RNA–Protein interactions for RNA: ENST00000333175.9

TMEM259-201, Transcript of transmembrane protein 259, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM259, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-201ENST00000333175 EVC2Q86UK5 1308 aa28.97■■■□□ 2.23
TMEM259-201ENST00000333175 TSPOAP1O95153 1857 aa28.96■■■□□ 2.23
TMEM259-201ENST00000333175 SLC52A1Q9NWF4 448 aa28.95■■■□□ 2.23
TMEM259-201ENST00000333175 POLR3AO14802 1390 aaPredicted RBP28.94■■■□□ 2.22
TMEM259-201ENST00000333175 PREX1Q8TCU6 1659 aa28.94■■■□□ 2.22
TMEM259-201ENST00000333175 NEUROD2Q15784 382 aa28.93■■■□□ 2.22
TMEM259-201ENST00000333175 CGNL1Q0VF96 1302 aa28.92■■■□□ 2.22
TMEM259-201ENST00000333175 RRP7AQ9Y3A4 280 aaKnown RBP28.92■■■□□ 2.22
TMEM259-201ENST00000333175 TRMT2AQ8IZ69 625 aaKnown RBP28.91■■■□□ 2.22
TMEM259-201ENST00000333175 MTHFSP49914 203 aa28.9■■■□□ 2.22
TMEM259-201ENST00000333175 SHPRHQ149N8 1683 aa28.89■■■□□ 2.22
TMEM259-201ENST00000333175 TMEM131LA2VDJ0 1609 aa28.89■■■□□ 2.22
TMEM259-201ENST00000333175 SRPK2P78362 688 aaKnown RBP28.88■■■□□ 2.21
TMEM259-201ENST00000333175 MINK1Q8N4C8 1332 aaPredicted RBP28.88■■■□□ 2.21
TMEM259-201ENST00000333175 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
TMEM259-201ENST00000333175 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
TMEM259-201ENST00000333175 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
TMEM259-201ENST00000333175 BCAR3O75815 825 aa28.87■■■□□ 2.21
TMEM259-201ENST00000333175 NKTRP30414 1462 aaKnown RBP28.87■■■□□ 2.21
TMEM259-201ENST00000333175 TCERG1O14776 1098 aaKnown RBP28.86■■■□□ 2.21
TMEM259-201ENST00000333175 ANKRD36BQ8N2N9 1353 aa28.86■■■□□ 2.21
TMEM259-201ENST00000333175 E9PSI1 815 aa28.86■■■□□ 2.21
TMEM259-201ENST00000333175 PRAM1Q96QH2 718 aa28.85■■■□□ 2.21
TMEM259-201ENST00000333175 STAG3Q9UJ98 1225 aa28.85■■■□□ 2.21
TMEM259-201ENST00000333175 DIP2BQ9P265 1576 aa28.84■■■□□ 2.21
TMEM259-201ENST00000333175 WWC1Q8IX03 1113 aa28.84■■■□□ 2.21
TMEM259-201ENST00000333175 MLECQ14165 292 aa28.84■■■□□ 2.21
TMEM259-201ENST00000333175 ZFYVE9O95405 1425 aa28.84■■■□□ 2.21
TMEM259-201ENST00000333175 ANP32AP39687 249 aaKnown RBP28.83■■■□□ 2.21
TMEM259-201ENST00000333175 PAK3O75914 559 aaPredicted RBP28.83■■■□□ 2.21
TMEM259-201ENST00000333175 USP32Q8NFA0 1604 aa28.83■■■□□ 2.21
TMEM259-201ENST00000333175 NPM2Q86SE8 214 aaKnown RBP28.82■■■□□ 2.2
TMEM259-201ENST00000333175 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.82■■■□□ 2.2
TMEM259-201ENST00000333175 POGKQ9P215 609 aa28.81■■■□□ 2.2
TMEM259-201ENST00000333175 A0A1W2PP64 1363 aa28.81■■■□□ 2.2
TMEM259-201ENST00000333175 PDE4AP27815 886 aa28.8■■■□□ 2.2
TMEM259-201ENST00000333175 TCP11L2Q8N4U5 519 aa28.8■■■□□ 2.2
TMEM259-201ENST00000333175 NOP58Q9Y2X3 529 aaKnown RBP28.8■■■□□ 2.2
TMEM259-201ENST00000333175 PTPRMP28827 1452 aa28.8■■■□□ 2.2
TMEM259-201ENST00000333175 RUNDC1Q96C34 613 aa28.79■■■□□ 2.2
TMEM259-201ENST00000333175 GGNBP2Q9H3C7 697 aa28.78■■■□□ 2.2
TMEM259-201ENST00000333175 YTHDC2Q9H6S0 1430 aaKnown RBP28.78■■■□□ 2.2
TMEM259-201ENST00000333175 CFAP53Q96M91 514 aa28.78■■■□□ 2.2
TMEM259-201ENST00000333175 PUS7Q96PZ0 661 aaKnown RBP28.77■■■□□ 2.2
TMEM259-201ENST00000333175 KDM2BQ8NHM5 1336 aa28.75■■■□□ 2.19
TMEM259-201ENST00000333175 U2AF1L5P0DN76 240 aaPredicted RBP28.74■■■□□ 2.19
TMEM259-201ENST00000333175 U2AF1Q01081 240 aaKnown RBP eCLIP28.74■■■□□ 2.19
TMEM259-201ENST00000333175 IPO9Q96P70 1041 aaKnown RBP28.73■■■□□ 2.19
TMEM259-201ENST00000333175 BACH2Q9BYV9 841 aa28.73■■■□□ 2.19
TMEM259-201ENST00000333175 CLTCQ00610 1675 aaKnown RBP28.73■■■□□ 2.19
TMEM259-201ENST00000333175 IQSEC2Q5JU85 1478 aa28.73■■■□□ 2.19
TMEM259-201ENST00000333175 NGEFQ8N5V2 710 aa28.72■■■□□ 2.19
TMEM259-201ENST00000333175 ALKQ9UM73 1620 aa28.72■■■□□ 2.19
TMEM259-201ENST00000333175 MS4A1P11836 297 aa28.71■■■□□ 2.19
TMEM259-201ENST00000333175 NSD2O96028 1365 aa28.71■■■□□ 2.19
TMEM259-201ENST00000333175 ABCC11Q96J66 1382 aa28.7■■■□□ 2.19
TMEM259-201ENST00000333175 CENPQQ7L2Z9 268 aaPredicted RBP28.68■■■□□ 2.18
TMEM259-201ENST00000333175 CDK19Q9BWU1 502 aa28.68■■■□□ 2.18
TMEM259-201ENST00000333175 CANXP27824 592 aaKnown RBP28.67■■■□□ 2.18
TMEM259-201ENST00000333175 WAPLQ7Z5K2 1190 aa28.66■■■□□ 2.18
TMEM259-201ENST00000333175 ATAD2Q6PL18 1390 aa28.66■■■□□ 2.18
TMEM259-201ENST00000333175 U2SURPO15042 1029 aaKnown RBP28.66■■■□□ 2.18
TMEM259-201ENST00000333175 PANK1Q8TE04 598 aa28.66■■■□□ 2.18
TMEM259-201ENST00000333175 FRAT1Q92837 279 aaPredicted RBP28.66■■■□□ 2.18
TMEM259-201ENST00000333175 CD163L1Q9NR16 1453 aa28.66■■■□□ 2.18
TMEM259-201ENST00000333175 TERF2IPQ9NYB0 399 aa28.65■■■□□ 2.18
TMEM259-201ENST00000333175 FYB1O15117 783 aa28.65■■■□□ 2.18
TMEM259-201ENST00000333175 NINLQ9Y2I6 1382 aa28.64■■■□□ 2.18
TMEM259-201ENST00000333175 BCL2L13Q9BXK5 485 aa28.64■■■□□ 2.18
TMEM259-201ENST00000333175 CABP1Q9NZU7 370 aa28.64■■■□□ 2.18
TMEM259-201ENST00000333175 PHF23Q9BUL5 403 aaPredicted RBP28.63■■■□□ 2.17
TMEM259-201ENST00000333175 A2ML1A8K2U0 1454 aa28.63■■■□□ 2.17
TMEM259-201ENST00000333175 ZBTB47Q9UFB7 747 aaPredicted RBP28.62■■■□□ 2.17
TMEM259-201ENST00000333175 COG6Q9Y2V7 657 aa28.62■■■□□ 2.17
TMEM259-201ENST00000333175 AGLP35573 1532 aa28.61■■■□□ 2.17
TMEM259-201ENST00000333175 RIMS2Q9UQ26 1411 aa28.6■■■□□ 2.17
TMEM259-201ENST00000333175 RGS3P49796 1198 aa28.59■■■□□ 2.17
TMEM259-201ENST00000333175 NBR1Q14596 966 aa28.59■■■□□ 2.17
TMEM259-201ENST00000333175 REREQ9P2R6 1566 aa28.59■■■□□ 2.17
TMEM259-201ENST00000333175 ARHGEF40Q8TER5 1519 aa28.58■■■□□ 2.17
TMEM259-201ENST00000333175 RARSP54136 660 aaKnown RBP28.58■■■□□ 2.17
TMEM259-201ENST00000333175 WDR63Q8IWG1 891 aa28.58■■■□□ 2.17
TMEM259-201ENST00000333175 TNNQ9UQP3 1299 aa28.58■■■□□ 2.17
TMEM259-201ENST00000333175 HDGFL2Q7Z4V5 671 aaPredicted RBP28.58■■■□□ 2.17
TMEM259-201ENST00000333175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.58■■■□□ 2.17
TMEM259-201ENST00000333175 FBLN1P23142 703 aa28.57■■■□□ 2.16
TMEM259-201ENST00000333175 NLRP1Q9C000 1473 aa28.57■■■□□ 2.16
TMEM259-201ENST00000333175 SPATA31D1Q6ZQQ2 1576 aa28.56■■■□□ 2.16
TMEM259-201ENST00000333175 IGHDP01880 384 aa28.55■■■□□ 2.16
TMEM259-201ENST00000333175 PPP6R1Q9UPN7 881 aa28.55■■■□□ 2.16
TMEM259-201ENST00000333175 PDE3AQ14432 1141 aa28.54■■■□□ 2.16
TMEM259-201ENST00000333175 CCDC27Q2M243 656 aa28.54■■■□□ 2.16
TMEM259-201ENST00000333175 COL3A1P02461 1466 aaPredicted RBP28.54■■■□□ 2.16
TMEM259-201ENST00000333175 TSR2Q969E8 191 aaKnown RBP28.54■■■□□ 2.16
TMEM259-201ENST00000333175 PPM1GO15355 546 aaPredicted RBP28.52■■■□□ 2.16
TMEM259-201ENST00000333175 ADGRB2O60241 1585 aa28.51■■■□□ 2.15
TMEM259-201ENST00000333175 RLBP1P12271 317 aa28.51■■■□□ 2.15
TMEM259-201ENST00000333175 PLEKHF1Q96S99 279 aa28.51■■■□□ 2.15
TMEM259-201ENST00000333175 ANKRD26Q9UPS8 1709 aa28.51■■■□□ 2.15
TMEM259-201ENST00000333175 CLUAP1Q96AJ1 413 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms