RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 NEO1Q92859 1461 aa30.48■■■□□ 2.47
NDEL1-201ENST00000334527 PIK3C2BO00750 1634 aa30.48■■■□□ 2.47
NDEL1-201ENST00000334527 BCAR3O75815 825 aa30.47■■■□□ 2.47
NDEL1-201ENST00000334527 NUTM2DQ5VT03 806 aaPredicted RBP30.47■■■□□ 2.47
NDEL1-201ENST00000334527 USP32Q8NFA0 1604 aa30.46■■■□□ 2.47
NDEL1-201ENST00000334527 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.46
NDEL1-201ENST00000334527 NEXMIFQ5QGS0 1516 aa30.44■■■□□ 2.46
NDEL1-201ENST00000334527 WWC1Q8IX03 1113 aa30.44■■■□□ 2.46
NDEL1-201ENST00000334527 VGFO15240 615 aaPredicted RBP30.44■■■□□ 2.46
NDEL1-201ENST00000334527 ARHGEF28Q8N1W1 1705 aaKnown RBP30.43■■■□□ 2.46
NDEL1-201ENST00000334527 CGNL1Q0VF96 1302 aa30.42■■■□□ 2.46
NDEL1-201ENST00000334527 EVC2Q86UK5 1308 aa30.41■■■□□ 2.46
NDEL1-201ENST00000334527 TULP4Q9NRJ4 1543 aa30.4■■■□□ 2.46
NDEL1-201ENST00000334527 RUNDC1Q96C34 613 aa30.39■■■□□ 2.46
NDEL1-201ENST00000334527 PUS7Q96PZ0 661 aaKnown RBP30.37■■■□□ 2.45
NDEL1-201ENST00000334527 DEKP35659 375 aaKnown RBP30.37■■■□□ 2.45
NDEL1-201ENST00000334527 ARHGAP31Q2M1Z3 1444 aa30.37■■■□□ 2.45
NDEL1-201ENST00000334527 MTHFSP49914 203 aa30.36■■■□□ 2.45
NDEL1-201ENST00000334527 NEUROD2Q15784 382 aa30.36■■■□□ 2.45
NDEL1-201ENST00000334527 ANKRD36BQ8N2N9 1353 aa30.36■■■□□ 2.45
NDEL1-201ENST00000334527 IQSEC2Q5JU85 1478 aa30.35■■■□□ 2.45
NDEL1-201ENST00000334527 BCL11AQ9H165 835 aa30.35■■■□□ 2.45
NDEL1-201ENST00000334527 RRP7AQ9Y3A4 280 aaKnown RBP30.35■■■□□ 2.45
NDEL1-201ENST00000334527 RICTORQ6R327 1708 aa30.35■■■□□ 2.45
NDEL1-201ENST00000334527 IDI1Q13907 227 aa30.34■■■□□ 2.45
NDEL1-201ENST00000334527 TCP11L2Q8N4U5 519 aa30.34■■■□□ 2.45
NDEL1-201ENST00000334527 CFAP53Q96M91 514 aa30.34■■■□□ 2.45
NDEL1-201ENST00000334527 CABP2Q9NPB3 220 aa30.32■■■□□ 2.44
NDEL1-201ENST00000334527 PDE3AQ14432 1141 aa30.31■■■□□ 2.44
NDEL1-201ENST00000334527 RTL5Q5HYW3 569 aaPredicted RBP30.31■■■□□ 2.44
NDEL1-201ENST00000334527 NSD2O96028 1365 aa30.31■■■□□ 2.44
NDEL1-201ENST00000334527 NINLQ9Y2I6 1382 aa30.3■■■□□ 2.44
NDEL1-201ENST00000334527 CANXP27824 592 aaKnown RBP30.3■■■□□ 2.44
NDEL1-201ENST00000334527 SAFB2Q14151 953 aaKnown RBP eCLIP30.3■■■□□ 2.44
NDEL1-201ENST00000334527 FAM161AQ3B820 660 aa30.29■■■□□ 2.44
NDEL1-201ENST00000334527 DDRGK1Q96HY6 314 aa30.29■■■□□ 2.44
NDEL1-201ENST00000334527 YEATS2Q9ULM3 1422 aa30.29■■■□□ 2.44
NDEL1-201ENST00000334527 PHF23Q9BUL5 403 aaPredicted RBP30.28■■■□□ 2.44
NDEL1-201ENST00000334527 SLC52A1Q9NWF4 448 aa30.28■■■□□ 2.44
NDEL1-201ENST00000334527 ZFYVE9O95405 1425 aa30.28■■■□□ 2.44
NDEL1-201ENST00000334527 RGS3P49796 1198 aa30.27■■■□□ 2.44
NDEL1-201ENST00000334527 MYO5BQ9ULV0 1848 aa30.26■■■□□ 2.44
NDEL1-201ENST00000334527 SENP3Q9H4L4 574 aaPredicted RBP30.26■■■□□ 2.43
NDEL1-201ENST00000334527 C8orf34Q49A92 452 aa30.26■■■□□ 2.43
NDEL1-201ENST00000334527 STK26Q9P289 416 aa30.26■■■□□ 2.43
NDEL1-201ENST00000334527 WDR63Q8IWG1 891 aa30.25■■■□□ 2.43
NDEL1-201ENST00000334527 PANK1Q8TE04 598 aa30.24■■■□□ 2.43
NDEL1-201ENST00000334527 LAS1LQ9Y4W2 734 aaKnown RBP30.23■■■□□ 2.43
NDEL1-201ENST00000334527 PREX1Q8TCU6 1659 aa30.23■■■□□ 2.43
NDEL1-201ENST00000334527 FRAT1Q92837 279 aaPredicted RBP30.22■■■□□ 2.43
NDEL1-201ENST00000334527 COG6Q9Y2V7 657 aa30.22■■■□□ 2.43
NDEL1-201ENST00000334527 IGHDP01880 384 aa30.22■■■□□ 2.43
NDEL1-201ENST00000334527 CCDC27Q2M243 656 aa30.22■■■□□ 2.43
NDEL1-201ENST00000334527 RARSP54136 660 aaKnown RBP30.21■■■□□ 2.43
NDEL1-201ENST00000334527 TMEM131LA2VDJ0 1609 aa30.21■■■□□ 2.43
NDEL1-201ENST00000334527 SRPK2P78362 688 aaKnown RBP30.21■■■□□ 2.43
NDEL1-201ENST00000334527 CLUAP1Q96AJ1 413 aa30.21■■■□□ 2.43
NDEL1-201ENST00000334527 A0A1W2PP64 1363 aa30.21■■■□□ 2.43
NDEL1-201ENST00000334527 U2AF1L5P0DN76 240 aaPredicted RBP30.2■■■□□ 2.43
NDEL1-201ENST00000334527 U2AF1Q01081 240 aaKnown RBP eCLIP30.2■■■□□ 2.431e-9■□□□□ 8.6
NDEL1-201ENST00000334527 ABCC11Q96J66 1382 aa30.18■■■□□ 2.42
NDEL1-201ENST00000334527 PTPRMP28827 1452 aa30.17■■■□□ 2.42
NDEL1-201ENST00000334527 ADGRB2O60241 1585 aa30.14■■■□□ 2.42
NDEL1-201ENST00000334527 NCBP3Q53F19 620 aaKnown RBP30.14■■■□□ 2.42
NDEL1-201ENST00000334527 MINK1Q8N4C8 1332 aaPredicted RBP30.13■■■□□ 2.41
NDEL1-201ENST00000334527 PRAM1Q96QH2 718 aa30.13■■■□□ 2.41
NDEL1-201ENST00000334527 GGNBP2Q9H3C7 697 aa30.13■■■□□ 2.41
NDEL1-201ENST00000334527 MYH16Q9H6N6 1097 aa30.13■■■□□ 2.41
NDEL1-201ENST00000334527 PPM1GO15355 546 aaPredicted RBP30.12■■■□□ 2.41
NDEL1-201ENST00000334527 ATAD2Q6PL18 1390 aa30.12■■■□□ 2.41
NDEL1-201ENST00000334527 NEFMP07197 916 aa30.12■■■□□ 2.41
NDEL1-201ENST00000334527 YTHDC2Q9H6S0 1430 aaKnown RBP30.11■■■□□ 2.41
NDEL1-201ENST00000334527 BCL2L13Q9BXK5 485 aa30.11■■■□□ 2.41
NDEL1-201ENST00000334527 POGKQ9P215 609 aa30.11■■■□□ 2.41
NDEL1-201ENST00000334527 FBXO31Q5XUX0 539 aaPredicted RBP30.1■■■□□ 2.41
NDEL1-201ENST00000334527 TERF2IPQ9NYB0 399 aa30.09■■■□□ 2.41
NDEL1-201ENST00000334527 CLTCQ00610 1675 aaKnown RBP30.08■■■□□ 2.41
NDEL1-201ENST00000334527 RLBP1P12271 317 aa30.08■■■□□ 2.41
NDEL1-201ENST00000334527 TNNQ9UQP3 1299 aa30.08■■■□□ 2.41
NDEL1-201ENST00000334527 USP35Q9P2H5 1018 aa30.07■■■□□ 2.4
NDEL1-201ENST00000334527 U2SURPO15042 1029 aaKnown RBP30.07■■■□□ 2.4
NDEL1-201ENST00000334527 ANKRD26Q9UPS8 1709 aa30.07■■■□□ 2.4
NDEL1-201ENST00000334527 AAMPQ13685 434 aa30.06■■■□□ 2.4
NDEL1-201ENST00000334527 DAXXQ9UER7 740 aaPredicted RBP30.06■■■□□ 2.4
NDEL1-201ENST00000334527 SLC4A3P48751 1232 aa30.06■■■□□ 2.4
NDEL1-201ENST00000334527 CD163L1Q9NR16 1453 aa30.06■■■□□ 2.4
NDEL1-201ENST00000334527 MAPK8IP3Q9UPT6 1336 aa30.05■■■□□ 2.4
NDEL1-201ENST00000334527 VIRMAQ69YN4 1812 aaKnown RBP30.05■■■□□ 2.4
NDEL1-201ENST00000334527 FYB1O15117 783 aa30.05■■■□□ 2.4
NDEL1-201ENST00000334527 COL3A1P02461 1466 aaPredicted RBP30.05■■■□□ 2.4
NDEL1-201ENST00000334527 ALKQ9UM73 1620 aa30.05■■■□□ 2.4
NDEL1-201ENST00000334527 PLEKHF1Q96S99 279 aa30.04■■■□□ 2.4
NDEL1-201ENST00000334527 PMFBP1Q8TBY8 1022 aa30.03■■■□□ 2.4
NDEL1-201ENST00000334527 MED14O60244 1454 aa30.02■■■□□ 2.4
NDEL1-201ENST00000334527 STAG3Q9UJ98 1225 aa30.01■■■□□ 2.4
NDEL1-201ENST00000334527 NLRP1Q9C000 1473 aa30.01■■■□□ 2.4
NDEL1-201ENST00000334527 PCDHB15Q9Y5E8 787 aa30.01■■■□□ 2.39
NDEL1-201ENST00000334527 TMPOP42166 694 aaKnown RBP30■■■□□ 2.39
NDEL1-201ENST00000334527 HDGFL2Q7Z4V5 671 aaPredicted RBP30■■■□□ 2.39
NDEL1-201ENST00000334527 TSR2Q969E8 191 aaKnown RBP30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms