RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 PIK3R4Q99570 1358 aa17.99■□□□□ 0.47
PRIM1-201ENST00000338193 ROBO2Q9HCK4 1378 aa17.99■□□□□ 0.47
PRIM1-201ENST00000338193 ARHGEF28Q8N1W1 1705 aaKnown RBP17.98■□□□□ 0.47
PRIM1-201ENST00000338193 PLEKHH1Q9ULM0 1364 aa17.98■□□□□ 0.47
PRIM1-201ENST00000338193 CPS1P31327 1500 aa17.98■□□□□ 0.47
PRIM1-201ENST00000338193 LRRC7Q96NW7 1537 aa17.97■□□□□ 0.47
PRIM1-201ENST00000338193 ROCK2O75116 1388 aaKnown RBP17.96■□□□□ 0.47
PRIM1-201ENST00000338193 TECPR2O15040 1411 aa17.95■□□□□ 0.46
PRIM1-201ENST00000338193 GPRASP1Q5JY77 1395 aa17.95■□□□□ 0.46
PRIM1-201ENST00000338193 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
PRIM1-201ENST00000338193 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
PRIM1-201ENST00000338193 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.94■□□□□ 0.46
PRIM1-201ENST00000338193 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
PRIM1-201ENST00000338193 NALCNQ8IZF0 1738 aa17.94■□□□□ 0.46
PRIM1-201ENST00000338193 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
PRIM1-201ENST00000338193 SP7Q8TDD2 431 aaPredicted RBP17.92■□□□□ 0.46
PRIM1-201ENST00000338193 PTCH1Q13635 1447 aa17.92■□□□□ 0.46
PRIM1-201ENST00000338193 DLC1Q96QB1 1528 aa17.92■□□□□ 0.46
PRIM1-201ENST00000338193 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
PRIM1-201ENST00000338193 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
PRIM1-201ENST00000338193 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
PRIM1-201ENST00000338193 PRAM1Q96QH2 718 aa17.9■□□□□ 0.46
PRIM1-201ENST00000338193 CARD11Q9BXL7 1154 aa17.9■□□□□ 0.46
PRIM1-201ENST00000338193 QRICH2Q9H0J4 1663 aa17.88■□□□□ 0.45
PRIM1-201ENST00000338193 FAM135BQ49AJ0 1406 aa17.87■□□□□ 0.45
PRIM1-201ENST00000338193 AKT1S1Q96B36 256 aa17.85■□□□□ 0.45
PRIM1-201ENST00000338193 USP47Q96K76 1375 aa17.83■□□□□ 0.45
PRIM1-201ENST00000338193 HIRIP3Q9BW71 556 aaPredicted RBP17.83■□□□□ 0.45
PRIM1-201ENST00000338193 ADGRL3Q9HAR2 1447 aa17.83■□□□□ 0.44
PRIM1-201ENST00000338193 CERKQ8TCT0 537 aa17.82■□□□□ 0.44
PRIM1-201ENST00000338193 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
PRIM1-201ENST00000338193 MINK1Q8N4C8 1332 aaPredicted RBP17.82■□□□□ 0.44
PRIM1-201ENST00000338193 POGKQ9P215 609 aa17.81■□□□□ 0.44
PRIM1-201ENST00000338193 ADGRB2O60241 1585 aa17.81■□□□□ 0.44
PRIM1-201ENST00000338193 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
PRIM1-201ENST00000338193 TULP4Q9NRJ4 1543 aa17.8■□□□□ 0.44
PRIM1-201ENST00000338193 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
PRIM1-201ENST00000338193 FMN2Q9NZ56 1722 aa17.79■□□□□ 0.44
PRIM1-201ENST00000338193 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
PRIM1-201ENST00000338193 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
PRIM1-201ENST00000338193 USP32Q8NFA0 1604 aa17.78■□□□□ 0.44
PRIM1-201ENST00000338193 C14orf37Q86TY3 774 aa17.78■□□□□ 0.44
PRIM1-201ENST00000338193 TESK2Q96S53 571 aa17.78■□□□□ 0.44
PRIM1-201ENST00000338193 NCOA3Q9Y6Q9 1424 aa17.77■□□□□ 0.44
PRIM1-201ENST00000338193 RGPD8O14715 1765 aaPredicted RBP17.77■□□□□ 0.44
PRIM1-201ENST00000338193 NUTM2FA1L443 756 aa17.76■□□□□ 0.43
PRIM1-201ENST00000338193 MSH6P52701 1360 aa17.76■□□□□ 0.43
PRIM1-201ENST00000338193 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
PRIM1-201ENST00000338193 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
PRIM1-201ENST00000338193 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
PRIM1-201ENST00000338193 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
PRIM1-201ENST00000338193 MST1RQ04912 1400 aa17.73■□□□□ 0.43
PRIM1-201ENST00000338193 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
PRIM1-201ENST00000338193 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
PRIM1-201ENST00000338193 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
PRIM1-201ENST00000338193 DCCP43146 1447 aa17.71■□□□□ 0.43
PRIM1-201ENST00000338193 ZBTB12Q9Y330 459 aaPredicted RBP17.71■□□□□ 0.43
PRIM1-201ENST00000338193 SBNO2Q9Y2G9 1366 aa17.7■□□□□ 0.42
PRIM1-201ENST00000338193 WASLO00401 505 aaPredicted RBP17.7■□□□□ 0.42
PRIM1-201ENST00000338193 CDK19Q9BWU1 502 aa17.7■□□□□ 0.42
PRIM1-201ENST00000338193 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
PRIM1-201ENST00000338193 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
PRIM1-201ENST00000338193 ATP7BP35670 1465 aa17.69■□□□□ 0.42
PRIM1-201ENST00000338193 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
PRIM1-201ENST00000338193 TOPAZ1Q8N9V7 1692 aa17.69■□□□□ 0.42
PRIM1-201ENST00000338193 ATF3P18847 181 aa17.68■□□□□ 0.42
PRIM1-201ENST00000338193 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
PRIM1-201ENST00000338193 UBAP1LF5GYI3 381 aa17.67■□□□□ 0.42
PRIM1-201ENST00000338193 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
PRIM1-201ENST00000338193 ORAI2Q96SN7 254 aa17.67■□□□□ 0.42
PRIM1-201ENST00000338193 ROBO1Q9Y6N7 1651 aa17.67■□□□□ 0.42
PRIM1-201ENST00000338193 CADPS2Q86UW7 1296 aa17.66■□□□□ 0.42
PRIM1-201ENST00000338193 SLAIN2Q9P270 581 aa17.66■□□□□ 0.42
PRIM1-201ENST00000338193 PIP4K2BP78356 416 aa17.65■□□□□ 0.42
PRIM1-201ENST00000338193 MYOM1P52179 1685 aa17.64■□□□□ 0.41
PRIM1-201ENST00000338193 SRPK2P78362 688 aaKnown RBP17.64■□□□□ 0.41
PRIM1-201ENST00000338193 DDX17Q92841 729 aaKnown RBP17.64■□□□□ 0.41
PRIM1-201ENST00000338193 EVC2Q86UK5 1308 aa17.63■□□□□ 0.41
PRIM1-201ENST00000338193 NUDT16Q96DE0 195 aaKnown RBP17.63■□□□□ 0.41
PRIM1-201ENST00000338193 ANKARQ7Z5J8 1434 aa17.62■□□□□ 0.41
PRIM1-201ENST00000338193 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
PRIM1-201ENST00000338193 ATF5Q9Y2D1 282 aaPredicted RBP17.62■□□□□ 0.41
PRIM1-201ENST00000338193 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
PRIM1-201ENST00000338193 TOM1O60784 492 aa17.61■□□□□ 0.41
PRIM1-201ENST00000338193 ESCO1Q5FWF5 840 aa17.6■□□□□ 0.41
PRIM1-201ENST00000338193 PMFBP1Q8TBY8 1022 aa17.6■□□□□ 0.41
PRIM1-201ENST00000338193 NHSL1Q5SYE7 1610 aa17.59■□□□□ 0.41
PRIM1-201ENST00000338193 TMF1P82094 1093 aa17.59■□□□□ 0.41
PRIM1-201ENST00000338193 PPIP5K1Q6PFW1 1433 aa17.59■□□□□ 0.41
PRIM1-201ENST00000338193 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.4
PRIM1-201ENST00000338193 KIF1AQ12756 1690 aa17.58■□□□□ 0.4
PRIM1-201ENST00000338193 CABP1Q9NZU7 370 aa17.57■□□□□ 0.4
PRIM1-201ENST00000338193 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
PRIM1-201ENST00000338193 XPCQ01831 940 aaPredicted RBP17.56■□□□□ 0.4
PRIM1-201ENST00000338193 SLC12A5Q9H2X9 1139 aa17.56■□□□□ 0.4
PRIM1-201ENST00000338193 POLR3GLQ9BT43 218 aa17.55■□□□□ 0.4
PRIM1-201ENST00000338193 PHF8Q9UPP1 1060 aa17.55■□□□□ 0.4
PRIM1-201ENST00000338193 WASHC2AQ641Q2 1341 aa17.55■□□□□ 0.4
PRIM1-201ENST00000338193 AKAP12Q02952 1782 aa17.55■□□□□ 0.4
PRIM1-201ENST00000338193 FOXO3O43524 673 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms