RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PAK3O75914 559 aaPredicted RBP23.15■■□□□ 1.3
LRCH3-201ENST00000334859 PDE4AP27815 886 aa23.15■■□□□ 1.3
LRCH3-201ENST00000334859 TULP4Q9NRJ4 1543 aa23.14■■□□□ 1.3
LRCH3-201ENST00000334859 CGNL1Q0VF96 1302 aa23.14■■□□□ 1.3
LRCH3-201ENST00000334859 IDI1Q13907 227 aa23.14■■□□□ 1.29
LRCH3-201ENST00000334859 USP32Q8NFA0 1604 aa23.14■■□□□ 1.29
LRCH3-201ENST00000334859 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
LRCH3-201ENST00000334859 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
LRCH3-201ENST00000334859 NGEFQ8N5V2 710 aa23.13■■□□□ 1.29
LRCH3-201ENST00000334859 SAFB2Q14151 953 aaKnown RBP eCLIP23.12■■□□□ 1.29
LRCH3-201ENST00000334859 SKAP1Q86WV1 359 aa23.12■■□□□ 1.29
LRCH3-201ENST00000334859 DMRT2Q9Y5R5 561 aa23.12■■□□□ 1.29
LRCH3-201ENST00000334859 BACH2Q9BYV9 841 aa23.1■■□□□ 1.29
LRCH3-201ENST00000334859 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
LRCH3-201ENST00000334859 MYO5BQ9ULV0 1848 aa23.09■■□□□ 1.29
LRCH3-201ENST00000334859 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
LRCH3-201ENST00000334859 CABP2Q9NPB3 220 aa23.08■■□□□ 1.29
LRCH3-201ENST00000334859 STK26Q9P289 416 aa23.08■■□□□ 1.29
LRCH3-201ENST00000334859 ANKRD36BQ8N2N9 1353 aa23.08■■□□□ 1.29
LRCH3-201ENST00000334859 PREX1Q8TCU6 1659 aa23.08■■□□□ 1.29
LRCH3-201ENST00000334859 ZBTB47Q9UFB7 747 aaPredicted RBP23.08■■□□□ 1.29
LRCH3-201ENST00000334859 BCAR3O75815 825 aa23.07■■□□□ 1.28
LRCH3-201ENST00000334859 CENPQQ7L2Z9 268 aaPredicted RBP23.07■■□□□ 1.28
LRCH3-201ENST00000334859 WWC1Q8IX03 1113 aa23.07■■□□□ 1.28
LRCH3-201ENST00000334859 MTHFSP49914 203 aa23.07■■□□□ 1.28
LRCH3-201ENST00000334859 NEUROD2Q15784 382 aa23.07■■□□□ 1.28
LRCH3-201ENST00000334859 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
LRCH3-201ENST00000334859 ZFYVE9O95405 1425 aa23.06■■□□□ 1.28
LRCH3-201ENST00000334859 PUS7Q96PZ0 661 aaKnown RBP23.06■■□□□ 1.28
LRCH3-201ENST00000334859 RRP7AQ9Y3A4 280 aaKnown RBP23.06■■□□□ 1.28
LRCH3-201ENST00000334859 CYB5RLQ6IPT4 315 aa23.05■■□□□ 1.28
LRCH3-201ENST00000334859 RUNDC1Q96C34 613 aa23.05■■□□□ 1.28
LRCH3-201ENST00000334859 TMEM131LA2VDJ0 1609 aa23.04■■□□□ 1.28
LRCH3-201ENST00000334859 NSD2O96028 1365 aa23.03■■□□□ 1.28
LRCH3-201ENST00000334859 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
LRCH3-201ENST00000334859 IQSEC2Q5JU85 1478 aa23.02■■□□□ 1.28
LRCH3-201ENST00000334859 TCP11L2Q8N4U5 519 aa23.02■■□□□ 1.28
LRCH3-201ENST00000334859 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
LRCH3-201ENST00000334859 NBR1Q14596 966 aa23■■□□□ 1.27
LRCH3-201ENST00000334859 A0A1W2PP64 1363 aa23■■□□□ 1.27
LRCH3-201ENST00000334859 FBXO31Q5XUX0 539 aaPredicted RBP22.98■■□□□ 1.27
LRCH3-201ENST00000334859 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
LRCH3-201ENST00000334859 PTPRMP28827 1452 aa22.98■■□□□ 1.27
LRCH3-201ENST00000334859 NINLQ9Y2I6 1382 aa22.98■■□□□ 1.27
LRCH3-201ENST00000334859 PRAM1Q96QH2 718 aa22.97■■□□□ 1.27
LRCH3-201ENST00000334859 POGKQ9P215 609 aa22.97■■□□□ 1.27
LRCH3-201ENST00000334859 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
LRCH3-201ENST00000334859 ABCC11Q96J66 1382 aa22.96■■□□□ 1.27
LRCH3-201ENST00000334859 YTHDC2Q9H6S0 1430 aaKnown RBP22.96■■□□□ 1.27
LRCH3-201ENST00000334859 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
LRCH3-201ENST00000334859 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.272e-6■■■□□ 16.5
LRCH3-201ENST00000334859 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
LRCH3-201ENST00000334859 ATAD2Q6PL18 1390 aa22.94■■□□□ 1.26
LRCH3-201ENST00000334859 TSPOAP1O95153 1857 aa22.93■■□□□ 1.26
LRCH3-201ENST00000334859 PDE3AQ14432 1141 aa22.93■■□□□ 1.26
LRCH3-201ENST00000334859 GGNBP2Q9H3C7 697 aa22.93■■□□□ 1.26
LRCH3-201ENST00000334859 FRAT1Q92837 279 aaPredicted RBP22.92■■□□□ 1.26
LRCH3-201ENST00000334859 PHF23Q9BUL5 403 aaPredicted RBP22.92■■□□□ 1.26
LRCH3-201ENST00000334859 DIP2BQ9P265 1576 aa22.92■■□□□ 1.26
LRCH3-201ENST00000334859 WDR63Q8IWG1 891 aa22.92■■□□□ 1.26
LRCH3-201ENST00000334859 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
LRCH3-201ENST00000334859 RGS3P49796 1198 aa22.91■■□□□ 1.26
LRCH3-201ENST00000334859 PANK1Q8TE04 598 aa22.91■■□□□ 1.26
LRCH3-201ENST00000334859 ALKQ9UM73 1620 aa22.91■■□□□ 1.26
LRCH3-201ENST00000334859 CLTCQ00610 1675 aaKnown RBP22.9■■□□□ 1.26
LRCH3-201ENST00000334859 COG6Q9Y2V7 657 aa22.89■■□□□ 1.26
LRCH3-201ENST00000334859 CCDC27Q2M243 656 aa22.89■■□□□ 1.25
LRCH3-201ENST00000334859 RARSP54136 660 aaKnown RBP22.88■■□□□ 1.25
LRCH3-201ENST00000334859 U2SURPO15042 1029 aaKnown RBP22.88■■□□□ 1.25
LRCH3-201ENST00000334859 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
LRCH3-201ENST00000334859 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
LRCH3-201ENST00000334859 ADGRB2O60241 1585 aa22.87■■□□□ 1.25
LRCH3-201ENST00000334859 FAM161AQ3B820 660 aa22.87■■□□□ 1.25
LRCH3-201ENST00000334859 CLUAP1Q96AJ1 413 aa22.87■■□□□ 1.25
LRCH3-201ENST00000334859 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
LRCH3-201ENST00000334859 CD163L1Q9NR16 1453 aa22.86■■□□□ 1.25
LRCH3-201ENST00000334859 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
LRCH3-201ENST00000334859 MYH16Q9H6N6 1097 aa22.85■■□□□ 1.25
LRCH3-201ENST00000334859 ANKRD26Q9UPS8 1709 aa22.85■■□□□ 1.25
LRCH3-201ENST00000334859 HDGFL2Q7Z4V5 671 aaPredicted RBP22.84■■□□□ 1.25
LRCH3-201ENST00000334859 FYB1O15117 783 aa22.84■■□□□ 1.25
LRCH3-201ENST00000334859 IGHDP01880 384 aa22.84■■□□□ 1.25
LRCH3-201ENST00000334859 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
LRCH3-201ENST00000334859 REREQ9P2R6 1566 aa22.83■■□□□ 1.25
LRCH3-201ENST00000334859 DDRGK1Q96HY6 314 aa22.83■■□□□ 1.25
LRCH3-201ENST00000334859 C8orf34Q49A92 452 aa22.83■■□□□ 1.24
LRCH3-201ENST00000334859 RTL5Q5HYW3 569 aaPredicted RBP22.83■■□□□ 1.24
LRCH3-201ENST00000334859 COL3A1P02461 1466 aaPredicted RBP22.82■■□□□ 1.24
LRCH3-201ENST00000334859 AGLP35573 1532 aa22.82■■□□□ 1.24
LRCH3-201ENST00000334859 NLRP1Q9C000 1473 aa22.82■■□□□ 1.24
LRCH3-201ENST00000334859 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
LRCH3-201ENST00000334859 MLECQ14165 292 aa22.82■■□□□ 1.24
LRCH3-201ENST00000334859 ARHGEF40Q8TER5 1519 aa22.81■■□□□ 1.24
LRCH3-201ENST00000334859 MED14O60244 1454 aa22.81■■□□□ 1.24
LRCH3-201ENST00000334859 CABP1Q9NZU7 370 aa22.8■■□□□ 1.24
LRCH3-201ENST00000334859 NCBP3Q53F19 620 aaKnown RBP22.8■■□□□ 1.24
LRCH3-201ENST00000334859 A2ML1A8K2U0 1454 aa22.8■■□□□ 1.24
LRCH3-201ENST00000334859 LAS1LQ9Y4W2 734 aaKnown RBP22.79■■□□□ 1.24
LRCH3-201ENST00000334859 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
LRCH3-201ENST00000334859 TNNQ9UQP3 1299 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms