316 aa9.78□□□□□ -0.84
NUP43-201ENST00000340413 NLRP13Q86W25 1043 aa9.77□□□□□ -0.85
NUP43-201ENST00000340413 PANK3Q9H999 370 aa9.77□□□□□ -0.85
NUP43-201ENST00000340413 ABCC6O95255 1503 aa9.77□□□□□ -0.85
NUP43-201ENST00000340413 HIRIP3Q9BW71 556 aaPredicted RBP9.77□□□□□ -0.85
NUP43-201ENST00000340413 STRCP1A6NGW2 1772 aa9.77□□□□□ -0.85
NUP43-201ENST00000340413 AMOTL2Q9Y2J4 779 aa9.77□□□□□ -0.85
NUP43-201ENST00000340413 SSH2Q76I76 1423 aa9.77□□□□□ -0.85
NUP43-201ENST00000340413 PLEKHH1Q9ULM0 1364 aa9.76□□□□□ -0.85
NUP43-201ENST00000340413 HDGFL2Q7Z4V5 671 aaPredicted RBP9.76□□□□□ -0.85
NUP43-201ENST00000340413 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
NUP43-201ENST00000340413 PPIP5K1Q6PFW1 1433 aa9.76□□□□□ -0.85
NUP43-201ENST00000340413 NSD3Q9BZ95 1437 aa9.76□□□□□ -0.85
NUP43-201ENST00000340413 CDK19Q9BWU1 502 aa9.76□□□□□ -0.85
NUP43-201ENST00000340413 XIRP1Q702N8 1843 aaKnown RBP9.76□□□□□ -0.85
NUP43-201ENST00000340413 AATKQ6ZMQ8 1374 aa9.76□□□□□ -0.85
NUP43-201ENST00000340413 NGEFQ8N5V2 710 aa9.76□□□□□ -0.85
NUP43-201ENST00000340413 USP31Q70CQ4 1352 aa9.75□□□□□ -0.85
NUP43-201ENST00000340413 IQSEC2Q5JU85 1478 aa9.75□□□□□ -0.85
NUP43-201ENST00000340413 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
NUP43-201ENST00000340413 KIF24Q5T7B8 1368 aa9.75□□□□□ -0.85
NUP43-201ENST00000340413 A0A1W2PP64 1363 aa9.75□□□□□ -0.85
NUP43-201ENST00000340413 CCDC61Q9Y6R9 512 aa9.74□□□□□ -0.85
NUP43-201ENST00000340413 BLMP54132 1417 aaPredicted RBP9.74□□□□□ -0.85
NUP43-201ENST00000340413 SHPRHQ149N8 1683 aa9.74□□□□□ -0.85
NUP43-201ENST00000340413 TRPM3Q9HCF6 1732 aaPredicted RBP9.74□□□□□ -0.85
NUP43-201ENST00000340413 NUTM2DQ5VT03 806 aaPredicted RBP9.73□□□□□ -0.85
NUP43-201ENST00000340413 MARF1Q9Y4F3 1742 aaKnown RBP9.73□□□□□ -0.85
NUP43-201ENST00000340413 MED1Q15648 1581 aaPredicted RBP9.73□□□□□ -0.85
NUP43-201ENST00000340413 USP6P35125 1406 aa9.72□□□□□ -0.85
NUP43-201ENST00000340413 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
NUP43-201ENST00000340413 STK26Q9P289 416 aa9.72□□□□□ -0.85
NUP43-201ENST00000340413 CENPBP07199 599 aaPredicted RBP9.71□□□□□ -0.85
NUP43-201ENST00000340413 CDK12Q9NYV4 1490 aaPredicted RBP9.71□□□□□ -0.85
NUP43-201ENST00000340413 SRPK2P78362 688 aaKnown RBP9.71□□□□□ -0.86
NUP43-201ENST00000340413 NUDT16Q96DE0 195 aaKnown RBP9.71□□□□□ -0.86
NUP43-201ENST00000340413 MINK1Q8N4C8 1332 aaPredicted RBP9.71□□□□□ -0.86
NUP43-201ENST00000340413 RGPD8O14715 1765 aaPredicted RBP9.71□□□□□ -0.86
NUP43-201ENST00000340413 BCANQ96GW7 911 aa9.71□□□□□ -0.86
NUP43-201ENST00000340413 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
NUP43-201ENST00000340413 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
NUP43-201ENST00000340413 PLPPR3Q6T4P5 718 aa9.7□□□□□ -0.86
NUP43-201ENST00000340413 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
NUP43-201ENST00000340413 COL3A1P02461 1466 aaPredicted RBP9.7□□□□□ -0.86
NUP43-201ENST00000340413 ALS2Q96Q42 1657 aa9.7□□□□□ -0.86
NUP43-201ENST00000340413 PIK3C2AO00443 1686 aa9.7□□□□□ -0.86
NUP43-201ENST00000340413 SLIT3O75094 1523 aa9.7□□□□□ -0.86
NUP43-201ENST00000340413 PNPLA6Q8IY17 1366 aa9.7□□□□□ -0.86
NUP43-201ENST00000340413 WAPLQ7Z5K2 1190 aa9.69□□□□□ -0.86
NUP43-201ENST00000340413 SLC26A8Q96RN1 970 aa9.69□□□□□ -0.86
NUP43-201ENST00000340413 NHSL1Q5SYE7 1610 aa9.69□□□□□ -0.86
NUP43-201ENST00000340413 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms