RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 PIP4K2BP78356 416 aa26.58■■□□□ 1.85
HLA-F-217ENST00000334668 C14orf37Q86TY3 774 aa26.57■■□□□ 1.84
HLA-F-217ENST00000334668 SIRT1Q96EB6 747 aa26.57■■□□□ 1.84
HLA-F-217ENST00000334668 STK26Q9P289 416 aa26.56■■□□□ 1.84
HLA-F-217ENST00000334668 FAM135BQ49AJ0 1406 aa26.56■■□□□ 1.84
HLA-F-217ENST00000334668 CADPS2Q86UW7 1296 aa26.55■■□□□ 1.84
HLA-F-217ENST00000334668 C1QBPQ07021 282 aaKnown RBP26.53■■□□□ 1.84
HLA-F-217ENST00000334668 SLAIN2Q9P270 581 aa26.53■■□□□ 1.84
HLA-F-217ENST00000334668 DLC1Q96QB1 1528 aa26.53■■□□□ 1.84
HLA-F-217ENST00000334668 ATF3P18847 181 aa26.51■■□□□ 1.83
HLA-F-217ENST00000334668 WAPLQ7Z5K2 1190 aa26.5■■□□□ 1.83
HLA-F-217ENST00000334668 ROBO1Q9Y6N7 1651 aa26.5■■□□□ 1.83
HLA-F-217ENST00000334668 PLEKHH1Q9ULM0 1364 aa26.48■■□□□ 1.83
HLA-F-217ENST00000334668 CLSPNQ9HAW4 1339 aa26.48■■□□□ 1.83
HLA-F-217ENST00000334668 MST1RQ04912 1400 aa26.47■■□□□ 1.83
HLA-F-217ENST00000334668 HSPA1LP34931 641 aa26.45■■□□□ 1.82
HLA-F-217ENST00000334668 CDC42BPGQ6DT37 1551 aa26.45■■□□□ 1.82
HLA-F-217ENST00000334668 TRPM1Q7Z4N2 1603 aa26.43■■□□□ 1.82
HLA-F-217ENST00000334668 NBPF1Q3BBV0 1214 aa26.43■■□□□ 1.82
HLA-F-217ENST00000334668 TONSLQ96HA7 1378 aa26.43■■□□□ 1.82
HLA-F-217ENST00000334668 ARHGEF28Q8N1W1 1705 aaKnown RBP26.42■■□□□ 1.82
HLA-F-217ENST00000334668 TRAK1Q9UPV9 953 aa26.42■■□□□ 1.82
HLA-F-217ENST00000334668 PRAM1Q96QH2 718 aa26.41■■□□□ 1.82
HLA-F-217ENST00000334668 C1orf167Q5SNV9 1468 aa26.39■■□□□ 1.82
HLA-F-217ENST00000334668 NBPF8Q3BBV2 869 aa26.38■■□□□ 1.81
HLA-F-217ENST00000334668 BRINP3Q76B58 766 aa26.37■■□□□ 1.81
HLA-F-217ENST00000334668 POGKQ9P215 609 aa26.36■■□□□ 1.81
HLA-F-217ENST00000334668 ADGRB2O60241 1585 aa26.36■■□□□ 1.81
HLA-F-217ENST00000334668 FMN2Q9NZ56 1722 aa26.35■■□□□ 1.81
HLA-F-217ENST00000334668 AHDC1Q5TGY3 1603 aaPredicted RBP26.34■■□□□ 1.81
HLA-F-217ENST00000334668 GPRASP1Q5JY77 1395 aa26.33■■□□□ 1.8
HLA-F-217ENST00000334668 PHLPP1O60346 1717 aa26.32■■□□□ 1.8
HLA-F-217ENST00000334668 SAFB2Q14151 953 aaKnown RBP eCLIP26.32■■□□□ 1.8
HLA-F-217ENST00000334668 TIMELESSQ9UNS1 1208 aa26.31■■□□□ 1.8
HLA-F-217ENST00000334668 NHSL1Q5SYE7 1610 aa26.31■■□□□ 1.8
HLA-F-217ENST00000334668 ROCK2O75116 1388 aaKnown RBP26.29■■□□□ 1.8
HLA-F-217ENST00000334668 COL16A1Q07092 1604 aaPredicted RBP26.28■■□□□ 1.8
HLA-F-217ENST00000334668 RALGAPBQ86X10 1494 aa26.28■■□□□ 1.8
HLA-F-217ENST00000334668 CCER1Q8TC90 406 aaPredicted RBP26.27■■□□□ 1.8
HLA-F-217ENST00000334668 ORAI2Q96SN7 254 aa26.27■■□□□ 1.8
HLA-F-217ENST00000334668 RGPD8O14715 1765 aaPredicted RBP26.26■■□□□ 1.79
HLA-F-217ENST00000334668 MINK1Q8N4C8 1332 aaPredicted RBP26.25■■□□□ 1.79
HLA-F-217ENST00000334668 HIRIP3Q9BW71 556 aaPredicted RBP26.23■■□□□ 1.79
HLA-F-217ENST00000334668 USP32Q8NFA0 1604 aa26.22■■□□□ 1.79
HLA-F-217ENST00000334668 WASLO00401 505 aaPredicted RBP26.22■■□□□ 1.79
HLA-F-217ENST00000334668 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
HLA-F-217ENST00000334668 CENPJQ9HC77 1338 aaPredicted RBP26.21■■□□□ 1.79
HLA-F-217ENST00000334668 QRICH2Q9H0J4 1663 aa26.2■■□□□ 1.78
HLA-F-217ENST00000334668 NUTM2FA1L443 756 aa26.2■■□□□ 1.78
HLA-F-217ENST00000334668 ESCO1Q5FWF5 840 aa26.2■■□□□ 1.78
HLA-F-217ENST00000334668 TULP4Q9NRJ4 1543 aa26.19■■□□□ 1.78
HLA-F-217ENST00000334668 EIF3AQ14152 1382 aaKnown RBP26.19■■□□□ 1.78
HLA-F-217ENST00000334668 KIF1AQ12756 1690 aa26.19■■□□□ 1.78
HLA-F-217ENST00000334668 DDX17Q92841 729 aaKnown RBP26.18■■□□□ 1.78
HLA-F-217ENST00000334668 CARD11Q9BXL7 1154 aa26.17■■□□□ 1.78
HLA-F-217ENST00000334668 JCADQ9P266 1359 aa26.17■■□□□ 1.78
HLA-F-217ENST00000334668 SOS2Q07890 1332 aaPredicted RBP26.16■■□□□ 1.78
HLA-F-217ENST00000334668 PRR36Q9H6K5 1346 aa26.15■■□□□ 1.78
HLA-F-217ENST00000334668 SHPRHQ149N8 1683 aa26.15■■□□□ 1.78
HLA-F-217ENST00000334668 NPHP3Q7Z494 1330 aa26.14■■□□□ 1.77
HLA-F-217ENST00000334668 ATP7BP35670 1465 aa26.12■■□□□ 1.77
HLA-F-217ENST00000334668 PXDNQ92626 1479 aa26.12■■□□□ 1.77
HLA-F-217ENST00000334668 LRRC59Q96AG4 307 aaKnown RBP26.12■■□□□ 1.77
HLA-F-217ENST00000334668 CDK19Q9BWU1 502 aa26.12■■□□□ 1.77
HLA-F-217ENST00000334668 PHF8Q9UPP1 1060 aa26.12■■□□□ 1.77
HLA-F-217ENST00000334668 FOXO3O43524 673 aa26.11■■□□□ 1.77
HLA-F-217ENST00000334668 MED1Q15648 1581 aaPredicted RBP26.11■■□□□ 1.77
HLA-F-217ENST00000334668 ITSN1Q15811 1721 aa26.11■■□□□ 1.77
HLA-F-217ENST00000334668 SBNO2Q9Y2G9 1366 aa26.1■■□□□ 1.77
HLA-F-217ENST00000334668 NUDT16Q96DE0 195 aaKnown RBP26.08■■□□□ 1.77
HLA-F-217ENST00000334668 TOPAZ1Q8N9V7 1692 aa26.08■■□□□ 1.77
HLA-F-217ENST00000334668 SPATA31A6Q5VVP1 1343 aa26.05■■□□□ 1.76
HLA-F-217ENST00000334668 PNPLA6Q8IY17 1366 aa26.05■■□□□ 1.76
HLA-F-217ENST00000334668 PMFBP1Q8TBY8 1022 aa26.03■■□□□ 1.76
HLA-F-217ENST00000334668 CCDC61Q9Y6R9 512 aa26.03■■□□□ 1.76
HLA-F-217ENST00000334668 EVC2Q86UK5 1308 aa26.03■■□□□ 1.76
HLA-F-217ENST00000334668 U3KPZ7 1027 aaPredicted RBP26.02■■□□□ 1.76
HLA-F-217ENST00000334668 XPCQ01831 940 aaPredicted RBP26.01■■□□□ 1.75
HLA-F-217ENST00000334668 KRT28Q7Z3Y7 464 aa26.01■■□□□ 1.75
HLA-F-217ENST00000334668 COL22A1Q8NFW1 1626 aaPredicted RBP26■■□□□ 1.75
HLA-F-217ENST00000334668 PLEKHG3A1L390 1219 aa26■■□□□ 1.75
HLA-F-217ENST00000334668 SRPK2P78362 688 aaKnown RBP26■■□□□ 1.75
HLA-F-217ENST00000334668 CABP2Q9NPB3 220 aa26■■□□□ 1.75
HLA-F-217ENST00000334668 TRPM3Q9HCF6 1732 aaPredicted RBP25.99■■□□□ 1.75
HLA-F-217ENST00000334668 SBNO1A3KN83 1393 aa25.98■■□□□ 1.75
HLA-F-217ENST00000334668 POLR3AO14802 1390 aaPredicted RBP25.98■■□□□ 1.75
HLA-F-217ENST00000334668 SPATA31A3Q5VYP0 1347 aa25.98■■□□□ 1.75
HLA-F-217ENST00000334668 PSME1Q06323 249 aa25.98■■□□□ 1.75
HLA-F-217ENST00000334668 LRP6O75581 1613 aa25.98■■□□□ 1.75
HLA-F-217ENST00000334668 ST20-MTHFSA0A0A6YYL1 179 aa25.97■■□□□ 1.75
HLA-F-217ENST00000334668 TESK2Q96S53 571 aa25.97■■□□□ 1.75
HLA-F-217ENST00000334668 USP47Q96K76 1375 aa25.96■■□□□ 1.75
HLA-F-217ENST00000334668 DISP3Q9P2K9 1392 aa25.96■■□□□ 1.75
HLA-F-217ENST00000334668 TNS3Q68CZ2 1445 aa25.95■■□□□ 1.74
HLA-F-217ENST00000334668 SLC4A2P04920 1241 aa25.94■■□□□ 1.74
HLA-F-217ENST00000334668 NGDNQ8NEJ9 315 aaKnown RBP25.94■■□□□ 1.74
HLA-F-217ENST00000334668 PPIP5K1Q6PFW1 1433 aa25.94■■□□□ 1.74
HLA-F-217ENST00000334668 ALS2Q96Q42 1657 aa25.93■■□□□ 1.74
HLA-F-217ENST00000334668 ACEP12821 1306 aa25.92■■□□□ 1.74
HLA-F-217ENST00000334668 SLC24A1O60721 1099 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms