RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 IQSEC2Q5JU85 1478 aa18.67■□□□□ 0.58
LIPA-202ENST00000336233 E9PSI1 815 aa18.67■□□□□ 0.58
LIPA-202ENST00000336233 APAF1O14727 1248 aa18.67■□□□□ 0.58
LIPA-202ENST00000336233 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
LIPA-202ENST00000336233 C20orf194Q5TEA3 1177 aa18.66■□□□□ 0.58
LIPA-202ENST00000336233 ANKRD36BQ8N2N9 1353 aa18.66■□□□□ 0.58
LIPA-202ENST00000336233 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
LIPA-202ENST00000336233 TMEM132EQ6IEE7 984 aa18.65■□□□□ 0.58
LIPA-202ENST00000336233 SLC52A1Q9NWF4 448 aa18.65■□□□□ 0.58
LIPA-202ENST00000336233 BACH2Q9BYV9 841 aa18.64■□□□□ 0.58
LIPA-202ENST00000336233 EVC2Q86UK5 1308 aa18.64■□□□□ 0.58
LIPA-202ENST00000336233 MORC1Q86VD1 984 aa18.64■□□□□ 0.57
LIPA-202ENST00000336233 SLC12A5Q9H2X9 1139 aa18.64■□□□□ 0.57
LIPA-202ENST00000336233 MYO5BQ9ULV0 1848 aa18.64■□□□□ 0.57
LIPA-202ENST00000336233 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
LIPA-202ENST00000336233 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
LIPA-202ENST00000336233 PDE4AP27815 886 aa18.64■□□□□ 0.57
LIPA-202ENST00000336233 CGNL1Q0VF96 1302 aa18.63■□□□□ 0.57
LIPA-202ENST00000336233 REREQ9P2R6 1566 aa18.63■□□□□ 0.57
LIPA-202ENST00000336233 CENPQQ7L2Z9 268 aaPredicted RBP18.62■□□□□ 0.57
LIPA-202ENST00000336233 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
LIPA-202ENST00000336233 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
LIPA-202ENST00000336233 IDI1Q13907 227 aa18.6■□□□□ 0.57
LIPA-202ENST00000336233 PTPRMP28827 1452 aa18.6■□□□□ 0.57
LIPA-202ENST00000336233 PHF23Q9BUL5 403 aaPredicted RBP18.59■□□□□ 0.57
LIPA-202ENST00000336233 ANKRD26Q9UPS8 1709 aa18.59■□□□□ 0.57
LIPA-202ENST00000336233 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
LIPA-202ENST00000336233 WWC1Q8IX03 1113 aa18.58■□□□□ 0.56
LIPA-202ENST00000336233 RUNDC1Q96C34 613 aa18.58■□□□□ 0.56
LIPA-202ENST00000336233 ADGRB2O60241 1585 aa18.58■□□□□ 0.56
LIPA-202ENST00000336233 AGLP35573 1532 aa18.57■□□□□ 0.56
LIPA-202ENST00000336233 ABCC11Q96J66 1382 aa18.56■□□□□ 0.56
LIPA-202ENST00000336233 UBE2Q2Q8WVN8 375 aa18.56■□□□□ 0.56
LIPA-202ENST00000336233 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
LIPA-202ENST00000336233 DIP2BQ9P265 1576 aa18.56■□□□□ 0.56
LIPA-202ENST00000336233 MED14O60244 1454 aa18.56■□□□□ 0.56
LIPA-202ENST00000336233 EIF5BO60841 1220 aaKnown RBP18.55■□□□□ 0.56
LIPA-202ENST00000336233 CCDC27Q2M243 656 aa18.55■□□□□ 0.56
LIPA-202ENST00000336233 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
LIPA-202ENST00000336233 ZBTB47Q9UFB7 747 aaPredicted RBP18.54■□□□□ 0.56
LIPA-202ENST00000336233 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
LIPA-202ENST00000336233 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
LIPA-202ENST00000336233 ATAD2Q6PL18 1390 aa18.53■□□□□ 0.56
LIPA-202ENST00000336233 MTHFSP49914 203 aa18.53■□□□□ 0.56
LIPA-202ENST00000336233 YTHDC2Q9H6S0 1430 aaKnown RBP18.52■□□□□ 0.56
LIPA-202ENST00000336233 ALKQ9UM73 1620 aa18.52■□□□□ 0.56
LIPA-202ENST00000336233 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.55
LIPA-202ENST00000336233 A0A1W2PP64 1363 aa18.52■□□□□ 0.55
LIPA-202ENST00000336233 BCAR3O75815 825 aa18.51■□□□□ 0.55
LIPA-202ENST00000336233 COL3A1P02461 1466 aaPredicted RBP18.51■□□□□ 0.55
LIPA-202ENST00000336233 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
LIPA-202ENST00000336233 TCP11L2Q8N4U5 519 aa18.5■□□□□ 0.55
LIPA-202ENST00000336233 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
LIPA-202ENST00000336233 CD163L1Q9NR16 1453 aa18.5■□□□□ 0.55
LIPA-202ENST00000336233 CABP2Q9NPB3 220 aa18.5■□□□□ 0.55
LIPA-202ENST00000336233 NLRP1Q9C000 1473 aa18.5■□□□□ 0.55
LIPA-202ENST00000336233 SPATA31D1Q6ZQQ2 1576 aa18.49■□□□□ 0.55
LIPA-202ENST00000336233 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
LIPA-202ENST00000336233 SETD1AO15047 1707 aaKnown RBP18.48■□□□□ 0.55
LIPA-202ENST00000336233 RIMBP3CA6NJZ7 1639 aa18.48■□□□□ 0.55
LIPA-202ENST00000336233 RIMBP3BA6NNM3 1639 aa18.48■□□□□ 0.55
LIPA-202ENST00000336233 RIMBP3Q9UFD9 1639 aa18.48■□□□□ 0.55
LIPA-202ENST00000336233 ARHGEF40Q8TER5 1519 aa18.47■□□□□ 0.55
LIPA-202ENST00000336233 AAMPQ13685 434 aa18.47■□□□□ 0.55
LIPA-202ENST00000336233 KIF20BQ96Q89 1820 aa18.46■□□□□ 0.55
LIPA-202ENST00000336233 SKAP1Q86WV1 359 aa18.46■□□□□ 0.55
LIPA-202ENST00000336233 VIRMAQ69YN4 1812 aaKnown RBP18.45■□□□□ 0.54
LIPA-202ENST00000336233 RARSP54136 660 aaKnown RBP18.44■□□□□ 0.54
LIPA-202ENST00000336233 NPM2Q86SE8 214 aaKnown RBP18.44■□□□□ 0.54
LIPA-202ENST00000336233 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
LIPA-202ENST00000336233 A2ML1A8K2U0 1454 aa18.44■□□□□ 0.54
LIPA-202ENST00000336233 FAM161AQ3B820 660 aa18.43■□□□□ 0.54
LIPA-202ENST00000336233 CDC42BPGQ6DT37 1551 aa18.43■□□□□ 0.54
LIPA-202ENST00000336233 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
LIPA-202ENST00000336233 DDRGK1Q96HY6 314 aa18.43■□□□□ 0.54
LIPA-202ENST00000336233 PRAM1Q96QH2 718 aa18.43■□□□□ 0.54
LIPA-202ENST00000336233 STK26Q9P289 416 aa18.43■□□□□ 0.54
LIPA-202ENST00000336233 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
LIPA-202ENST00000336233 FBXO31Q5XUX0 539 aaPredicted RBP18.42■□□□□ 0.54
LIPA-202ENST00000336233 MYH16Q9H6N6 1097 aa18.42■□□□□ 0.54
LIPA-202ENST00000336233 C8orf34Q49A92 452 aa18.41■□□□□ 0.54
LIPA-202ENST00000336233 CLUAP1Q96AJ1 413 aa18.41■□□□□ 0.54
LIPA-202ENST00000336233 SAFB2Q14151 953 aaKnown RBP eCLIP18.4■□□□□ 0.54
LIPA-202ENST00000336233 PNPLA6Q8IY17 1366 aa18.4■□□□□ 0.54
LIPA-202ENST00000336233 ATP7BP35670 1465 aa18.4■□□□□ 0.54
LIPA-202ENST00000336233 CT47B1P0C2W7 299 aaPredicted RBP18.4■□□□□ 0.54
LIPA-202ENST00000336233 U2AF1L5P0DN76 240 aaPredicted RBP18.4■□□□□ 0.54
LIPA-202ENST00000336233 U2AF1Q01081 240 aaKnown RBP eCLIP18.4■□□□□ 0.54
LIPA-202ENST00000336233 MINK1Q8N4C8 1332 aaPredicted RBP18.39■□□□□ 0.53
LIPA-202ENST00000336233 FAM69CQ0P6D2 419 aa18.39■□□□□ 0.53
LIPA-202ENST00000336233 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
LIPA-202ENST00000336233 PLEKHF1Q96S99 279 aa18.39■□□□□ 0.53
LIPA-202ENST00000336233 POGKQ9P215 609 aa18.39■□□□□ 0.53
LIPA-202ENST00000336233 FYB1O15117 783 aa18.39■□□□□ 0.53
LIPA-202ENST00000336233 NEUROD2Q15784 382 aa18.39■□□□□ 0.53
LIPA-202ENST00000336233 TSPOAP1O95153 1857 aa18.39■□□□□ 0.53
LIPA-202ENST00000336233 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
LIPA-202ENST00000336233 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
LIPA-202ENST00000336233 NRXN3Q9Y4C0 1643 aa18.37■□□□□ 0.53
LIPA-202ENST00000336233 ZMYM3Q14202 1370 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms