RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 LTBP4Q8N2S1 1624 aa26.25■■□□□ 1.79
TSSC4-201ENST00000333256 TESK2Q96S53 571 aa26.25■■□□□ 1.79
TSSC4-201ENST00000333256 QRICH2Q9H0J4 1663 aa26.25■■□□□ 1.79
TSSC4-201ENST00000333256 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.23■■□□□ 1.79
TSSC4-201ENST00000333256 ADGRL3Q9HAR2 1447 aa26.19■■□□□ 1.78
TSSC4-201ENST00000333256 NALCNQ8IZF0 1738 aa26.18■■□□□ 1.78
TSSC4-201ENST00000333256 SBNO2Q9Y2G9 1366 aa26.17■■□□□ 1.78
TSSC4-201ENST00000333256 DISP3Q9P2K9 1392 aa26.17■■□□□ 1.78
TSSC4-201ENST00000333256 XIRP1Q702N8 1843 aaKnown RBP26.16■■□□□ 1.78
TSSC4-201ENST00000333256 TULP4Q9NRJ4 1543 aa26.15■■□□□ 1.78
TSSC4-201ENST00000333256 NUTM2FA1L443 756 aa26.15■■□□□ 1.78
TSSC4-201ENST00000333256 C11orf95C9JLR9 678 aaPredicted RBP26.15■■□□□ 1.78
TSSC4-201ENST00000333256 C19orf44Q9H6X5 657 aa26.14■■□□□ 1.78
TSSC4-201ENST00000333256 NCOA3Q9Y6Q9 1424 aa26.14■■□□□ 1.78
TSSC4-201ENST00000333256 EVC2Q86UK5 1308 aa26.13■■□□□ 1.77
TSSC4-201ENST00000333256 WASLO00401 505 aaPredicted RBP26.13■■□□□ 1.77
TSSC4-201ENST00000333256 TMF1P82094 1093 aa26.13■■□□□ 1.77
TSSC4-201ENST00000333256 CDK19Q9BWU1 502 aa26.13■■□□□ 1.77
TSSC4-201ENST00000333256 CABP2Q9NPB3 220 aa26.12■■□□□ 1.77
TSSC4-201ENST00000333256 MSH6P52701 1360 aa26.12■■□□□ 1.77
TSSC4-201ENST00000333256 SRPK2P78362 688 aaKnown RBP26.12■■□□□ 1.77
TSSC4-201ENST00000333256 ADGRB2O60241 1585 aa26.11■■□□□ 1.77
TSSC4-201ENST00000333256 POLR3GLQ9BT43 218 aa26.1■■□□□ 1.77
TSSC4-201ENST00000333256 ATF3P18847 181 aa26.08■■□□□ 1.77
TSSC4-201ENST00000333256 CDC42BPGQ6DT37 1551 aa26.08■■□□□ 1.77
TSSC4-201ENST00000333256 SLC24A1O60721 1099 aa26.06■■□□□ 1.76
TSSC4-201ENST00000333256 KIF7Q2M1P5 1343 aa26.05■■□□□ 1.76
TSSC4-201ENST00000333256 CERKQ8TCT0 537 aa26.04■■□□□ 1.76
TSSC4-201ENST00000333256 PRR36Q9H6K5 1346 aa26.04■■□□□ 1.76
TSSC4-201ENST00000333256 ZNF316A6NFI3 1004 aaPredicted RBP26.03■■□□□ 1.76
TSSC4-201ENST00000333256 CADPS2Q86UW7 1296 aa26.03■■□□□ 1.76
TSSC4-201ENST00000333256 WASHC2AQ641Q2 1341 aa26.03■■□□□ 1.76
TSSC4-201ENST00000333256 DCCP43146 1447 aa26.03■■□□□ 1.76
TSSC4-201ENST00000333256 NUDT16Q96DE0 195 aaKnown RBP26.03■■□□□ 1.76
TSSC4-201ENST00000333256 FMN2Q9NZ56 1722 aa26.02■■□□□ 1.76
TSSC4-201ENST00000333256 CDCA8Q53HL2 280 aa26.01■■□□□ 1.75
TSSC4-201ENST00000333256 ATP7BP35670 1465 aa26■■□□□ 1.75
TSSC4-201ENST00000333256 CCDC7Q96M83 1385 aa26■■□□□ 1.75
TSSC4-201ENST00000333256 MST1RQ04912 1400 aa25.99■■□□□ 1.75
TSSC4-201ENST00000333256 USP32Q8NFA0 1604 aa25.98■■□□□ 1.75
TSSC4-201ENST00000333256 TMC1Q8TDI8 760 aa25.97■■□□□ 1.75
TSSC4-201ENST00000333256 ORAI2Q96SN7 254 aa25.96■■□□□ 1.75
TSSC4-201ENST00000333256 SLAIN2Q9P270 581 aa25.96■■□□□ 1.75
TSSC4-201ENST00000333256 C1orf167Q5SNV9 1468 aa25.96■■□□□ 1.75
TSSC4-201ENST00000333256 ATAD2Q6PL18 1390 aa25.96■■□□□ 1.75
TSSC4-201ENST00000333256 ESCO1Q5FWF5 840 aa25.96■■□□□ 1.75
TSSC4-201ENST00000333256 CCDC61Q9Y6R9 512 aa25.96■■□□□ 1.75
TSSC4-201ENST00000333256 ANKARQ7Z5J8 1434 aa25.96■■□□□ 1.75
TSSC4-201ENST00000333256 CABP1Q9NZU7 370 aa25.95■■□□□ 1.74
TSSC4-201ENST00000333256 PUS7Q96PZ0 661 aaKnown RBP25.94■■□□□ 1.74
TSSC4-201ENST00000333256 SLC12A5Q9H2X9 1139 aa25.94■■□□□ 1.74
TSSC4-201ENST00000333256 PPIP5K1Q6PFW1 1433 aa25.94■■□□□ 1.74
TSSC4-201ENST00000333256 PMFBP1Q8TBY8 1022 aa25.93■■□□□ 1.74
TSSC4-201ENST00000333256 RGPD8O14715 1765 aaPredicted RBP25.93■■□□□ 1.74
TSSC4-201ENST00000333256 UBAP1LF5GYI3 381 aa25.92■■□□□ 1.74
TSSC4-201ENST00000333256 IQSEC2Q5JU85 1478 aa25.91■■□□□ 1.74
TSSC4-201ENST00000333256 TOM1O60784 492 aa25.89■■□□□ 1.73
TSSC4-201ENST00000333256 PHF8Q9UPP1 1060 aa25.89■■□□□ 1.73
TSSC4-201ENST00000333256 PIP4K2BP78356 416 aa25.88■■□□□ 1.73
TSSC4-201ENST00000333256 MYOM1P52179 1685 aa25.88■■□□□ 1.73
TSSC4-201ENST00000333256 TOPAZ1Q8N9V7 1692 aa25.88■■□□□ 1.73
TSSC4-201ENST00000333256 BRINP3Q76B58 766 aa25.87■■□□□ 1.73
TSSC4-201ENST00000333256 SCAF1Q9H7N4 1312 aaKnown RBP25.86■■□□□ 1.73
TSSC4-201ENST00000333256 PLEKHG3A1L390 1219 aa25.85■■□□□ 1.73
TSSC4-201ENST00000333256 ACEP12821 1306 aa25.85■■□□□ 1.73
TSSC4-201ENST00000333256 DDX10Q13206 875 aaKnown RBP25.84■■□□□ 1.73
TSSC4-201ENST00000333256 NGDNQ8NEJ9 315 aaKnown RBP25.84■■□□□ 1.73
TSSC4-201ENST00000333256 DDX17Q92841 729 aaKnown RBP25.84■■□□□ 1.73
TSSC4-201ENST00000333256 ITSN1Q15811 1721 aa25.84■■□□□ 1.73
TSSC4-201ENST00000333256 FOXO3O43524 673 aa25.83■■□□□ 1.73
TSSC4-201ENST00000333256 NINLQ9Y2I6 1382 aa25.83■■□□□ 1.72
TSSC4-201ENST00000333256 CD163L1Q9NR16 1453 aa25.82■■□□□ 1.72
TSSC4-201ENST00000333256 A0A1W2PP64 1363 aa25.81■■□□□ 1.72
TSSC4-201ENST00000333256 XPCQ01831 940 aaPredicted RBP25.81■■□□□ 1.72
TSSC4-201ENST00000333256 PANK3Q9H999 370 aa25.81■■□□□ 1.72
TSSC4-201ENST00000333256 TERF2IPQ9NYB0 399 aa25.8■■□□□ 1.72
TSSC4-201ENST00000333256 POLR3AO14802 1390 aaPredicted RBP25.79■■□□□ 1.72
TSSC4-201ENST00000333256 HDGFL2Q7Z4V5 671 aaPredicted RBP25.79■■□□□ 1.72
TSSC4-201ENST00000333256 ANKRD36BQ8N2N9 1353 aa25.78■■□□□ 1.72
TSSC4-201ENST00000333256 CPSF1Q10570 1443 aaKnown RBP25.78■■□□□ 1.72
TSSC4-201ENST00000333256 ROBO1Q9Y6N7 1651 aa25.78■■□□□ 1.72
TSSC4-201ENST00000333256 PSME1Q06323 249 aa25.77■■□□□ 1.72
TSSC4-201ENST00000333256 CARD14Q9BXL6 1004 aa25.77■■□□□ 1.72
TSSC4-201ENST00000333256 KTN1Q86UP2 1357 aaKnown RBP25.76■■□□□ 1.71
TSSC4-201ENST00000333256 KIF1AQ12756 1690 aa25.76■■□□□ 1.71
TSSC4-201ENST00000333256 ZNF692Q9BU19 519 aaPredicted RBP25.74■■□□□ 1.71
TSSC4-201ENST00000333256 NPHP3Q7Z494 1330 aa25.73■■□□□ 1.71
TSSC4-201ENST00000333256 USP6P35125 1406 aa25.72■■□□□ 1.71
TSSC4-201ENST00000333256 KRT28Q7Z3Y7 464 aa25.72■■□□□ 1.71
TSSC4-201ENST00000333256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.71■■□□□ 1.71
TSSC4-201ENST00000333256 NSD3Q9BZ95 1437 aa25.71■■□□□ 1.71
TSSC4-201ENST00000333256 PAK3O75914 559 aaPredicted RBP25.71■■□□□ 1.71
TSSC4-201ENST00000333256 AKAP12Q02952 1782 aa25.7■■□□□ 1.7
TSSC4-201ENST00000333256 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
TSSC4-201ENST00000333256 PXDNQ92626 1479 aa25.67■■□□□ 1.7
TSSC4-201ENST00000333256 MON2Q7Z3U7 1717 aa25.67■■□□□ 1.7
TSSC4-201ENST00000333256 EDC4Q6P2E9 1401 aaKnown RBP25.67■■□□□ 1.7
TSSC4-201ENST00000333256 PER1O15534 1290 aaPredicted RBP25.67■■□□□ 1.7
TSSC4-201ENST00000333256 TTC21BQ7Z4L5 1316 aa25.67■■□□□ 1.7
TSSC4-201ENST00000333256 KNSTRNQ9Y448 316 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms