RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.07■■□□□ 1.6
SDCBP2-201ENST00000339987 SAFB2Q14151 953 aaKnown RBP eCLIP25.07■■□□□ 1.6
SDCBP2-201ENST00000339987 HIRIP3Q9BW71 556 aaPredicted RBP25.07■■□□□ 1.6
SDCBP2-201ENST00000339987 ADGRB2O60241 1585 aa25.06■■□□□ 1.6
SDCBP2-201ENST00000339987 LTBP4Q8N2S1 1624 aa25.06■■□□□ 1.6
SDCBP2-201ENST00000339987 LRRC7Q96NW7 1537 aa25.05■■□□□ 1.6
SDCBP2-201ENST00000339987 TMEM94Q12767 1356 aa25.04■■□□□ 1.6
SDCBP2-201ENST00000339987 MINK1Q8N4C8 1332 aaPredicted RBP25.04■■□□□ 1.6
SDCBP2-201ENST00000339987 ADGRL3Q9HAR2 1447 aa25.03■■□□□ 1.6
SDCBP2-201ENST00000339987 NALCNQ8IZF0 1738 aa25.02■■□□□ 1.6
SDCBP2-201ENST00000339987 TMF1P82094 1093 aa25.01■■□□□ 1.59
SDCBP2-201ENST00000339987 TULP4Q9NRJ4 1543 aa25.01■■□□□ 1.59
SDCBP2-201ENST00000339987 XIRP1Q702N8 1843 aaKnown RBP25■■□□□ 1.59
SDCBP2-201ENST00000339987 EVC2Q86UK5 1308 aa24.99■■□□□ 1.59
SDCBP2-201ENST00000339987 CDC42BPGQ6DT37 1551 aa24.99■■□□□ 1.59
SDCBP2-201ENST00000339987 DISP3Q9P2K9 1392 aa24.98■■□□□ 1.59
SDCBP2-201ENST00000339987 RBM33Q96EV2 1170 aaKnown RBP24.98■■□□□ 1.59
SDCBP2-201ENST00000339987 ZNF316A6NFI3 1004 aaPredicted RBP24.96■■□□□ 1.59
SDCBP2-201ENST00000339987 WASLO00401 505 aaPredicted RBP24.96■■□□□ 1.59
SDCBP2-201ENST00000339987 CDCA8Q53HL2 280 aa24.95■■□□□ 1.59
SDCBP2-201ENST00000339987 C14orf37Q86TY3 774 aa24.95■■□□□ 1.59
SDCBP2-201ENST00000339987 PUS7Q96PZ0 661 aaKnown RBP24.95■■□□□ 1.59
SDCBP2-201ENST00000339987 C19orf44Q9H6X5 657 aa24.95■■□□□ 1.59
SDCBP2-201ENST00000339987 DCCP43146 1447 aa24.95■■□□□ 1.59
SDCBP2-201ENST00000339987 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
SDCBP2-201ENST00000339987 CDK19Q9BWU1 502 aa24.93■■□□□ 1.58
SDCBP2-201ENST00000339987 FMN2Q9NZ56 1722 aa24.92■■□□□ 1.58
SDCBP2-201ENST00000339987 MSH6P52701 1360 aa24.91■■□□□ 1.58
SDCBP2-201ENST00000339987 CCDC7Q96M83 1385 aa24.91■■□□□ 1.58
SDCBP2-201ENST00000339987 KIF7Q2M1P5 1343 aa24.91■■□□□ 1.58
SDCBP2-201ENST00000339987 SRPK2P78362 688 aaKnown RBP24.89■■□□□ 1.58
SDCBP2-201ENST00000339987 WASHC2AQ641Q2 1341 aa24.89■■□□□ 1.58
SDCBP2-201ENST00000339987 ATAD2Q6PL18 1390 aa24.88■■□□□ 1.57
SDCBP2-201ENST00000339987 ANKARQ7Z5J8 1434 aa24.88■■□□□ 1.57
SDCBP2-201ENST00000339987 CABP2Q9NPB3 220 aa24.87■■□□□ 1.57
SDCBP2-201ENST00000339987 ATP7BP35670 1465 aa24.87■■□□□ 1.57
SDCBP2-201ENST00000339987 ATF3P18847 181 aa24.86■■□□□ 1.57
SDCBP2-201ENST00000339987 CADPS2Q86UW7 1296 aa24.86■■□□□ 1.57
SDCBP2-201ENST00000339987 IQSEC2Q5JU85 1478 aa24.85■■□□□ 1.57
SDCBP2-201ENST00000339987 USP32Q8NFA0 1604 aa24.84■■□□□ 1.57
SDCBP2-201ENST00000339987 PRR36Q9H6K5 1346 aa24.84■■□□□ 1.57
SDCBP2-201ENST00000339987 NUDT16Q96DE0 195 aaKnown RBP24.83■■□□□ 1.57
SDCBP2-201ENST00000339987 TOPAZ1Q8N9V7 1692 aa24.82■■□□□ 1.56
SDCBP2-201ENST00000339987 MST1RQ04912 1400 aa24.82■■□□□ 1.56
SDCBP2-201ENST00000339987 NINLQ9Y2I6 1382 aa24.82■■□□□ 1.56
SDCBP2-201ENST00000339987 CCDC61Q9Y6R9 512 aa24.81■■□□□ 1.56
SDCBP2-201ENST00000339987 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
SDCBP2-201ENST00000339987 MYOM1P52179 1685 aa24.8■■□□□ 1.56
SDCBP2-201ENST00000339987 POLR3GLQ9BT43 218 aa24.8■■□□□ 1.56
SDCBP2-201ENST00000339987 C1orf167Q5SNV9 1468 aa24.79■■□□□ 1.56
SDCBP2-201ENST00000339987 NUTM2FA1L443 756 aa24.78■■□□□ 1.56
SDCBP2-201ENST00000339987 RGPD8O14715 1765 aaPredicted RBP24.77■■□□□ 1.56
SDCBP2-201ENST00000339987 PPIP5K1Q6PFW1 1433 aa24.77■■□□□ 1.56
SDCBP2-201ENST00000339987 CERKQ8TCT0 537 aa24.76■■□□□ 1.55
SDCBP2-201ENST00000339987 PLEKHG3A1L390 1219 aa24.74■■□□□ 1.55
SDCBP2-201ENST00000339987 TMC1Q8TDI8 760 aa24.73■■□□□ 1.55
SDCBP2-201ENST00000339987 SLC12A5Q9H2X9 1139 aa24.73■■□□□ 1.55
SDCBP2-201ENST00000339987 CABP1Q9NZU7 370 aa24.73■■□□□ 1.55
SDCBP2-201ENST00000339987 SLAIN2Q9P270 581 aa24.72■■□□□ 1.55
SDCBP2-201ENST00000339987 KIF1AQ12756 1690 aa24.71■■□□□ 1.55
SDCBP2-201ENST00000339987 ANKRD36BQ8N2N9 1353 aa24.7■■□□□ 1.54
SDCBP2-201ENST00000339987 CD163L1Q9NR16 1453 aa24.7■■□□□ 1.54
SDCBP2-201ENST00000339987 PHF8Q9UPP1 1060 aa24.69■■□□□ 1.54
SDCBP2-201ENST00000339987 POLR3AO14802 1390 aaPredicted RBP24.69■■□□□ 1.54
SDCBP2-201ENST00000339987 ESCO1Q5FWF5 840 aa24.69■■□□□ 1.54
SDCBP2-201ENST00000339987 CPSF1Q10570 1443 aaKnown RBP24.68■■□□□ 1.54
SDCBP2-201ENST00000339987 ORAI2Q96SN7 254 aa24.68■■□□□ 1.54
SDCBP2-201ENST00000339987 TERF2IPQ9NYB0 399 aa24.68■■□□□ 1.54
SDCBP2-201ENST00000339987 DDX10Q13206 875 aaKnown RBP24.67■■□□□ 1.54
SDCBP2-201ENST00000339987 AKAP12Q02952 1782 aa24.66■■□□□ 1.54
SDCBP2-201ENST00000339987 TOM1O60784 492 aa24.66■■□□□ 1.54
SDCBP2-201ENST00000339987 HDGFL2Q7Z4V5 671 aaPredicted RBP24.66■■□□□ 1.54
SDCBP2-201ENST00000339987 PANK3Q9H999 370 aa24.66■■□□□ 1.54
SDCBP2-201ENST00000339987 ACEP12821 1306 aa24.66■■□□□ 1.54
SDCBP2-201ENST00000339987 A0A1W2PP64 1363 aa24.66■■□□□ 1.54
SDCBP2-201ENST00000339987 PMFBP1Q8TBY8 1022 aa24.65■■□□□ 1.54
SDCBP2-201ENST00000339987 ZNF692Q9BU19 519 aaPredicted RBP24.64■■□□□ 1.54
SDCBP2-201ENST00000339987 BRINP3Q76B58 766 aa24.63■■□□□ 1.53
SDCBP2-201ENST00000339987 NGDNQ8NEJ9 315 aaKnown RBP24.63■■□□□ 1.53
SDCBP2-201ENST00000339987 MON2Q7Z3U7 1717 aa24.63■■□□□ 1.53
SDCBP2-201ENST00000339987 UBAP1LF5GYI3 381 aa24.61■■□□□ 1.53
SDCBP2-201ENST00000339987 USP6P35125 1406 aa24.6■■□□□ 1.53
SDCBP2-201ENST00000339987 KTN1Q86UP2 1357 aaKnown RBP24.6■■□□□ 1.53
SDCBP2-201ENST00000339987 CARD14Q9BXL6 1004 aa24.6■■□□□ 1.53
SDCBP2-201ENST00000339987 BRD4O60885 1362 aaPredicted RBP24.59■■□□□ 1.53
SDCBP2-201ENST00000339987 ROBO1Q9Y6N7 1651 aa24.59■■□□□ 1.53
SDCBP2-201ENST00000339987 EDC4Q6P2E9 1401 aaKnown RBP24.59■■□□□ 1.53
SDCBP2-201ENST00000339987 NSD3Q9BZ95 1437 aa24.58■■□□□ 1.52
SDCBP2-201ENST00000339987 NRKQ7Z2Y5 1582 aa24.58■■□□□ 1.52
SDCBP2-201ENST00000339987 NPHP3Q7Z494 1330 aa24.57■■□□□ 1.52
SDCBP2-201ENST00000339987 PER1O15534 1290 aaPredicted RBP24.57■■□□□ 1.52
SDCBP2-201ENST00000339987 FOXO3O43524 673 aa24.57■■□□□ 1.52
SDCBP2-201ENST00000339987 ILDR2Q71H61 639 aa24.57■■□□□ 1.52
SDCBP2-201ENST00000339987 SSH2Q76I76 1423 aa24.57■■□□□ 1.52
SDCBP2-201ENST00000339987 NHSL1Q5SYE7 1610 aa24.56■■□□□ 1.52
SDCBP2-201ENST00000339987 PSME1Q06323 249 aa24.54■■□□□ 1.52
SDCBP2-201ENST00000339987 KNSTRNQ9Y448 316 aa24.53■■□□□ 1.52
SDCBP2-201ENST00000339987 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
SDCBP2-201ENST00000339987 PXDNQ92626 1479 aa24.53■■□□□ 1.52
SDCBP2-201ENST00000339987 TRPM3Q9HCF6 1732 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms