RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
RIPK4-201ENST00000332512 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
RIPK4-201ENST00000332512 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
RIPK4-201ENST00000332512 NKTRP30414 1462 aaKnown RBP16.75■□□□□ 0.27
RIPK4-201ENST00000332512 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
RIPK4-201ENST00000332512 CAVIN1Q6NZI2 390 aaKnown RBP16.73■□□□□ 0.27
RIPK4-201ENST00000332512 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
RIPK4-201ENST00000332512 PRAG1Q86YV5 1406 aa16.73■□□□□ 0.27
RIPK4-201ENST00000332512 PRAM1Q96QH2 718 aa16.73■□□□□ 0.27
RIPK4-201ENST00000332512 TRIM27P14373 513 aa16.73■□□□□ 0.27
RIPK4-201ENST00000332512 NGEFQ8N5V2 710 aa16.73■□□□□ 0.27
RIPK4-201ENST00000332512 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
RIPK4-201ENST00000332512 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
RIPK4-201ENST00000332512 MRE11P49959 708 aa16.72■□□□□ 0.27
RIPK4-201ENST00000332512 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
RIPK4-201ENST00000332512 CABP1Q9NZU7 370 aa16.72■□□□□ 0.27
RIPK4-201ENST00000332512 DENND4BO75064 1496 aaPredicted RBP16.72■□□□□ 0.27
RIPK4-201ENST00000332512 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
RIPK4-201ENST00000332512 CCDC141Q6ZP82 1450 aa16.72■□□□□ 0.27
RIPK4-201ENST00000332512 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
RIPK4-201ENST00000332512 CHMP3Q9Y3E7 222 aa16.71■□□□□ 0.27
RIPK4-201ENST00000332512 ST18O60284 1047 aa16.71■□□□□ 0.26
RIPK4-201ENST00000332512 BCL11BQ9C0K0 894 aaPredicted RBP16.71■□□□□ 0.26
RIPK4-201ENST00000332512 KIF16BQ96L93 1317 aa16.7■□□□□ 0.26
RIPK4-201ENST00000332512 GRPEL1Q9HAV7 217 aa16.7■□□□□ 0.26
RIPK4-201ENST00000332512 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
RIPK4-201ENST00000332512 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
RIPK4-201ENST00000332512 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
RIPK4-201ENST00000332512 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
RIPK4-201ENST00000332512 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
RIPK4-201ENST00000332512 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
RIPK4-201ENST00000332512 RBM10P98175 930 aaKnown RBP16.69■□□□□ 0.26
RIPK4-201ENST00000332512 MCCP23508 829 aa16.69■□□□□ 0.26
RIPK4-201ENST00000332512 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
RIPK4-201ENST00000332512 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
RIPK4-201ENST00000332512 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
RIPK4-201ENST00000332512 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
RIPK4-201ENST00000332512 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
RIPK4-201ENST00000332512 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
RIPK4-201ENST00000332512 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
RIPK4-201ENST00000332512 ATP10BO94823 1461 aa16.67■□□□□ 0.26
RIPK4-201ENST00000332512 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.26
RIPK4-201ENST00000332512 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
RIPK4-201ENST00000332512 FGD1P98174 961 aa16.66■□□□□ 0.26
RIPK4-201ENST00000332512 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
RIPK4-201ENST00000332512 COG3Q96JB2 828 aa16.66■□□□□ 0.26
RIPK4-201ENST00000332512 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
RIPK4-201ENST00000332512 WDR62O43379 1518 aa16.65■□□□□ 0.26
RIPK4-201ENST00000332512 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
RIPK4-201ENST00000332512 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
RIPK4-201ENST00000332512 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
RIPK4-201ENST00000332512 GPRASP1Q5JY77 1395 aa16.64■□□□□ 0.25
RIPK4-201ENST00000332512 ESPNB1AK53 854 aa16.64■□□□□ 0.25
RIPK4-201ENST00000332512 SMARCA5O60264 1052 aaPredicted RBP16.64■□□□□ 0.25
RIPK4-201ENST00000332512 NUTM2GQ5VZR2 741 aa16.64■□□□□ 0.25
RIPK4-201ENST00000332512 KIAA1211Q6ZU35 1233 aa16.64■□□□□ 0.25
RIPK4-201ENST00000332512 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
RIPK4-201ENST00000332512 HMMRO75330 724 aa16.64■□□□□ 0.25
RIPK4-201ENST00000332512 EIF2S2P20042 333 aaKnown RBP16.64■□□□□ 0.25
RIPK4-201ENST00000332512 SKOR2Q2VWA4 1001 aaPredicted RBP16.64■□□□□ 0.25
RIPK4-201ENST00000332512 SSFA2P28290 1259 aa16.63■□□□□ 0.25
RIPK4-201ENST00000332512 NEK4P51957 841 aa16.63■□□□□ 0.25
RIPK4-201ENST00000332512 TNPO1Q92973 898 aaKnown RBP16.63■□□□□ 0.25
RIPK4-201ENST00000332512 CDC45O75419 566 aa16.63■□□□□ 0.25
RIPK4-201ENST00000332512 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
RIPK4-201ENST00000332512 A0A0G2JS52 829 aa16.62■□□□□ 0.25
RIPK4-201ENST00000332512 AMPHP49418 695 aa16.62■□□□□ 0.25
RIPK4-201ENST00000332512 GNAI1P63096 354 aa16.62■□□□□ 0.25
RIPK4-201ENST00000332512 FKBP5Q13451 457 aaPredicted RBP16.61■□□□□ 0.25
RIPK4-201ENST00000332512 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
RIPK4-201ENST00000332512 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
RIPK4-201ENST00000332512 API5Q9BZZ5 524 aaKnown RBP16.61■□□□□ 0.25
RIPK4-201ENST00000332512 KDM5BQ9UGL1 1544 aa16.61■□□□□ 0.25
RIPK4-201ENST00000332512 RRAGDQ9NQL2 400 aaPredicted RBP16.61■□□□□ 0.25
RIPK4-201ENST00000332512 CDK19Q9BWU1 502 aa16.61■□□□□ 0.25
RIPK4-201ENST00000332512 NGDNQ8NEJ9 315 aaKnown RBP16.6■□□□□ 0.25
RIPK4-201ENST00000332512 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
RIPK4-201ENST00000332512 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
RIPK4-201ENST00000332512 FAM83GA6ND36 823 aa16.6■□□□□ 0.25
RIPK4-201ENST00000332512 KIAA2012Q0VF49 1180 aa16.6■□□□□ 0.25
RIPK4-201ENST00000332512 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
RIPK4-201ENST00000332512 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
RIPK4-201ENST00000332512 TSHZ3Q63HK5 1081 aa16.59■□□□□ 0.25
RIPK4-201ENST00000332512 SULT6B1Q6IMI4 303 aa16.59■□□□□ 0.25
RIPK4-201ENST00000332512 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
RIPK4-201ENST00000332512 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
RIPK4-201ENST00000332512 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.25
RIPK4-201ENST00000332512 A2MP01023 1474 aa16.58■□□□□ 0.24
RIPK4-201ENST00000332512 DISP1Q96F81 1524 aa16.58■□□□□ 0.24
RIPK4-201ENST00000332512 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
RIPK4-201ENST00000332512 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.24
RIPK4-201ENST00000332512 DNMT1P26358 1616 aaKnown RBP16.57■□□□□ 0.24
RIPK4-201ENST00000332512 REC8O95072 547 aa16.57■□□□□ 0.24
RIPK4-201ENST00000332512 PTMSP20962 102 aa16.57■□□□□ 0.24
RIPK4-201ENST00000332512 AAMPQ13685 434 aa16.57■□□□□ 0.24
RIPK4-201ENST00000332512 CCDC27Q2M243 656 aa16.57■□□□□ 0.24
RIPK4-201ENST00000332512 SCAF11Q99590 1463 aaKnown RBP16.57■□□□□ 0.24
RIPK4-201ENST00000332512 KIF14Q15058 1648 aa16.57■□□□□ 0.24
RIPK4-201ENST00000332512 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
RIPK4-201ENST00000332512 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms