RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 TRAK1Q9UPV9 953 aa29.26■■■□□ 2.27
MRPL40-201ENST00000333130 PIP4K2BP78356 416 aa29.25■■■□□ 2.27
MRPL40-201ENST00000333130 WAPLQ7Z5K2 1190 aa29.23■■■□□ 2.27
MRPL40-201ENST00000333130 NBPF1Q3BBV0 1214 aa29.22■■■□□ 2.27
MRPL40-201ENST00000333130 PRAM1Q96QH2 718 aa29.22■■■□□ 2.27
MRPL40-201ENST00000333130 CDC42BPGQ6DT37 1551 aa29.22■■■□□ 2.27
MRPL40-201ENST00000333130 GPRASP1Q5JY77 1395 aa29.19■■■□□ 2.26
MRPL40-201ENST00000333130 PLEKHH1Q9ULM0 1364 aa29.19■■■□□ 2.26
MRPL40-201ENST00000333130 ILDR1Q86SU0 546 aaPredicted RBP29.18■■■□□ 2.26
MRPL40-201ENST00000333130 SLAIN2Q9P270 581 aa29.17■■■□□ 2.26
MRPL40-201ENST00000333130 SAFB2Q14151 953 aaKnown RBP eCLIP29.16■■■□□ 2.26
MRPL40-201ENST00000333130 ROBO1Q9Y6N7 1651 aa29.16■■■□□ 2.26
MRPL40-201ENST00000333130 EIF3AQ14152 1382 aaKnown RBP29.16■■■□□ 2.26
MRPL40-201ENST00000333130 ADGRB2O60241 1585 aa29.13■■■□□ 2.25
MRPL40-201ENST00000333130 MST1RQ04912 1400 aa29.12■■■□□ 2.25
MRPL40-201ENST00000333130 CARD11Q9BXL7 1154 aa29.12■■■□□ 2.25
MRPL40-201ENST00000333130 FMN2Q9NZ56 1722 aa29.11■■■□□ 2.25
MRPL40-201ENST00000333130 QRICH2Q9H0J4 1663 aa29.1■■■□□ 2.25
MRPL40-201ENST00000333130 CENPJQ9HC77 1338 aaPredicted RBP29.08■■■□□ 2.25
MRPL40-201ENST00000333130 MINK1Q8N4C8 1332 aaPredicted RBP29.07■■■□□ 2.24
MRPL40-201ENST00000333130 C1orf167Q5SNV9 1468 aa29.05■■■□□ 2.24
MRPL40-201ENST00000333130 HIRIP3Q9BW71 556 aaPredicted RBP29.02■■■□□ 2.24
MRPL40-201ENST00000333130 PHLPP1O60346 1717 aa29.01■■■□□ 2.23
MRPL40-201ENST00000333130 ANKARQ7Z5J8 1434 aa28.99■■■□□ 2.23
MRPL40-201ENST00000333130 BRINP3Q76B58 766 aa28.99■■■□□ 2.23
MRPL40-201ENST00000333130 WASLO00401 505 aaPredicted RBP28.98■■■□□ 2.23
MRPL40-201ENST00000333130 KIF1AQ12756 1690 aa28.97■■■□□ 2.23
MRPL40-201ENST00000333130 RGPD8O14715 1765 aaPredicted RBP28.97■■■□□ 2.23
MRPL40-201ENST00000333130 TULP4Q9NRJ4 1543 aa28.97■■■□□ 2.23
MRPL40-201ENST00000333130 ITSN1Q15811 1721 aa28.97■■■□□ 2.23
MRPL40-201ENST00000333130 NUTM2FA1L443 756 aa28.97■■■□□ 2.23
MRPL40-201ENST00000333130 HSPA1LP34931 641 aa28.97■■■□□ 2.23
MRPL40-201ENST00000333130 AHDC1Q5TGY3 1603 aaPredicted RBP28.96■■■□□ 2.23
MRPL40-201ENST00000333130 NHSL1Q5SYE7 1610 aa28.96■■■□□ 2.23
MRPL40-201ENST00000333130 ESCO1Q5FWF5 840 aa28.95■■■□□ 2.22
MRPL40-201ENST00000333130 SBNO2Q9Y2G9 1366 aa28.92■■■□□ 2.22
MRPL40-201ENST00000333130 USP32Q8NFA0 1604 aa28.91■■■□□ 2.22
MRPL40-201ENST00000333130 ORAI2Q96SN7 254 aa28.91■■■□□ 2.22
MRPL40-201ENST00000333130 EVC2Q86UK5 1308 aa28.91■■■□□ 2.22
MRPL40-201ENST00000333130 USP47Q96K76 1375 aa28.91■■■□□ 2.22
MRPL40-201ENST00000333130 ZEB1P37275 1124 aaPredicted RBP28.9■■■□□ 2.22
MRPL40-201ENST00000333130 CDK19Q9BWU1 502 aa28.89■■■□□ 2.22
MRPL40-201ENST00000333130 SLC24A1O60721 1099 aa28.88■■■□□ 2.21
MRPL40-201ENST00000333130 COL16A1Q07092 1604 aaPredicted RBP28.88■■■□□ 2.21
MRPL40-201ENST00000333130 SRPK2P78362 688 aaKnown RBP28.88■■■□□ 2.21
MRPL40-201ENST00000333130 NPHP3Q7Z494 1330 aa28.87■■■□□ 2.21
MRPL40-201ENST00000333130 ATP7BP35670 1465 aa28.86■■■□□ 2.21
MRPL40-201ENST00000333130 PHF8Q9UPP1 1060 aa28.85■■■□□ 2.21
MRPL40-201ENST00000333130 TOPAZ1Q8N9V7 1692 aa28.84■■■□□ 2.21
MRPL40-201ENST00000333130 NUDT16Q96DE0 195 aaKnown RBP28.83■■■□□ 2.21
MRPL40-201ENST00000333130 ST20-MTHFSA0A0A6YYL1 179 aa28.81■■■□□ 2.2
MRPL40-201ENST00000333130 PRR36Q9H6K5 1346 aa28.8■■■□□ 2.2
MRPL40-201ENST00000333130 FOXO3O43524 673 aa28.79■■■□□ 2.2
MRPL40-201ENST00000333130 CCDC61Q9Y6R9 512 aa28.79■■■□□ 2.2
MRPL40-201ENST00000333130 JCADQ9P266 1359 aa28.78■■■□□ 2.2
MRPL40-201ENST00000333130 DDX17Q92841 729 aaKnown RBP28.77■■■□□ 2.2
MRPL40-201ENST00000333130 LRRC59Q96AG4 307 aaKnown RBP28.77■■■□□ 2.2
MRPL40-201ENST00000333130 CABP2Q9NPB3 220 aa28.77■■■□□ 2.2
MRPL40-201ENST00000333130 SHPRHQ149N8 1683 aa28.77■■■□□ 2.2
MRPL40-201ENST00000333130 PMFBP1Q8TBY8 1022 aa28.76■■■□□ 2.2
MRPL40-201ENST00000333130 TESK2Q96S53 571 aa28.76■■■□□ 2.2
MRPL40-201ENST00000333130 ATAD2Q6PL18 1390 aa28.76■■■□□ 2.19
MRPL40-201ENST00000333130 SOS2Q07890 1332 aaPredicted RBP28.76■■■□□ 2.19
MRPL40-201ENST00000333130 EIF4G2P78344 907 aaKnown RBP eCLIP28.75■■■□□ 2.19
MRPL40-201ENST00000333130 NGDNQ8NEJ9 315 aaKnown RBP28.75■■■□□ 2.19
MRPL40-201ENST00000333130 PXDNQ92626 1479 aa28.75■■■□□ 2.19
MRPL40-201ENST00000333130 PSME1Q06323 249 aa28.75■■■□□ 2.19
MRPL40-201ENST00000333130 PPIP5K1Q6PFW1 1433 aa28.74■■■□□ 2.19
MRPL40-201ENST00000333130 TMF1P82094 1093 aa28.72■■■□□ 2.19
MRPL40-201ENST00000333130 HSPA5P11021 654 aaKnown RBP28.71■■■□□ 2.19
MRPL40-201ENST00000333130 KRT28Q7Z3Y7 464 aa28.7■■■□□ 2.18
MRPL40-201ENST00000333130 XPCQ01831 940 aaPredicted RBP28.69■■■□□ 2.18
MRPL40-201ENST00000333130 CDCA8Q53HL2 280 aa28.69■■■□□ 2.18
MRPL40-201ENST00000333130 PLEKHG3A1L390 1219 aa28.68■■■□□ 2.18
MRPL40-201ENST00000333130 PUS7Q96PZ0 661 aaKnown RBP28.68■■■□□ 2.18
MRPL40-201ENST00000333130 POLR3AO14802 1390 aaPredicted RBP28.67■■■□□ 2.18
MRPL40-201ENST00000333130 SPATA31A6Q5VVP1 1343 aa28.66■■■□□ 2.18
MRPL40-201ENST00000333130 ACEP12821 1306 aa28.65■■■□□ 2.18
MRPL40-201ENST00000333130 SBNO1A3KN83 1393 aa28.65■■■□□ 2.18
MRPL40-201ENST00000333130 TRPM3Q9HCF6 1732 aaPredicted RBP28.64■■■□□ 2.18
MRPL40-201ENST00000333130 TNS3Q68CZ2 1445 aa28.64■■■□□ 2.18
MRPL40-201ENST00000333130 CABP1Q9NZU7 370 aa28.63■■■□□ 2.17
MRPL40-201ENST00000333130 PNPLA6Q8IY17 1366 aa28.63■■■□□ 2.17
MRPL40-201ENST00000333130 DISP3Q9P2K9 1392 aa28.63■■■□□ 2.17
MRPL40-201ENST00000333130 NINLQ9Y2I6 1382 aa28.62■■■□□ 2.17
MRPL40-201ENST00000333130 COL22A1Q8NFW1 1626 aaPredicted RBP28.62■■■□□ 2.17
MRPL40-201ENST00000333130 ARHGEF10O15013 1369 aa28.62■■■□□ 2.17
MRPL40-201ENST00000333130 AKAP12Q02952 1782 aa28.61■■■□□ 2.17
MRPL40-201ENST00000333130 MED1Q15648 1581 aaPredicted RBP28.61■■■□□ 2.17
MRPL40-201ENST00000333130 SPATA31A3Q5VYP0 1347 aa28.61■■■□□ 2.17
MRPL40-201ENST00000333130 TMC1Q8TDI8 760 aa28.6■■■□□ 2.17
MRPL40-201ENST00000333130 BRD4O60885 1362 aaPredicted RBP28.59■■■□□ 2.17
MRPL40-201ENST00000333130 PAK3O75914 559 aaPredicted RBP28.59■■■□□ 2.17
MRPL40-201ENST00000333130 LMOD2Q6P5Q4 547 aa28.59■■■□□ 2.17
MRPL40-201ENST00000333130 ALS2Q96Q42 1657 aa28.58■■■□□ 2.17
MRPL40-201ENST00000333130 ZNF692Q9BU19 519 aaPredicted RBP28.57■■■□□ 2.16
MRPL40-201ENST00000333130 MYOM1P52179 1685 aa28.56■■■□□ 2.16
MRPL40-201ENST00000333130 USP6P35125 1406 aa28.55■■■□□ 2.16
MRPL40-201ENST00000333130 HDGFL2Q7Z4V5 671 aaPredicted RBP28.54■■■□□ 2.16
MRPL40-201ENST00000333130 TERF2IPQ9NYB0 399 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms